RNA–Protein interactions for RNA: YKL141W

SDH3, Transcript of Subunit of succinate dehydrogenase and of TIM22 translocase, yeastyeast

Gene SDH3, Length 597 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH3YKL141W MTC1P47018 478 aaKnown RBP15.29■□□□□ 0.04
SDH3YKL141W FAP1P53971 965 aa14.18□□□□□ -0.14
SDH3YKL141W DRS1P32892 752 aaKnown RBP13.9□□□□□ -0.18
SDH3YKL141W PRY3P47033 881 aa13.33□□□□□ -0.28
SDH3YKL141W PRI1P10363 409 aa13.11□□□□□ -0.31
SDH3YKL141W AAD16Q02895 342 aa13.08□□□□□ -0.32
SDH3YKL141W ISW2Q08773 1120 aa12.78□□□□□ -0.36
SDH3YKL141W RPG1P38249 964 aaKnown RBP12.64□□□□□ -0.39
SDH3YKL141W YCK3P39962 524 aa12.57□□□□□ -0.4
SDH3YKL141W HAA1Q12753 694 aaKnown RBP12.53□□□□□ -0.4
SDH3YKL141W TSR3Q12094 313 aaKnown RBP12.35□□□□□ -0.43
SDH3YKL141W DIP2Q12220 943 aaPredicted RBP12.33□□□□□ -0.44
SDH3YKL141W RSE1Q04693 1361 aaKnown RBP12.04□□□□□ -0.48
SDH3YKL141W MRPL32P25348 183 aa11.9□□□□□ -0.5
SDH3YKL141W AVT3P36062 692 aa11.78□□□□□ -0.52
SDH3YKL141W RPL17AP05740 184 aaKnown RBP11.66□□□□□ -0.54
SDH3YKL141W RPL17BP46990 184 aaKnown RBP11.66□□□□□ -0.54
SDH3YKL141W REB1P21538 810 aa11.65□□□□□ -0.54
SDH3YKL141W YGL015CP33199 130 aa11.53□□□□□ -0.56
SDH3YKL141W BFR2Q06631 534 aaKnown RBP11.38□□□□□ -0.59
SDH3YKL141W CDC27P38042 758 aa11.21□□□□□ -0.61
SDH3YKL141W SPT21P35209 758 aa11.14□□□□□ -0.63
SDH3YKL141W YKR023WP36119 530 aaKnown RBP11.1□□□□□ -0.63
SDH3YKL141W UBP10P53874 792 aaPredicted RBP10.97□□□□□ -0.65
SDH3YKL141W MAP2P38174 421 aaKnown RBP10.91□□□□□ -0.66
SDH3YKL141W TFC8Q12308 588 aa10.88□□□□□ -0.67
SDH3YKL141W HOP09932 586 aa10.86□□□□□ -0.67
SDH3YKL141W DCD1P06773 312 aa10.81□□□□□ -0.68
SDH3YKL141W BUD31P25337 157 aaPredicted RBP10.72□□□□□ -0.69
SDH3YKL141W RIM101P33400 625 aa10.68□□□□□ -0.7
SDH3YKL141W SCY1P53009 804 aa10.63□□□□□ -0.71
SDH3YKL141W TIF4632P39936 914 aaKnown RBP10.54□□□□□ -0.72
SDH3YKL141W SLX5P32828 619 aaKnown RBP10.53□□□□□ -0.72
SDH3YKL141W BCH2P36122 765 aa10.5□□□□□ -0.73
SDH3YKL141W TGL3P40308 642 aa10.5□□□□□ -0.73
SDH3YKL141W OXP1P28273 1286 aa10.29□□□□□ -0.76
SDH3YKL141W UBP9P39967 754 aa10.29□□□□□ -0.76
SDH3YKL141W EPS1P40557 701 aa10.22□□□□□ -0.77
SDH3YKL141W BDF1P35817 686 aa10.18□□□□□ -0.78
SDH3YKL141W SIS1P25294 352 aaKnown RBP10.17□□□□□ -0.78
SDH3YKL141W PTP3P40048 928 aa10.16□□□□□ -0.78
SDH3YKL141W YIL055CP40523 627 aaKnown RBP10.16□□□□□ -0.78
SDH3YKL141W MST1P07236 462 aa10.01□□□□□ -0.81
SDH3YKL141W RSM7P47150 247 aa10.01□□□□□ -0.81
SDH3YKL141W BBC1P47068 1157 aa10□□□□□ -0.81
SDH3YKL141W YOR238WQ08634 303 aa9.96□□□□□ -0.82
SDH3YKL141W AI2P03876 854 aa9.95□□□□□ -0.82
SDH3YKL141W NSR1P27476 414 aaKnown RBP RIP-Chip data9.93□□□□□ -0.82not detected
SDH3YKL141W YAH1Q12184 172 aaKnown RBP9.93□□□□□ -0.82
SDH3YKL141W TFA1P36100 482 aa9.89□□□□□ -0.83
SDH3YKL141W YBL029C-AQ3E756 94 aa9.88□□□□□ -0.83
SDH3YKL141W YAP5P40574 245 aa9.84□□□□□ -0.83
SDH3YKL141W VNX1P42839 908 aa9.77□□□□□ -0.85
SDH3YKL141W YLR271WQ06152 274 aa9.76□□□□□ -0.85
SDH3YKL141W SPP1Q03012 353 aa9.7□□□□□ -0.86
SDH3YKL141W WSC3Q12215 556 aa9.68□□□□□ -0.86
SDH3YKL141W PSD2P53037 1138 aaKnown RBP9.67□□□□□ -0.86
SDH3YKL141W GTT3P39996 337 aa9.62□□□□□ -0.87
SDH3YKL141W TIF11P38912 153 aaKnown RBP9.59□□□□□ -0.87
SDH3YKL141W MRM1P25270 412 aa9.56□□□□□ -0.88
SDH3YKL141W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.56□□□□□ -0.88not detected
SDH3YKL141W SSP1P38871 571 aa9.55□□□□□ -0.88
SDH3YKL141W PIB1Q06651 286 aa9.51□□□□□ -0.89
SDH3YKL141W AIR2Q12476 344 aaKnown RBP9.51□□□□□ -0.89
SDH3YKL141W FKH1P40466 484 aa9.49□□□□□ -0.89
SDH3YKL141W ULI1P43604 169 aa9.45□□□□□ -0.9
SDH3YKL141W YJL171CP46992 396 aa9.45□□□□□ -0.9
SDH3YKL141W LDB19Q12502 818 aa9.43□□□□□ -0.9
SDH3YKL141W IOC2Q12072 812 aa9.42□□□□□ -0.9
SDH3YKL141W MSB4Q12317 492 aa9.4□□□□□ -0.9
SDH3YKL141W YMR1P47147 688 aaKnown RBP RIP-Chip data9.39□□□□□ -0.91not detected
SDH3YKL141W MGA2P40578 1113 aa9.38□□□□□ -0.91
SDH3YKL141W CST9Q06032 482 aa9.38□□□□□ -0.91
SDH3YKL141W EAP1P36041 632 aaKnown RBP9.36□□□□□ -0.91
SDH3YKL141W VPS29P38759 282 aa9.36□□□□□ -0.91
SDH3YKL141W RTG3P38165 486 aa9.35□□□□□ -0.91
SDH3YKL141W DBP1P24784 617 aaKnown RBP9.33□□□□□ -0.92
SDH3YKL141W YOL036WQ08206 761 aa9.32□□□□□ -0.92
SDH3YKL141W SET4P42948 560 aa9.3□□□□□ -0.92
SDH3YKL141W BMT6Q12291 365 aa9.3□□□□□ -0.92
SDH3YKL141W YFR006WP43590 535 aa9.29□□□□□ -0.92
SDH3YKL141W TRP5P00931 707 aaKnown RBP9.26□□□□□ -0.93
SDH3YKL141W VMA1P17255 1071 aaKnown RBP9.26□□□□□ -0.93
SDH3YKL141W STS1P38637 319 aa9.26□□□□□ -0.93
SDH3YKL141W RTG1P32607 177 aa9.24□□□□□ -0.93
SDH3YKL141W SAM3Q08986 587 aa9.23□□□□□ -0.93
SDH3YKL141W RCR1P38212 213 aa9.19□□□□□ -0.94
SDH3YKL141W YNL035CP53962 389 aaKnown RBP9.19□□□□□ -0.94
SDH3YKL141W NCR1Q12200 1170 aa9.19□□□□□ -0.94
SDH3YKL141W SEC61P32915 480 aa9.17□□□□□ -0.94
SDH3YKL141W ABP1P15891 592 aaKnown RBP9.1□□□□□ -0.95
SDH3YKL141W GYP5Q12344 894 aa9.08□□□□□ -0.96
SDH3YKL141W TFG1P41895 735 aaPredicted RBP9.07□□□□□ -0.96
SDH3YKL141W DAN4P47179 1161 aa9.06□□□□□ -0.96
SDH3YKL141W JIP4Q03361 876 aa9.06□□□□□ -0.96
SDH3YKL141W HTA1P04911 132 aaKnown RBP9.02□□□□□ -0.97
SDH3YKL141W HTA2P04912 132 aa9.02□□□□□ -0.97
SDH3YKL141W DCW1P36091 449 aa8.99□□□□□ -0.97
SDH3YKL141W SAP30P38429 201 aa8.98□□□□□ -0.97
SDH3YKL141W PTC4P38089 393 aa8.97□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms