RNA–Protein interactions for RNA: YHR038W

RRF1, Transcript of Mitochondrial ribosome recycling factor, yeastyeast

Gene RRF1, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRF1YHR038W TY1A-ML1Q04706 440 aaKnown RBP8.76□□□□□ -1.01
RRF1YHR038W TY1A-BRQ12217 440 aa8.76□□□□□ -1.01
RRF1YHR038W TY1A-NL2Q12470 440 aa8.76□□□□□ -1.01
RRF1YHR038W TY1A-GR2Q12485 440 aa8.76□□□□□ -1.01
RRF1YHR038W GCD11P32481 527 aaKnown RBP8.75□□□□□ -1.01
RRF1YHR038W NPL4P33755 580 aa8.75□□□□□ -1.01
RRF1YHR038W FRK1Q03002 865 aaPredicted RBP8.73□□□□□ -1.01
RRF1YHR038W SPT16P32558 1035 aaKnown RBP8.72□□□□□ -1.01
RRF1YHR038W ORC6P38826 435 aa8.69□□□□□ -1.02
RRF1YHR038W CDC4P07834 779 aa8.67□□□□□ -1.02
RRF1YHR038W BDP1P46678 594 aa8.67□□□□□ -1.02
RRF1YHR038W RRN7P40992 514 aa8.66□□□□□ -1.02
RRF1YHR038W REF2P42073 533 aaPredicted RBP8.65□□□□□ -1.02
RRF1YHR038W MET22P32179 357 aa8.64□□□□□ -1.03
RRF1YHR038W IFH1P39520 1085 aa8.64□□□□□ -1.03
RRF1YHR038W MVP1P40959 511 aaKnown RBP8.62□□□□□ -1.03
RRF1YHR038W YPR109WQ06104 294 aa8.58□□□□□ -1.04
RRF1YHR038W HED1Q03937 162 aa8.57□□□□□ -1.04
RRF1YHR038W ENV9Q08651 330 aa8.57□□□□□ -1.04
RRF1YHR038W PAT1P25644 796 aaKnown RBP8.55□□□□□ -1.04
RRF1YHR038W YPR148CQ06523 435 aa8.55□□□□□ -1.04
RRF1YHR038W ERF2Q06551 359 aa8.54□□□□□ -1.04
RRF1YHR038W RGR1P19263 1082 aa8.53□□□□□ -1.04
RRF1YHR038W YDR444WQ04093 687 aa8.53□□□□□ -1.04
RRF1YHR038W COX6P00427 148 aa8.52□□□□□ -1.05
RRF1YHR038W KEX2P13134 814 aa8.52□□□□□ -1.05
RRF1YHR038W MET32Q12041 191 aa8.48□□□□□ -1.05
RRF1YHR038W ASH1P34233 588 aa8.47□□□□□ -1.05
RRF1YHR038W VPS70P47161 811 aa8.47□□□□□ -1.05
RRF1YHR038W PAC1P39946 494 aaKnown RBP8.46□□□□□ -1.06
RRF1YHR038W MAK21Q12176 1025 aaKnown RBP8.46□□□□□ -1.06
RRF1YHR038W YDL176WQ12027 708 aa8.45□□□□□ -1.06
RRF1YHR038W LCB5Q06147 687 aaKnown RBP8.44□□□□□ -1.06
RRF1YHR038W PUS5Q06244 254 aa8.43□□□□□ -1.06
RRF1YHR038W MOD5P07884 428 aa8.42□□□□□ -1.06
RRF1YHR038W AFT1P22149 690 aa8.41□□□□□ -1.06
RRF1YHR038W HST3P53687 447 aa8.4□□□□□ -1.06
RRF1YHR038W AGE1Q04412 482 aa8.38□□□□□ -1.07
RRF1YHR038W RRD1P40454 393 aaKnown RBP8.36□□□□□ -1.07
RRF1YHR038W TUB4P53378 473 aa8.36□□□□□ -1.07
RRF1YHR038W YJR115WP47152 169 aa8.33□□□□□ -1.08
RRF1YHR038W PSE1P32337 1089 aaKnown RBP8.25□□□□□ -1.09
RRF1YHR038W CAF120P53836 1060 aa8.23□□□□□ -1.09
RRF1YHR038W RTF1P53064 558 aa8.21□□□□□ -1.1
RRF1YHR038W YNL115CP53925 644 aa8.21□□□□□ -1.1
RRF1YHR038W PBS2P08018 668 aa8.19□□□□□ -1.1
RRF1YHR038W CLB5P30283 435 aa8.19□□□□□ -1.1
RRF1YHR038W MSB3P48566 633 aaPredicted RBP8.18□□□□□ -1.1
RRF1YHR038W KXD1P53158 218 aa8.18□□□□□ -1.1
RRF1YHR038W ACO2P39533 789 aa8.16□□□□□ -1.1
RRF1YHR038W HXT10P43581 546 aa8.15□□□□□ -1.1
RRF1YHR038W SYH1Q02875 849 aaKnown RBP8.15□□□□□ -1.1
RRF1YHR038W OPT2Q06593 877 aa8.15□□□□□ -1.1
RRF1YHR038W SIT4P20604 311 aa8.14□□□□□ -1.11
RRF1YHR038W TPD3P31383 635 aa8.14□□□□□ -1.11
RRF1YHR038W UGA3P26370 528 aa8.13□□□□□ -1.11
RRF1YHR038W MTC5Q03897 1148 aa8.13□□□□□ -1.11
RRF1YHR038W PDC1P06169 563 aaKnown RBP8.12□□□□□ -1.11
RRF1YHR038W PTK2P47116 818 aaKnown RBP8.12□□□□□ -1.11
RRF1YHR038W NIS1P53939 407 aa8.1□□□□□ -1.11
RRF1YHR038W SRF1Q12516 437 aa8.09□□□□□ -1.11
RRF1YHR038W MAM3Q12296 706 aa8.08□□□□□ -1.12
RRF1YHR038W TRK2P28584 889 aa8.07□□□□□ -1.12
RRF1YHR038W CKB1P43639 278 aa8.07□□□□□ -1.12
RRF1YHR038W TEA1P47988 759 aa8.07□□□□□ -1.12
RRF1YHR038W YLR346CQ06139 101 aa8.06□□□□□ -1.12
RRF1YHR038W YGR035CP53222 116 aa8.05□□□□□ -1.12
RRF1YHR038W SLY41P22215 453 aa8.04□□□□□ -1.12
RRF1YHR038W KIP2P28743 706 aa8.04□□□□□ -1.12
RRF1YHR038W IES2P40154 320 aa8.04□□□□□ -1.12
RRF1YHR038W YIR007WP40566 764 aa8.04□□□□□ -1.12
RRF1YHR038W GLY1P37303 387 aaKnown RBP8.01□□□□□ -1.13
RRF1YHR038W HPF1Q05164 967 aa8.01□□□□□ -1.13
RRF1YHR038W TYW1Q08960 810 aaKnown RBP8.01□□□□□ -1.13
RRF1YHR038W IXR1P33417 597 aa7.99□□□□□ -1.13
RRF1YHR038W NUP85P46673 744 aa7.99□□□□□ -1.13
RRF1YHR038W SCW11P53189 542 aa7.99□□□□□ -1.13
RRF1YHR038W YDL206WQ12424 762 aa7.99□□□□□ -1.13
RRF1YHR038W MRT4P33201 236 aaKnown RBP7.98□□□□□ -1.13
RRF1YHR038W NUP42P49686 430 aaKnown RBP7.98□□□□□ -1.13
RRF1YHR038W FPK1P53739 893 aa7.98□□□□□ -1.13
RRF1YHR038W ALR1Q08269 859 aa7.98□□□□□ -1.13
RRF1YHR038W TY1A-BLQ12266 440 aa7.98□□□□□ -1.13
RRF1YHR038W RPA14P50106 137 aa7.97□□□□□ -1.13
RRF1YHR038W MIP1P15801 1254 aa7.96□□□□□ -1.14
RRF1YHR038W YPR097WQ06839 1073 aa7.96□□□□□ -1.14
RRF1YHR038W DSF2P38213 736 aa7.95□□□□□ -1.14
RRF1YHR038W TBF1Q02457 562 aa7.95□□□□□ -1.14
RRF1YHR038W PUS6P53294 404 aa7.94□□□□□ -1.14
RRF1YHR038W YMR196WQ04336 1088 aa7.93□□□□□ -1.14
RRF1YHR038W SCJ1P25303 377 aa7.92□□□□□ -1.14
RRF1YHR038W DIT2P21595 489 aa7.9□□□□□ -1.14
RRF1YHR038W TRM1P15565 570 aaKnown RBP7.89□□□□□ -1.15
RRF1YHR038W AAD14P42884 376 aa7.86□□□□□ -1.15
RRF1YHR038W LSC2P53312 427 aa7.86□□□□□ -1.15
RRF1YHR038W RTT106P40161 455 aa7.85□□□□□ -1.15
RRF1YHR038W ARG82P07250 355 aa7.84□□□□□ -1.15
RRF1YHR038W DLD1P32891 587 aa7.84□□□□□ -1.15
RRF1YHR038W UBP2Q01476 1272 aa7.84□□□□□ -1.15
RRF1YHR038W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms