RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W MTC1P47018 478 aaKnown RBP14.78□□□□□ -0.04
CST9YLR394W FAP1P53971 965 aa13.92□□□□□ -0.18
CST9YLR394W DRS1P32892 752 aaKnown RBP13.22□□□□□ -0.29
CST9YLR394W PRY3P47033 881 aa13.1□□□□□ -0.31
CST9YLR394W PRI1P10363 409 aa12.79□□□□□ -0.36
CST9YLR394W AAD16Q02895 342 aa12.79□□□□□ -0.36
CST9YLR394W ISW2Q08773 1120 aa12.39□□□□□ -0.43
CST9YLR394W YCK3P39962 524 aa12.37□□□□□ -0.43
CST9YLR394W HAA1Q12753 694 aaKnown RBP12.3□□□□□ -0.44
CST9YLR394W RPG1P38249 964 aaKnown RBP12.25□□□□□ -0.45
CST9YLR394W TSR3Q12094 313 aaKnown RBP12.03□□□□□ -0.48
CST9YLR394W DIP2Q12220 943 aaPredicted RBP11.81□□□□□ -0.52
CST9YLR394W RSE1Q04693 1361 aaKnown RBP11.59□□□□□ -0.55
CST9YLR394W MRPL32P25348 183 aa11.59□□□□□ -0.55
CST9YLR394W YGL015CP33199 130 aa11.29□□□□□ -0.6
CST9YLR394W REB1P21538 810 aa11.25□□□□□ -0.61
CST9YLR394W RPL17AP05740 184 aaKnown RBP11.23□□□□□ -0.61
CST9YLR394W AVT3P36062 692 aa11.23□□□□□ -0.61
CST9YLR394W RPL17BP46990 184 aaKnown RBP11.23□□□□□ -0.61
CST9YLR394W CDC27P38042 758 aa10.89□□□□□ -0.67
CST9YLR394W YKR023WP36119 530 aaKnown RBP10.74□□□□□ -0.69
CST9YLR394W SPT21P35209 758 aa10.73□□□□□ -0.69
CST9YLR394W BFR2Q06631 534 aaKnown RBP10.71□□□□□ -0.69
CST9YLR394W UBP10P53874 792 aaPredicted RBP10.69□□□□□ -0.7
CST9YLR394W MAP2P38174 421 aaKnown RBP10.61□□□□□ -0.71
CST9YLR394W BUD31P25337 157 aaPredicted RBP10.58□□□□□ -0.72
CST9YLR394W TFC8Q12308 588 aa10.52□□□□□ -0.73
CST9YLR394W HOP09932 586 aa10.49□□□□□ -0.73
CST9YLR394W DCD1P06773 312 aa10.45□□□□□ -0.74
CST9YLR394W SCY1P53009 804 aa10.31□□□□□ -0.76
CST9YLR394W TIF4632P39936 914 aaKnown RBP10.25□□□□□ -0.77
CST9YLR394W RIM101P33400 625 aa10.24□□□□□ -0.77
CST9YLR394W TGL3P40308 642 aa10.24□□□□□ -0.77
CST9YLR394W SLX5P32828 619 aaKnown RBP10.22□□□□□ -0.77
CST9YLR394W BCH2P36122 765 aa10.15□□□□□ -0.79
CST9YLR394W UBP9P39967 754 aa10.09□□□□□ -0.79
CST9YLR394W SIS1P25294 352 aaKnown RBP10.01□□□□□ -0.81
CST9YLR394W OXP1P28273 1286 aa9.85□□□□□ -0.83
CST9YLR394W EPS1P40557 701 aa9.85□□□□□ -0.83
CST9YLR394W BDF1P35817 686 aa9.83□□□□□ -0.84
CST9YLR394W MST1P07236 462 aa9.73□□□□□ -0.85
CST9YLR394W PTP3P40048 928 aa9.73□□□□□ -0.85
CST9YLR394W YIL055CP40523 627 aaKnown RBP9.72□□□□□ -0.85
CST9YLR394W YOR238WQ08634 303 aa9.67□□□□□ -0.86
CST9YLR394W NSR1P27476 414 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
CST9YLR394W YBL029C-AQ3E756 94 aa9.63□□□□□ -0.87
CST9YLR394W BBC1P47068 1157 aa9.6□□□□□ -0.87
CST9YLR394W RSM7P47150 247 aa9.58□□□□□ -0.88
CST9YLR394W AI2P03876 854 aa9.54□□□□□ -0.88
CST9YLR394W YAP5P40574 245 aa9.52□□□□□ -0.89
CST9YLR394W VNX1P42839 908 aa9.52□□□□□ -0.89
CST9YLR394W YAH1Q12184 172 aaKnown RBP9.46□□□□□ -0.9
CST9YLR394W SPP1Q03012 353 aa9.44□□□□□ -0.9
CST9YLR394W WSC3Q12215 556 aa9.39□□□□□ -0.91
CST9YLR394W TIF11P38912 153 aaKnown RBP9.31□□□□□ -0.92
CST9YLR394W GTT3P39996 337 aa9.31□□□□□ -0.92
CST9YLR394W YLR271WQ06152 274 aa9.31□□□□□ -0.92
CST9YLR394W TFA1P36100 482 aa9.29□□□□□ -0.92
CST9YLR394W AIR2Q12476 344 aaKnown RBP9.29□□□□□ -0.92
CST9YLR394W FKH1P40466 484 aa9.27□□□□□ -0.93
CST9YLR394W PSD2P53037 1138 aaKnown RBP9.25□□□□□ -0.93
CST9YLR394W YJL171CP46992 396 aa9.23□□□□□ -0.93
CST9YLR394W ULI1P43604 169 aa9.16□□□□□ -0.94
CST9YLR394W PIB1Q06651 286 aa9.16□□□□□ -0.94
CST9YLR394W IOC2Q12072 812 aa9.16□□□□□ -0.94
CST9YLR394W LDB19Q12502 818 aa9.16□□□□□ -0.94
CST9YLR394W MRM1P25270 412 aa9.15□□□□□ -0.94
CST9YLR394W MSB4Q12317 492 aa9.1□□□□□ -0.95
CST9YLR394W BMT6Q12291 365 aa9.07□□□□□ -0.96
CST9YLR394W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.07□□□□□ -0.96not detected
CST9YLR394W EAP1P36041 632 aaKnown RBP9.06□□□□□ -0.96
CST9YLR394W SSP1P38871 571 aa9.05□□□□□ -0.96
CST9YLR394W YMR1P47147 688 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
CST9YLR394W YOL036WQ08206 761 aa9□□□□□ -0.97
CST9YLR394W SET4P42948 560 aa8.98□□□□□ -0.97
CST9YLR394W VPS29P38759 282 aa8.97□□□□□ -0.97
CST9YLR394W TRP5P00931 707 aaKnown RBP8.97□□□□□ -0.97
CST9YLR394W DBP1P24784 617 aaKnown RBP8.97□□□□□ -0.97
CST9YLR394W RTG1P32607 177 aa8.97□□□□□ -0.97
CST9YLR394W RTG3P38165 486 aa8.95□□□□□ -0.98
CST9YLR394W CST9Q06032 482 aa8.94□□□□□ -0.98
CST9YLR394W NCR1Q12200 1170 aa8.93□□□□□ -0.98
CST9YLR394W VMA1P17255 1071 aaKnown RBP8.91□□□□□ -0.98
CST9YLR394W MGA2P40578 1113 aa8.91□□□□□ -0.98
CST9YLR394W YFR006WP43590 535 aa8.91□□□□□ -0.98
CST9YLR394W YNL035CP53962 389 aaKnown RBP8.9□□□□□ -0.98
CST9YLR394W SEC61P32915 480 aa8.89□□□□□ -0.99
CST9YLR394W SAM3Q08986 587 aa8.89□□□□□ -0.99
CST9YLR394W STS1P38637 319 aa8.88□□□□□ -0.99
CST9YLR394W RCR1P38212 213 aa8.78□□□□□ -1
CST9YLR394W TFG1P41895 735 aaPredicted RBP8.78□□□□□ -1
CST9YLR394W ABP1P15891 592 aaKnown RBP8.77□□□□□ -1.01
CST9YLR394W DAN4P47179 1161 aa8.76□□□□□ -1.01
CST9YLR394W JIP4Q03361 876 aa8.76□□□□□ -1.01
CST9YLR394W GYP5Q12344 894 aa8.73□□□□□ -1.01
CST9YLR394W SAP30P38429 201 aa8.71□□□□□ -1.02
CST9YLR394W HTA1P04911 132 aaKnown RBP8.69□□□□□ -1.02
CST9YLR394W HTA2P04912 132 aa8.69□□□□□ -1.02
CST9YLR394W YDL129WQ07555 291 aa8.68□□□□□ -1.02
CST9YLR394W DCW1P36091 449 aa8.65□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms