RNA–Protein interactions for RNA: YKL141W

SDH3, Transcript of Subunit of succinate dehydrogenase and of TIM22 translocase, yeastyeast

Gene SDH3, Length 597 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH3YKL141W TY1A-ML1Q04706 440 aaKnown RBP7.85□□□□□ -1.15
SDH3YKL141W TY1A-BRQ12217 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-NL2Q12470 440 aa7.85□□□□□ -1.15
SDH3YKL141W TY1A-GR2Q12485 440 aa7.85□□□□□ -1.15
SDH3YKL141W SEC2P17065 759 aa7.83□□□□□ -1.16
SDH3YKL141W SPT16P32558 1035 aaKnown RBP7.83□□□□□ -1.16
SDH3YKL141W CST6P40535 587 aa7.83□□□□□ -1.16
SDH3YKL141W RGR1P19263 1082 aa7.82□□□□□ -1.16
SDH3YKL141W YPR109WQ06104 294 aa7.82□□□□□ -1.16
SDH3YKL141W LAM6Q08001 693 aa7.79□□□□□ -1.16
SDH3YKL141W AIR1P40507 360 aaKnown RBP7.78□□□□□ -1.16
SDH3YKL141W RRN7P40992 514 aa7.76□□□□□ -1.17
SDH3YKL141W BRE2P43132 505 aa7.76□□□□□ -1.17
SDH3YKL141W CLA4P48562 842 aa7.76□□□□□ -1.17
SDH3YKL141W PAT1P25644 796 aaKnown RBP7.75□□□□□ -1.17
SDH3YKL141W CKB1P43639 278 aa7.74□□□□□ -1.17
SDH3YKL141W FRK1Q03002 865 aaPredicted RBP7.74□□□□□ -1.17
SDH3YKL141W GCR2Q01722 534 aa7.73□□□□□ -1.17
SDH3YKL141W PBS2P08018 668 aa7.71□□□□□ -1.18
SDH3YKL141W BDP1P46678 594 aa7.71□□□□□ -1.18
SDH3YKL141W CDC4P07834 779 aa7.7□□□□□ -1.18
SDH3YKL141W KEX2P13134 814 aa7.7□□□□□ -1.18
SDH3YKL141W PSE1P32337 1089 aaKnown RBP7.7□□□□□ -1.18
SDH3YKL141W YPL062WQ02781 134 aa7.69□□□□□ -1.18
SDH3YKL141W ERF2Q06551 359 aa7.68□□□□□ -1.18
SDH3YKL141W HED1Q03937 162 aa7.66□□□□□ -1.18
SDH3YKL141W CLB5P30283 435 aa7.65□□□□□ -1.18
SDH3YKL141W GAR1P28007 205 aaKnown RBP7.63□□□□□ -1.19
SDH3YKL141W MAM3Q12296 706 aa7.62□□□□□ -1.19
SDH3YKL141W PAC1P39946 494 aaKnown RBP7.61□□□□□ -1.19
SDH3YKL141W MOD5P07884 428 aa7.6□□□□□ -1.19
SDH3YKL141W GBP2P25555 427 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19not detected
SDH3YKL141W RTF1P53064 558 aa7.59□□□□□ -1.19
SDH3YKL141W TUB4P53378 473 aa7.59□□□□□ -1.19
SDH3YKL141W AGE1Q04412 482 aa7.59□□□□□ -1.19
SDH3YKL141W DSF2P38213 736 aa7.57□□□□□ -1.2
SDH3YKL141W MET22P32179 357 aa7.56□□□□□ -1.2
SDH3YKL141W YNL115CP53925 644 aa7.56□□□□□ -1.2
SDH3YKL141W IES2P40154 320 aa7.55□□□□□ -1.2
SDH3YKL141W ENV9Q08651 330 aa7.55□□□□□ -1.2
SDH3YKL141W MET32Q12041 191 aa7.54□□□□□ -1.2
SDH3YKL141W SAS10Q12136 610 aaPredicted RBP7.54□□□□□ -1.2
SDH3YKL141W SIT4P20604 311 aa7.53□□□□□ -1.2
SDH3YKL141W ASH1P34233 588 aa7.53□□□□□ -1.2
SDH3YKL141W AFT1P22149 690 aa7.52□□□□□ -1.21
SDH3YKL141W TEA1P47988 759 aa7.52□□□□□ -1.21
SDH3YKL141W PUS5Q06244 254 aa7.52□□□□□ -1.21
SDH3YKL141W NUP42P49686 430 aaKnown RBP7.51□□□□□ -1.21
SDH3YKL141W HST3P53687 447 aa7.5□□□□□ -1.21
SDH3YKL141W YDR444WQ04093 687 aa7.49□□□□□ -1.21
SDH3YKL141W NIS1P53939 407 aa7.48□□□□□ -1.21
SDH3YKL141W KXD1P53158 218 aa7.47□□□□□ -1.21
SDH3YKL141W TPD3P31383 635 aa7.46□□□□□ -1.22
SDH3YKL141W LCB5Q06147 687 aaKnown RBP7.44□□□□□ -1.22
SDH3YKL141W DIT2P21595 489 aa7.43□□□□□ -1.22
SDH3YKL141W SPB4P25808 606 aaPredicted RBP7.43□□□□□ -1.22
SDH3YKL141W DMA1P38823 416 aa7.43□□□□□ -1.22
SDH3YKL141W HXT10P43581 546 aa7.43□□□□□ -1.22
SDH3YKL141W RRD1P40454 393 aaKnown RBP7.42□□□□□ -1.22
SDH3YKL141W YJR115WP47152 169 aa7.41□□□□□ -1.22
SDH3YKL141W FPK1P53739 893 aa7.41□□□□□ -1.22
SDH3YKL141W PDC1P06169 563 aaKnown RBP7.4□□□□□ -1.22
SDH3YKL141W SLY41P22215 453 aa7.4□□□□□ -1.22
SDH3YKL141W SYH1Q02875 849 aaKnown RBP7.4□□□□□ -1.22
SDH3YKL141W MSB3P48566 633 aaPredicted RBP7.38□□□□□ -1.23
SDH3YKL141W YMR196WQ04336 1088 aa7.38□□□□□ -1.23
SDH3YKL141W YDL176WQ12027 708 aa7.37□□□□□ -1.23
SDH3YKL141W RPA14P50106 137 aa7.35□□□□□ -1.23
SDH3YKL141W PUS6P53294 404 aa7.35□□□□□ -1.23
SDH3YKL141W ALR1Q08269 859 aa7.35□□□□□ -1.23
SDH3YKL141W TBF1Q02457 562 aa7.34□□□□□ -1.23
SDH3YKL141W YPR097WQ06839 1073 aa7.34□□□□□ -1.23
SDH3YKL141W YDL206WQ12424 762 aa7.33□□□□□ -1.24
SDH3YKL141W UGA3P26370 528 aa7.31□□□□□ -1.24
SDH3YKL141W KIP2P28743 706 aa7.31□□□□□ -1.24
SDH3YKL141W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
SDH3YKL141W HST2P53686 357 aa7.31□□□□□ -1.24
SDH3YKL141W SCJ1P25303 377 aa7.3□□□□□ -1.24
SDH3YKL141W IXR1P33417 597 aa7.29□□□□□ -1.24
SDH3YKL141W TRM1P15565 570 aaKnown RBP7.28□□□□□ -1.24
SDH3YKL141W PTK2P47116 818 aaKnown RBP7.28□□□□□ -1.24
SDH3YKL141W MRT4P33201 236 aaKnown RBP7.27□□□□□ -1.25
SDH3YKL141W MMP1Q12372 583 aa7.27□□□□□ -1.25
SDH3YKL141W SRF1Q12516 437 aa7.26□□□□□ -1.25
SDH3YKL141W RTT106P40161 455 aa7.25□□□□□ -1.25
SDH3YKL141W ATF2P53296 535 aa7.25□□□□□ -1.25
SDH3YKL141W YLR346CQ06139 101 aa7.25□□□□□ -1.25
SDH3YKL141W GLN1P32288 370 aaKnown RBP7.24□□□□□ -1.25
SDH3YKL141W ACO2P39533 789 aa7.24□□□□□ -1.25
SDH3YKL141W OPT2Q06593 877 aa7.24□□□□□ -1.25
SDH3YKL141W CAF120P53836 1060 aa7.23□□□□□ -1.25
SDH3YKL141W NUP85P46673 744 aa7.21□□□□□ -1.26
SDH3YKL141W ESS1P22696 170 aa7.2□□□□□ -1.26
SDH3YKL141W GLY1P37303 387 aaKnown RBP7.2□□□□□ -1.26
SDH3YKL141W TYW1Q08960 810 aaKnown RBP7.19□□□□□ -1.26
SDH3YKL141W VAC17P25591 423 aa7.18□□□□□ -1.26
SDH3YKL141W YNR021WP53723 404 aaKnown RBP7.18□□□□□ -1.26
SDH3YKL141W YJU3P28321 313 aa7.16□□□□□ -1.26
SDH3YKL141W MIP1P15801 1254 aa7.15□□□□□ -1.26
SDH3YKL141W GLC3P32775 704 aa7.15□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms