RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W TY1A-GR2Q12485 440 aa5.33□□□□□ -1.56
RPL40AYIL148W SEC2P17065 759 aa5.32□□□□□ -1.56
RPL40AYIL148W LAM6Q08001 693 aa5.32□□□□□ -1.56
RPL40AYIL148W GCD11P32481 527 aaKnown RBP5.3□□□□□ -1.56
RPL40AYIL148W NPL4P33755 580 aa5.3□□□□□ -1.56
RPL40AYIL148W ORC6P38826 435 aa5.3□□□□□ -1.56
RPL40AYIL148W GCR2Q01722 534 aa5.3□□□□□ -1.56
RPL40AYIL148W SPT16P32558 1035 aaKnown RBP5.29□□□□□ -1.56
RPL40AYIL148W FRK1Q03002 865 aaPredicted RBP5.29□□□□□ -1.56
RPL40AYIL148W GBP2P25555 427 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
RPL40AYIL148W REF2P42073 533 aaPredicted RBP5.27□□□□□ -1.57
RPL40AYIL148W IFH1P39520 1085 aa5.26□□□□□ -1.57
RPL40AYIL148W BDP1P46678 594 aa5.26□□□□□ -1.57
RPL40AYIL148W CDC4P07834 779 aa5.25□□□□□ -1.57
RPL40AYIL148W MVP1P40959 511 aaKnown RBP5.25□□□□□ -1.57
RPL40AYIL148W RRN7P40992 514 aa5.25□□□□□ -1.57
RPL40AYIL148W MET22P32179 357 aa5.23□□□□□ -1.57
RPL40AYIL148W YPR148CQ06523 435 aa5.23□□□□□ -1.57
RPL40AYIL148W YPR109WQ06104 294 aa5.21□□□□□ -1.58
RPL40AYIL148W RGR1P19263 1082 aa5.2□□□□□ -1.58
RPL40AYIL148W COX6P00427 148 aa5.19□□□□□ -1.58
RPL40AYIL148W HED1Q03937 162 aa5.19□□□□□ -1.58
RPL40AYIL148W ERF2Q06551 359 aa5.19□□□□□ -1.58
RPL40AYIL148W ENV9Q08651 330 aa5.19□□□□□ -1.58
RPL40AYIL148W KEX2P13134 814 aa5.17□□□□□ -1.58
RPL40AYIL148W PAT1P25644 796 aaKnown RBP5.17□□□□□ -1.58
RPL40AYIL148W VPS70P47161 811 aa5.17□□□□□ -1.58
RPL40AYIL148W YDR444WQ04093 687 aa5.16□□□□□ -1.58
RPL40AYIL148W MAK21Q12176 1025 aaKnown RBP5.16□□□□□ -1.58
RPL40AYIL148W MET32Q12041 191 aa5.15□□□□□ -1.59
RPL40AYIL148W ASH1P34233 588 aa5.14□□□□□ -1.59
RPL40AYIL148W PAC1P39946 494 aaKnown RBP5.14□□□□□ -1.59
RPL40AYIL148W MOD5P07884 428 aa5.12□□□□□ -1.59
RPL40AYIL148W YDL176WQ12027 708 aa5.12□□□□□ -1.59
RPL40AYIL148W LCB5Q06147 687 aaKnown RBP5.11□□□□□ -1.59
RPL40AYIL148W PUS5Q06244 254 aa5.11□□□□□ -1.59
RPL40AYIL148W AGE1Q04412 482 aa5.1□□□□□ -1.59
RPL40AYIL148W AFT1P22149 690 aa5.09□□□□□ -1.59
RPL40AYIL148W TUB4P53378 473 aa5.08□□□□□ -1.6
RPL40AYIL148W HST3P53687 447 aa5.08□□□□□ -1.6
RPL40AYIL148W RRD1P40454 393 aaKnown RBP5.06□□□□□ -1.6
RPL40AYIL148W DMA1P38823 416 aa5.05□□□□□ -1.6
RPL40AYIL148W YJR115WP47152 169 aa5.05□□□□□ -1.6
RPL40AYIL148W PSE1P32337 1089 aaKnown RBP5.03□□□□□ -1.6
RPL40AYIL148W RTF1P53064 558 aa5□□□□□ -1.61
RPL40AYIL148W YNL115CP53925 644 aa5□□□□□ -1.61
RPL40AYIL148W PBS2P08018 668 aa4.99□□□□□ -1.61
RPL40AYIL148W CLB5P30283 435 aa4.99□□□□□ -1.61
RPL40AYIL148W CAF120P53836 1060 aa4.97□□□□□ -1.61
RPL40AYIL148W SIT4P20604 311 aa4.96□□□□□ -1.62
RPL40AYIL148W TPD3P31383 635 aa4.96□□□□□ -1.62
RPL40AYIL148W HXT10P43581 546 aa4.96□□□□□ -1.62
RPL40AYIL148W MSB3P48566 633 aaPredicted RBP4.96□□□□□ -1.62
RPL40AYIL148W KXD1P53158 218 aa4.96□□□□□ -1.62
RPL40AYIL148W ACO2P39533 789 aa4.95□□□□□ -1.62
RPL40AYIL148W SYH1Q02875 849 aaKnown RBP4.95□□□□□ -1.62
RPL40AYIL148W PDC1P06169 563 aaKnown RBP4.94□□□□□ -1.62
RPL40AYIL148W CKB1P43639 278 aa4.94□□□□□ -1.62
RPL40AYIL148W NIS1P53939 407 aa4.94□□□□□ -1.62
RPL40AYIL148W OPT2Q06593 877 aa4.94□□□□□ -1.62
RPL40AYIL148W UGA3P26370 528 aa4.93□□□□□ -1.62
RPL40AYIL148W PTK2P47116 818 aaKnown RBP4.93□□□□□ -1.62
RPL40AYIL148W MAM3Q12296 706 aa4.93□□□□□ -1.62
RPL40AYIL148W TEA1P47988 759 aa4.92□□□□□ -1.62
RPL40AYIL148W IES2P40154 320 aa4.9□□□□□ -1.63
RPL40AYIL148W MTC5Q03897 1148 aa4.9□□□□□ -1.63
RPL40AYIL148W SLY41P22215 453 aa4.89□□□□□ -1.63
RPL40AYIL148W SRF1Q12516 437 aa4.89□□□□□ -1.63
RPL40AYIL148W NUP42P49686 430 aaKnown RBP4.88□□□□□ -1.63
RPL40AYIL148W YLR346CQ06139 101 aa4.88□□□□□ -1.63
RPL40AYIL148W TRK2P28584 889 aa4.87□□□□□ -1.63
RPL40AYIL148W KIP2P28743 706 aa4.87□□□□□ -1.63
RPL40AYIL148W YIR007WP40566 764 aa4.87□□□□□ -1.63
RPL40AYIL148W YGR035CP53222 116 aa4.87□□□□□ -1.63
RPL40AYIL148W FPK1P53739 893 aa4.87□□□□□ -1.63
RPL40AYIL148W MRT4P33201 236 aaKnown RBP4.86□□□□□ -1.63
RPL40AYIL148W GLY1P37303 387 aaKnown RBP4.86□□□□□ -1.63
RPL40AYIL148W DSF2P38213 736 aa4.86□□□□□ -1.63
RPL40AYIL148W YDL206WQ12424 762 aa4.86□□□□□ -1.63
RPL40AYIL148W IXR1P33417 597 aa4.85□□□□□ -1.63
RPL40AYIL148W NUP85P46673 744 aa4.85□□□□□ -1.63
RPL40AYIL148W RPA14P50106 137 aa4.85□□□□□ -1.63
RPL40AYIL148W HPF1Q05164 967 aa4.85□□□□□ -1.63
RPL40AYIL148W YPR097WQ06839 1073 aa4.85□□□□□ -1.63
RPL40AYIL148W ALR1Q08269 859 aa4.85□□□□□ -1.63
RPL40AYIL148W TYW1Q08960 810 aaKnown RBP4.85□□□□□ -1.63
RPL40AYIL148W TY1A-BLQ12266 440 aa4.84□□□□□ -1.63
RPL40AYIL148W DIT2P21595 489 aa4.83□□□□□ -1.64
RPL40AYIL148W SCW11P53189 542 aa4.83□□□□□ -1.64
RPL40AYIL148W PUS6P53294 404 aa4.83□□□□□ -1.64
RPL40AYIL148W YMR196WQ04336 1088 aa4.83□□□□□ -1.64
RPL40AYIL148W MIP1P15801 1254 aa4.82□□□□□ -1.64
RPL40AYIL148W SCJ1P25303 377 aa4.82□□□□□ -1.64
RPL40AYIL148W TBF1Q02457 562 aa4.82□□□□□ -1.64
RPL40AYIL148W TRM1P15565 570 aaKnown RBP4.81□□□□□ -1.64
RPL40AYIL148W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
RPL40AYIL148W AAD14P42884 376 aa4.77□□□□□ -1.65
RPL40AYIL148W DLD1P32891 587 aa4.76□□□□□ -1.65
RPL40AYIL148W YBL086CP38177 466 aa4.76□□□□□ -1.65
RPL40AYIL148W RTT106P40161 455 aa4.76□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms