RNA–Protein interactions for RNA: YBR017C

KAP104, Transcript of Transportin or cytosolic karyopherin beta 2, yeastyeast

Gene KAP104, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KAP104YBR017C BRL1P38770 471 aa3.68□□□□□ -1.82
KAP104YBR017C SAS4Q04003 481 aa3.68□□□□□ -1.82
KAP104YBR017C HIF1Q12373 385 aa3.68□□□□□ -1.82
KAP104YBR017C SPT2P06843 333 aaPredicted RBP3.67□□□□□ -1.82
KAP104YBR017C NMD2P38798 1089 aaKnown RBP3.67□□□□□ -1.82
KAP104YBR017C FUN12P39730 1002 aaKnown RBP3.67□□□□□ -1.82
KAP104YBR017C CWC22P53333 577 aaKnown RBP3.67□□□□□ -1.82
KAP104YBR017C CLC1P17891 233 aa3.67□□□□□ -1.82
KAP104YBR017C SPC110P32380 944 aa3.67□□□□□ -1.82
KAP104YBR017C IFH1P39520 1085 aa3.67□□□□□ -1.82
KAP104YBR017C CHZ1P40019 153 aaPredicted RBP3.67□□□□□ -1.82
KAP104YBR017C VPS4P52917 437 aa3.67□□□□□ -1.82
KAP104YBR017C SPT16P32558 1035 aaKnown RBP3.66□□□□□ -1.82
KAP104YBR017C ECM5Q03214 1411 aa3.66□□□□□ -1.82
KAP104YBR017C RPP1BP10622 106 aaKnown RBP3.66□□□□□ -1.82
KAP104YBR017C MDG1P53885 366 aa3.66□□□□□ -1.82
KAP104YBR017C SPP41P38904 1435 aa3.65□□□□□ -1.82
KAP104YBR017C MRF1P30775 413 aaPredicted RBP3.65□□□□□ -1.83
KAP104YBR017C SSN2P38931 1420 aa3.65□□□□□ -1.83
KAP104YBR017C ENV11P53246 860 aa3.64□□□□□ -1.83
KAP104YBR017C HSC82P15108 705 aaKnown RBP3.64□□□□□ -1.83
KAP104YBR017C GCR2Q01722 534 aa3.64□□□□□ -1.83
KAP104YBR017C YPL062WQ02781 134 aa3.64□□□□□ -1.83
KAP104YBR017C TLG1Q03322 224 aa3.64□□□□□ -1.83
KAP104YBR017C FPR4Q06205 392 aaPredicted RBP3.64□□□□□ -1.83
KAP104YBR017C YPR015CQ12531 247 aa3.63□□□□□ -1.83
KAP104YBR017C PEP1P32319 1579 aa3.63□□□□□ -1.83
KAP104YBR017C UFD4P33202 1483 aa3.63□□□□□ -1.83
KAP104YBR017C CDC11P32458 415 aa3.63□□□□□ -1.83
KAP104YBR017C TAN1P53072 289 aaPredicted RBP3.63□□□□□ -1.83
KAP104YBR017C ASF1P32447 279 aa3.62□□□□□ -1.83
KAP104YBR017C BYE1P36106 594 aa3.62□□□□□ -1.83
KAP104YBR017C YNL011CP53980 444 aa3.62□□□□□ -1.83
KAP104YBR017C RNA1P11745 407 aaKnown RBP3.62□□□□□ -1.83
KAP104YBR017C MPP10P47083 593 aaKnown RBP3.62□□□□□ -1.83
KAP104YBR017C GAR1P28007 205 aaKnown RBP3.61□□□□□ -1.83
KAP104YBR017C RAM1P22007 431 aa3.61□□□□□ -1.83
KAP104YBR017C KEX1P09620 729 aa3.6□□□□□ -1.83
KAP104YBR017C CDC73Q06697 393 aa3.6□□□□□ -1.83
KAP104YBR017C GIN4Q12263 1142 aa3.6□□□□□ -1.83
KAP104YBR017C IRC20Q06554 1556 aa3.6□□□□□ -1.83
KAP104YBR017C TOA1P32773 286 aa3.59□□□□□ -1.83
KAP104YBR017C BRE2P43132 505 aa3.59□□□□□ -1.83
KAP104YBR017C HUL5P53119 910 aa3.59□□□□□ -1.83
KAP104YBR017C ERG12P07277 443 aa3.59□□□□□ -1.83
KAP104YBR017C IME2P32581 645 aa3.59□□□□□ -1.83
KAP104YBR017C NHA1Q99271 985 aa3.59□□□□□ -1.83
KAP104YBR017C SRP54P20424 541 aaKnown RBP3.58□□□□□ -1.84
KAP104YBR017C RKM3P38222 552 aa3.58□□□□□ -1.84
KAP104YBR017C YSH1Q06224 779 aaPredicted RBP3.58□□□□□ -1.84
KAP104YBR017C PSH1Q12161 406 aa3.58□□□□□ -1.84
KAP104YBR017C PDR1P12383 1068 aa3.58□□□□□ -1.84
KAP104YBR017C CBF5P33322 483 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
KAP104YBR017C MSH4P40965 878 aaPredicted RBP3.58□□□□□ -1.84
KAP104YBR017C SEC27P41811 889 aaKnown RBP3.58□□□□□ -1.84
KAP104YBR017C TOP2P06786 1428 aaKnown RBP3.58□□□□□ -1.84
KAP104YBR017C YMR124WP39523 943 aaKnown RBP3.57□□□□□ -1.84
KAP104YBR017C PEX21P50091 288 aa3.57□□□□□ -1.84
KAP104YBR017C APL5Q08951 932 aaKnown RBP3.57□□□□□ -1.84
KAP104YBR017C YVC1Q12324 675 aa3.57□□□□□ -1.84
KAP104YBR017C SMC3P47037 1230 aa3.57□□□□□ -1.84
KAP104YBR017C RRP15Q06511 250 aaPredicted RBP3.57□□□□□ -1.84
KAP104YBR017C MMS22Q06164 1454 aa3.56□□□□□ -1.84
KAP104YBR017C PEA2P40091 420 aa3.56□□□□□ -1.84
KAP104YBR017C ORC1P54784 914 aaPredicted RBP3.56□□□□□ -1.84
KAP104YBR017C RAD54P32863 898 aa3.56□□□□□ -1.84
KAP104YBR017C BRN1P38170 754 aa3.56□□□□□ -1.84
KAP104YBR017C HOS4P40480 1083 aa3.56□□□□□ -1.84
KAP104YBR017C YMR196WQ04336 1088 aa3.56□□□□□ -1.84
KAP104YBR017C MYO4P32492 1471 aa3.55□□□□□ -1.84
KAP104YBR017C PAF1P38351 445 aa3.55□□□□□ -1.84
KAP104YBR017C NNF2P53253 936 aa3.55□□□□□ -1.84
KAP104YBR017C RTS3P53289 263 aa3.55□□□□□ -1.84
KAP104YBR017C EAF7P53911 425 aaKnown RBP3.55□□□□□ -1.84
KAP104YBR017C PRT1P06103 763 aaKnown RBP3.55□□□□□ -1.84
KAP104YBR017C YGL081WP53156 320 aa3.55□□□□□ -1.84
KAP104YBR017C NOP8Q08287 484 aaPredicted RBP3.55□□□□□ -1.84
KAP104YBR017C SWI3P32591 825 aa3.54□□□□□ -1.84
KAP104YBR017C LTV1P34078 463 aa3.54□□□□□ -1.84
KAP104YBR017C RLP24Q07915 199 aaKnown RBP3.54□□□□□ -1.84
KAP104YBR017C EDE1P34216 1381 aa3.54□□□□□ -1.84
KAP104YBR017C SDH2P21801 266 aa3.54□□□□□ -1.84
KAP104YBR017C SNF7P39929 240 aaKnown RBP3.54□□□□□ -1.84
KAP104YBR017C NOP7P53261 605 aaKnown RBP3.54□□□□□ -1.84
KAP104YBR017C NPL4P33755 580 aa3.53□□□□□ -1.84
KAP104YBR017C SAP190P36123 1033 aa3.53□□□□□ -1.84
KAP104YBR017C YPK9Q12697 1472 aa3.53□□□□□ -1.84
KAP104YBR017C KIC1P38692 1080 aa3.53□□□□□ -1.84
KAP104YBR017C NPR3P38742 1146 aa3.53□□□□□ -1.84
KAP104YBR017C VHR2P40041 505 aa3.53□□□□□ -1.84
KAP104YBR017C YIR014WP40570 242 aa3.53□□□□□ -1.84
KAP104YBR017C THO2P53552 1597 aaKnown RBP3.53□□□□□ -1.84
KAP104YBR017C EFB1P32471 206 aaKnown RBP3.52□□□□□ -1.85
KAP104YBR017C VID30P53076 958 aa3.52□□□□□ -1.85
KAP104YBR017C NOP58Q12499 511 aaKnown RBP3.52□□□□□ -1.85
KAP104YBR017C NUP170P38181 1502 aa3.52□□□□□ -1.85
KAP104YBR017C CKB1P43639 278 aa3.52□□□□□ -1.85
KAP104YBR017C YRR1Q12172 810 aa3.52□□□□□ -1.85
KAP104YBR017C XRN1P22147 1528 aaKnown RBP3.52□□□□□ -1.85
KAP104YBR017C RPT2P40327 437 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms