RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W NPL4P33755 580 aa9.41□□□□□ -0.9
SHE9YDR393W YPR109WQ06104 294 aa9.39□□□□□ -0.91
SHE9YDR393W SEC2P17065 759 aa9.38□□□□□ -0.91
SHE9YDR393W CKB1P43639 278 aa9.38□□□□□ -0.91
SHE9YDR393W PBS2P08018 668 aa9.37□□□□□ -0.91
SHE9YDR393W GCD11P32481 527 aaKnown RBP9.37□□□□□ -0.91
SHE9YDR393W ERG12P07277 443 aa9.36□□□□□ -0.91
SHE9YDR393W CST6P40535 587 aa9.34□□□□□ -0.91
SHE9YDR393W SPT16P32558 1035 aaKnown RBP9.31□□□□□ -0.92
SHE9YDR393W PSE1P32337 1089 aaKnown RBP9.29□□□□□ -0.92
SHE9YDR393W LAM6Q08001 693 aa9.29□□□□□ -0.92
SHE9YDR393W SAS10Q12136 610 aaPredicted RBP9.28□□□□□ -0.92
SHE9YDR393W RRN7P40992 514 aa9.27□□□□□ -0.93
SHE9YDR393W KEX2P13134 814 aa9.26□□□□□ -0.93
SHE9YDR393W DMA1P38823 416 aa9.26□□□□□ -0.93
SHE9YDR393W CLA4P48562 842 aa9.26□□□□□ -0.93
SHE9YDR393W AIR1P40507 360 aaKnown RBP9.25□□□□□ -0.93
SHE9YDR393W ERF2Q06551 359 aa9.25□□□□□ -0.93
SHE9YDR393W MAM3Q12296 706 aa9.25□□□□□ -0.93
SHE9YDR393W DSF2P38213 736 aa9.23□□□□□ -0.93
SHE9YDR393W FRK1Q03002 865 aaPredicted RBP9.22□□□□□ -0.93
SHE9YDR393W PAT1P25644 796 aaKnown RBP9.21□□□□□ -0.94
SHE9YDR393W RGA1P39083 1007 aa9.21□□□□□ -0.94
SHE9YDR393W IES2P40154 320 aa9.21□□□□□ -0.94
SHE9YDR393W BDP1P46678 594 aa9.21□□□□□ -0.94
SHE9YDR393W CLB5P30283 435 aa9.2□□□□□ -0.94
SHE9YDR393W PAC1P39946 494 aaKnown RBP9.15□□□□□ -0.94
SHE9YDR393W BRE2P43132 505 aa9.15□□□□□ -0.94
SHE9YDR393W NUP42P49686 430 aaKnown RBP9.15□□□□□ -0.94
SHE9YDR393W AGE1Q04412 482 aa9.14□□□□□ -0.95
SHE9YDR393W CDC4P07834 779 aa9.12□□□□□ -0.95
SHE9YDR393W RTF1P53064 558 aa9.12□□□□□ -0.95
SHE9YDR393W RGA2Q06407 1009 aa9.12□□□□□ -0.95
SHE9YDR393W MOD5P07884 428 aa9.11□□□□□ -0.95
SHE9YDR393W TUB4P53378 473 aa9.11□□□□□ -0.95
SHE9YDR393W HED1Q03937 162 aa9.1□□□□□ -0.95
SHE9YDR393W SIT4P20604 311 aa9.08□□□□□ -0.96
SHE9YDR393W TEA1P47988 759 aa9.08□□□□□ -0.96
SHE9YDR393W YNL115CP53925 644 aa9.08□□□□□ -0.96
SHE9YDR393W GCR2Q01722 534 aa9.07□□□□□ -0.96
SHE9YDR393W DIT2P21595 489 aa9.06□□□□□ -0.96
SHE9YDR393W SPB4P25808 606 aaPredicted RBP9.06□□□□□ -0.96
SHE9YDR393W NIS1P53939 407 aa9.05□□□□□ -0.96
SHE9YDR393W PUS5Q06244 254 aa9.01□□□□□ -0.97
SHE9YDR393W MET32Q12041 191 aa8.99□□□□□ -0.97
SHE9YDR393W YPL062WQ02781 134 aa8.99□□□□□ -0.97
SHE9YDR393W FPK1P53739 893 aa8.96□□□□□ -0.98
SHE9YDR393W GAR1P28007 205 aaKnown RBP8.95□□□□□ -0.98
SHE9YDR393W ASH1P34233 588 aa8.94□□□□□ -0.98
SHE9YDR393W SLY41P22215 453 aa8.93□□□□□ -0.98
SHE9YDR393W TPD3P31383 635 aa8.93□□□□□ -0.98
SHE9YDR393W KXD1P53158 218 aa8.93□□□□□ -0.98
SHE9YDR393W AFT1P22149 690 aa8.92□□□□□ -0.98
SHE9YDR393W MET22P32179 357 aa8.92□□□□□ -0.98
SHE9YDR393W RRD1P40454 393 aaKnown RBP8.92□□□□□ -0.98
SHE9YDR393W YMR196WQ04336 1088 aa8.92□□□□□ -0.98
SHE9YDR393W PDC1P06169 563 aaKnown RBP8.91□□□□□ -0.98
SHE9YDR393W HXT10P43581 546 aa8.91□□□□□ -0.98
SHE9YDR393W ENV9Q08651 330 aa8.9□□□□□ -0.98
SHE9YDR393W HST3P53687 447 aa8.88□□□□□ -0.99
SHE9YDR393W GBP2P25555 427 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
SHE9YDR393W SCJ1P25303 377 aa8.86□□□□□ -0.99
SHE9YDR393W HST2P53686 357 aa8.86□□□□□ -0.99
SHE9YDR393W PUS6P53294 404 aa8.84□□□□□ -0.99
SHE9YDR393W SYH1Q02875 849 aaKnown RBP8.84□□□□□ -0.99
SHE9YDR393W YDR444WQ04093 687 aa8.84□□□□□ -0.99
SHE9YDR393W YDL206WQ12424 762 aa8.84□□□□□ -0.99
SHE9YDR393W RPA14P50106 137 aa8.83□□□□□ -1
SHE9YDR393W TRM1P15565 570 aaKnown RBP8.82□□□□□ -1
SHE9YDR393W TBF1Q02457 562 aa8.82□□□□□ -1
SHE9YDR393W ALR1Q08269 859 aa8.82□□□□□ -1
SHE9YDR393W YJR115WP47152 169 aa8.81□□□□□ -1
SHE9YDR393W YPR097WQ06839 1073 aa8.81□□□□□ -1
SHE9YDR393W ATF2P53296 535 aa8.8□□□□□ -1
SHE9YDR393W LCB5Q06147 687 aaKnown RBP8.8□□□□□ -1
SHE9YDR393W MMP1Q12372 583 aa8.79□□□□□ -1
SHE9YDR393W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
SHE9YDR393W MSB3P48566 633 aaPredicted RBP8.78□□□□□ -1
SHE9YDR393W YNR021WP53723 404 aaKnown RBP8.78□□□□□ -1
SHE9YDR393W GLC3P32775 704 aa8.77□□□□□ -1.01
SHE9YDR393W GLN1P32288 370 aaKnown RBP8.75□□□□□ -1.01
SHE9YDR393W ESS1P22696 170 aa8.74□□□□□ -1.01
SHE9YDR393W KIP2P28743 706 aa8.73□□□□□ -1.01
SHE9YDR393W YDL176WQ12027 708 aa8.73□□□□□ -1.01
SHE9YDR393W IXR1P33417 597 aa8.72□□□□□ -1.01
SHE9YDR393W YJU3P28321 313 aa8.71□□□□□ -1.02
SHE9YDR393W UGA3P26370 528 aa8.7□□□□□ -1.02
SHE9YDR393W MRT4P33201 236 aaKnown RBP8.7□□□□□ -1.02
SHE9YDR393W TYW1Q08960 810 aaKnown RBP8.7□□□□□ -1.02
SHE9YDR393W PTK2P47116 818 aaKnown RBP8.68□□□□□ -1.02
SHE9YDR393W KTR1P27810 393 aaKnown RBP8.66□□□□□ -1.02
SHE9YDR393W RSC30P38781 883 aa8.66□□□□□ -1.02
SHE9YDR393W VAC17P25591 423 aa8.64□□□□□ -1.03
SHE9YDR393W AIM7Q12156 149 aa8.64□□□□□ -1.03
SHE9YDR393W SRF1Q12516 437 aa8.62□□□□□ -1.03
SHE9YDR393W PKH3Q03306 898 aaPredicted RBP8.61□□□□□ -1.03
SHE9YDR393W OPT2Q06593 877 aa8.61□□□□□ -1.03
SHE9YDR393W RTT106P40161 455 aa8.6□□□□□ -1.03
SHE9YDR393W ACO2P39533 789 aa8.57□□□□□ -1.04
SHE9YDR393W NUP85P46673 744 aa8.57□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms