RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W TY1A-ORP0CX59 440 aa6.97□□□□□ -1.29
SEC4YFL005W TY1A-PR2P0CX60 440 aa6.97□□□□□ -1.29
SEC4YFL005W TY1A-DR5P0CX65 440 aa6.97□□□□□ -1.29
SEC4YFL005W TY1A-ER2P0CX66 440 aa6.97□□□□□ -1.29
SEC4YFL005W TY1A-GR3P0CX67 440 aa6.97□□□□□ -1.29
SEC4YFL005W TY1A-LR1P0CX68 440 aa6.97□□□□□ -1.29
SEC4YFL005W TY1A-MR2P0CX69 440 aa6.97□□□□□ -1.29
SEC4YFL005W TY1A-JR2P47099 440 aa6.97□□□□□ -1.29
SEC4YFL005W TY1A-DR1Q03856 440 aa6.97□□□□□ -1.29
SEC4YFL005W TY1A-ML1Q04706 440 aaKnown RBP6.97□□□□□ -1.29
SEC4YFL005W TY1A-BRQ12217 440 aa6.97□□□□□ -1.29
SEC4YFL005W TY1A-NL2Q12470 440 aa6.97□□□□□ -1.29
SEC4YFL005W TY1A-GR2Q12485 440 aa6.97□□□□□ -1.29
SEC4YFL005W YPR148CQ06523 435 aa6.96□□□□□ -1.3
SEC4YFL005W PAT1P25644 796 aaKnown RBP6.95□□□□□ -1.3
SEC4YFL005W MVP1P40959 511 aaKnown RBP6.95□□□□□ -1.3
SEC4YFL005W FRK1Q03002 865 aaPredicted RBP6.94□□□□□ -1.3
SEC4YFL005W MAK21Q12176 1025 aaKnown RBP6.94□□□□□ -1.3
SEC4YFL005W COX6P00427 148 aa6.93□□□□□ -1.3
SEC4YFL005W BDP1P46678 594 aa6.92□□□□□ -1.3
SEC4YFL005W RRN7P40992 514 aa6.91□□□□□ -1.3
SEC4YFL005W HED1Q03937 162 aa6.91□□□□□ -1.3
SEC4YFL005W YPR109WQ06104 294 aa6.91□□□□□ -1.3
SEC4YFL005W MET22P32179 357 aa6.9□□□□□ -1.3
SEC4YFL005W RGR1P19263 1082 aa6.89□□□□□ -1.31
SEC4YFL005W ENV9Q08651 330 aa6.88□□□□□ -1.31
SEC4YFL005W SAS10Q12136 610 aaPredicted RBP6.87□□□□□ -1.31
SEC4YFL005W VPS70P47161 811 aa6.84□□□□□ -1.31
SEC4YFL005W YDR444WQ04093 687 aa6.81□□□□□ -1.32
SEC4YFL005W KEX2P13134 814 aa6.8□□□□□ -1.32
SEC4YFL005W ASH1P34233 588 aa6.8□□□□□ -1.32
SEC4YFL005W ERF2Q06551 359 aa6.79□□□□□ -1.32
SEC4YFL005W MOD5P07884 428 aa6.78□□□□□ -1.32
SEC4YFL005W AFT1P22149 690 aa6.77□□□□□ -1.33
SEC4YFL005W HST3P53687 447 aa6.76□□□□□ -1.33
SEC4YFL005W LCB5Q06147 687 aaKnown RBP6.76□□□□□ -1.33
SEC4YFL005W MET32Q12041 191 aa6.76□□□□□ -1.33
SEC4YFL005W PAC1P39946 494 aaKnown RBP6.75□□□□□ -1.33
SEC4YFL005W PSE1P32337 1089 aaKnown RBP6.72□□□□□ -1.33
SEC4YFL005W CLB5P30283 435 aa6.71□□□□□ -1.34
SEC4YFL005W YDL176WQ12027 708 aa6.71□□□□□ -1.34
SEC4YFL005W RTF1P53064 558 aa6.7□□□□□ -1.34
SEC4YFL005W TUB4P53378 473 aa6.7□□□□□ -1.34
SEC4YFL005W AGE1Q04412 482 aa6.7□□□□□ -1.34
SEC4YFL005W PUS5Q06244 254 aa6.7□□□□□ -1.34
SEC4YFL005W RRD1P40454 393 aaKnown RBP6.69□□□□□ -1.34
SEC4YFL005W CKB1P43639 278 aa6.67□□□□□ -1.34
SEC4YFL005W YJR115WP47152 169 aa6.67□□□□□ -1.34
SEC4YFL005W YNL115CP53925 644 aa6.67□□□□□ -1.34
SEC4YFL005W PBS2P08018 668 aa6.66□□□□□ -1.34
SEC4YFL005W TPD3P31383 635 aa6.63□□□□□ -1.35
SEC4YFL005W KXD1P53158 218 aa6.63□□□□□ -1.35
SEC4YFL005W SIT4P20604 311 aa6.62□□□□□ -1.35
SEC4YFL005W LEO1P38439 464 aa6.62□□□□□ -1.35
SEC4YFL005W MSB3P48566 633 aaPredicted RBP6.62□□□□□ -1.35
SEC4YFL005W LEU3P08638 886 aa6.6□□□□□ -1.35
SEC4YFL005W SPB4P25808 606 aaPredicted RBP6.6□□□□□ -1.35
SEC4YFL005W SYH1Q02875 849 aaKnown RBP6.6□□□□□ -1.35
SEC4YFL005W HXT10P43581 546 aa6.59□□□□□ -1.35
SEC4YFL005W ACO2P39533 789 aa6.58□□□□□ -1.36
SEC4YFL005W DSF2P38213 736 aa6.57□□□□□ -1.36
SEC4YFL005W YLR346CQ06139 101 aa6.57□□□□□ -1.36
SEC4YFL005W MAM3Q12296 706 aa6.57□□□□□ -1.36
SEC4YFL005W UGA3P26370 528 aa6.56□□□□□ -1.36
SEC4YFL005W TEA1P47988 759 aa6.56□□□□□ -1.36
SEC4YFL005W MTC5Q03897 1148 aa6.55□□□□□ -1.36
SEC4YFL005W CAF120P53836 1060 aa6.54□□□□□ -1.36
SEC4YFL005W PDC1P06169 563 aaKnown RBP6.53□□□□□ -1.36
SEC4YFL005W OPT2Q06593 877 aa6.53□□□□□ -1.36
SEC4YFL005W SRF1Q12516 437 aa6.53□□□□□ -1.36
SEC4YFL005W PTK2P47116 818 aaKnown RBP6.52□□□□□ -1.37
SEC4YFL005W NIS1P53939 407 aa6.52□□□□□ -1.37
SEC4YFL005W IES2P40154 320 aa6.51□□□□□ -1.37
SEC4YFL005W TRK2P28584 889 aa6.5□□□□□ -1.37
SEC4YFL005W SLY41P22215 453 aa6.49□□□□□ -1.37
SEC4YFL005W RTT106P40161 455 aa6.49□□□□□ -1.37
SEC4YFL005W NUP85P46673 744 aa6.49□□□□□ -1.37
SEC4YFL005W NUP42P49686 430 aaKnown RBP6.49□□□□□ -1.37
SEC4YFL005W DIT2P21595 489 aa6.48□□□□□ -1.37
SEC4YFL005W KIP2P28743 706 aa6.48□□□□□ -1.37
SEC4YFL005W ALR1Q08269 859 aa6.48□□□□□ -1.37
SEC4YFL005W MRT4P33201 236 aaKnown RBP6.47□□□□□ -1.37
SEC4YFL005W GLY1P37303 387 aaKnown RBP6.47□□□□□ -1.37
SEC4YFL005W RPA14P50106 137 aa6.47□□□□□ -1.37
SEC4YFL005W PUS6P53294 404 aa6.47□□□□□ -1.37
SEC4YFL005W YPR097WQ06839 1073 aa6.47□□□□□ -1.37
SEC4YFL005W IXR1P33417 597 aa6.46□□□□□ -1.38
SEC4YFL005W YGR035CP53222 116 aa6.46□□□□□ -1.38
SEC4YFL005W FPK1P53739 893 aa6.45□□□□□ -1.38
SEC4YFL005W YMR196WQ04336 1088 aa6.44□□□□□ -1.38
SEC4YFL005W TYW1Q08960 810 aaKnown RBP6.44□□□□□ -1.38
SEC4YFL005W MIP1P15801 1254 aa6.43□□□□□ -1.38
SEC4YFL005W RPN1P38764 993 aaKnown RBP6.43□□□□□ -1.38
SEC4YFL005W SCW11P53189 542 aa6.43□□□□□ -1.38
SEC4YFL005W TBF1Q02457 562 aa6.43□□□□□ -1.38
SEC4YFL005W YIR007WP40566 764 aa6.42□□□□□ -1.38
SEC4YFL005W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
SEC4YFL005W YDL206WQ12424 762 aa6.42□□□□□ -1.38
SEC4YFL005W HPF1Q05164 967 aa6.41□□□□□ -1.38
SEC4YFL005W TY1A-BLQ12266 440 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms