RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W MTC1P47018 478 aaKnown RBP10.62□□□□□ -0.71
RPL40AYIL148W FAP1P53971 965 aa10.2□□□□□ -0.78
RPL40AYIL148W PRY3P47033 881 aa9.62□□□□□ -0.87
RPL40AYIL148W DRS1P32892 752 aaKnown RBP9.36□□□□□ -0.91
RPL40AYIL148W AAD16Q02895 342 aa9.29□□□□□ -0.92
RPL40AYIL148W PRI1P10363 409 aa9.27□□□□□ -0.93
RPL40AYIL148W YCK3P39962 524 aa9.12□□□□□ -0.95
RPL40AYIL148W HAA1Q12753 694 aaKnown RBP8.96□□□□□ -0.98
RPL40AYIL148W ISW2Q08773 1120 aa8.9□□□□□ -0.98
RPL40AYIL148W RPG1P38249 964 aaKnown RBP8.86□□□□□ -0.99
RPL40AYIL148W TSR3Q12094 313 aaKnown RBP8.76□□□□□ -1.01
RPL40AYIL148W DIP2Q12220 943 aaPredicted RBP8.41□□□□□ -1.06
RPL40AYIL148W MRPL32P25348 183 aa8.37□□□□□ -1.07
RPL40AYIL148W RSE1Q04693 1361 aaKnown RBP8.27□□□□□ -1.09
RPL40AYIL148W YGL015CP33199 130 aa8.18□□□□□ -1.1
RPL40AYIL148W RPL17AP05740 184 aaKnown RBP8.06□□□□□ -1.12
RPL40AYIL148W REB1P21538 810 aa8.06□□□□□ -1.12
RPL40AYIL148W RPL17BP46990 184 aaKnown RBP8.06□□□□□ -1.12
RPL40AYIL148W AVT3P36062 692 aa7.95□□□□□ -1.14
RPL40AYIL148W CDC27P38042 758 aa7.91□□□□□ -1.14
RPL40AYIL148W BUD31P25337 157 aaPredicted RBP7.76□□□□□ -1.17
RPL40AYIL148W YKR023WP36119 530 aaKnown RBP7.74□□□□□ -1.17
RPL40AYIL148W MAP2P38174 421 aaKnown RBP7.71□□□□□ -1.18
RPL40AYIL148W UBP10P53874 792 aaPredicted RBP7.69□□□□□ -1.18
RPL40AYIL148W SPT21P35209 758 aa7.68□□□□□ -1.18
RPL40AYIL148W DCD1P06773 312 aa7.59□□□□□ -1.19
RPL40AYIL148W HOP09932 586 aa7.59□□□□□ -1.19
RPL40AYIL148W TFC8Q12308 588 aa7.57□□□□□ -1.2
RPL40AYIL148W BFR2Q06631 534 aaKnown RBP7.5□□□□□ -1.21
RPL40AYIL148W SCY1P53009 804 aa7.45□□□□□ -1.22
RPL40AYIL148W TIF4632P39936 914 aaKnown RBP7.38□□□□□ -1.23
RPL40AYIL148W SLX5P32828 619 aaKnown RBP7.37□□□□□ -1.23
RPL40AYIL148W TGL3P40308 642 aa7.36□□□□□ -1.23
RPL40AYIL148W SIS1P25294 352 aaKnown RBP7.32□□□□□ -1.24
RPL40AYIL148W BCH2P36122 765 aa7.31□□□□□ -1.24
RPL40AYIL148W UBP9P39967 754 aa7.29□□□□□ -1.24
RPL40AYIL148W RIM101P33400 625 aa7.28□□□□□ -1.24
RPL40AYIL148W BDF1P35817 686 aa7.07□□□□□ -1.28
RPL40AYIL148W EPS1P40557 701 aa7.07□□□□□ -1.28
RPL40AYIL148W OXP1P28273 1286 aa7.04□□□□□ -1.28
RPL40AYIL148W MST1P07236 462 aa7□□□□□ -1.29
RPL40AYIL148W YBL029C-AQ3E756 94 aa7□□□□□ -1.29
RPL40AYIL148W YOR238WQ08634 303 aa6.94□□□□□ -1.3
RPL40AYIL148W PTP3P40048 928 aa6.93□□□□□ -1.3
RPL40AYIL148W YIL055CP40523 627 aaKnown RBP6.89□□□□□ -1.31
RPL40AYIL148W VNX1P42839 908 aa6.89□□□□□ -1.31
RPL40AYIL148W NSR1P27476 414 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31 RIP-Chip
RPL40AYIL148W YAP5P40574 245 aa6.81□□□□□ -1.32
RPL40AYIL148W BBC1P47068 1157 aa6.81□□□□□ -1.32
RPL40AYIL148W RSM7P47150 247 aa6.81□□□□□ -1.32
RPL40AYIL148W SPP1Q03012 353 aa6.81□□□□□ -1.32
RPL40AYIL148W WSC3Q12215 556 aa6.81□□□□□ -1.32
RPL40AYIL148W AI2P03876 854 aa6.8□□□□□ -1.32
RPL40AYIL148W YAH1Q12184 172 aaKnown RBP6.75□□□□□ -1.33
RPL40AYIL148W AIR2Q12476 344 aaKnown RBP6.74□□□□□ -1.33
RPL40AYIL148W TIF11P38912 153 aaKnown RBP6.7□□□□□ -1.34
RPL40AYIL148W FKH1P40466 484 aa6.7□□□□□ -1.34
RPL40AYIL148W GTT3P39996 337 aa6.67□□□□□ -1.34
RPL40AYIL148W YJL171CP46992 396 aa6.67□□□□□ -1.34
RPL40AYIL148W PIB1Q06651 286 aa6.63□□□□□ -1.35
RPL40AYIL148W YLR271WQ06152 274 aa6.62□□□□□ -1.35
RPL40AYIL148W LDB19Q12502 818 aa6.62□□□□□ -1.35
RPL40AYIL148W ULI1P43604 169 aa6.6□□□□□ -1.35
RPL40AYIL148W IOC2Q12072 812 aa6.6□□□□□ -1.35
RPL40AYIL148W PSD2P53037 1138 aaKnown RBP6.58□□□□□ -1.36
RPL40AYIL148W BMT6Q12291 365 aa6.55□□□□□ -1.36
RPL40AYIL148W MRM1P25270 412 aa6.53□□□□□ -1.36
RPL40AYIL148W MSB4Q12317 492 aa6.48□□□□□ -1.37
RPL40AYIL148W SET4P42948 560 aa6.46□□□□□ -1.38
RPL40AYIL148W RTG1P32607 177 aa6.45□□□□□ -1.38
RPL40AYIL148W EAP1P36041 632 aaKnown RBP6.45□□□□□ -1.38
RPL40AYIL148W YOL036WQ08206 761 aa6.45□□□□□ -1.38
RPL40AYIL148W TRP5P00931 707 aaKnown RBP6.44□□□□□ -1.38
RPL40AYIL148W NCR1Q12200 1170 aa6.41□□□□□ -1.38
RPL40AYIL148W DBP1P24784 617 aaKnown RBP6.4□□□□□ -1.38
RPL40AYIL148W VPS29P38759 282 aa6.4□□□□□ -1.38
RPL40AYIL148W YFR006WP43590 535 aa6.39□□□□□ -1.39
RPL40AYIL148W YMR1P47147 688 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
RPL40AYIL148W TFA1P36100 482 aa6.38□□□□□ -1.39
RPL40AYIL148W YNL035CP53962 389 aaKnown RBP6.37□□□□□ -1.39
RPL40AYIL148W CST9Q06032 482 aa6.37□□□□□ -1.39
RPL40AYIL148W VMA1P17255 1071 aaKnown RBP6.36□□□□□ -1.39
RPL40AYIL148W STS1P38637 319 aa6.36□□□□□ -1.39
RPL40AYIL148W SSP1P38871 571 aa6.36□□□□□ -1.39
RPL40AYIL148W SEC61P32915 480 aa6.35□□□□□ -1.39
RPL40AYIL148W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
RPL40AYIL148W RTG3P38165 486 aa6.33□□□□□ -1.4
RPL40AYIL148W SAM3Q08986 587 aa6.33□□□□□ -1.4
RPL40AYIL148W RCR1P38212 213 aa6.28□□□□□ -1.4
RPL40AYIL148W DAN4P47179 1161 aa6.28□□□□□ -1.4
RPL40AYIL148W SAP30P38429 201 aa6.27□□□□□ -1.41
RPL40AYIL148W MGA2P40578 1113 aa6.27□□□□□ -1.41
RPL40AYIL148W TFG1P41895 735 aaPredicted RBP6.26□□□□□ -1.41
RPL40AYIL148W JIP4Q03361 876 aa6.23□□□□□ -1.41
RPL40AYIL148W GYP5Q12344 894 aa6.22□□□□□ -1.41
RPL40AYIL148W BCK2P33306 851 aa6.21□□□□□ -1.42
RPL40AYIL148W YDL129WQ07555 291 aa6.21□□□□□ -1.42
RPL40AYIL148W CHL1P22516 861 aaPredicted RBP6.19□□□□□ -1.42
RPL40AYIL148W DCW1P36091 449 aa6.19□□□□□ -1.42
RPL40AYIL148W HTA1P04911 132 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms