Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 YML009W-BYML009W-B 477 nt24.37■■□□□ 1.49
VPS4P52917 NOP1YDL014W 984 nt23.89■■□□□ 1.41
VPS4P52917 NSR1YGR159C 1245 nt23.69■■□□□ 1.38
VPS4P52917 YKL036CYKL036C 393 nt22.64■■□□□ 1.21
VPS4P52917 YJL027CYJL027C 417 nt21.24■□□□□ 0.99
VPS4P52917 Q0297Q0297 156 nt21.17■□□□□ 0.98
VPS4P52917 SCS3YGL126W 1143 nt20.96■□□□□ 0.95
VPS4P52917 SRX1YKL086W 384 nt20.93■□□□□ 0.94
VPS4P52917 MDJ1YFL016C 1536 nt20.52■□□□□ 0.87
VPS4P52917 YCR051WYCR051W 669 nt19.87■□□□□ 0.77
VPS4P52917 YOL085CYOL085C 342 nt19.63■□□□□ 0.73
VPS4P52917 SCJ1YMR214W 1134 nt19.27■□□□□ 0.68
VPS4P52917 PKP1YIL042C 1185 nt19.26■□□□□ 0.67
VPS4P52917 RPP1BYDL130W 321 nt18.99■□□□□ 0.63
VPS4P52917 ATS1YAL020C 1002 nt18.9■□□□□ 0.62
VPS4P52917 TRN1tP(UGG)A 72 nt18.6■□□□□ 0.57
VPS4P52917 SUF9tP(UGG)F 72 nt18.6■□□□□ 0.57
VPS4P52917 SUF8tP(UGG)H 72 nt18.6■□□□□ 0.57
VPS4P52917 tP(UGG)LtP(UGG)L 72 nt18.6■□□□□ 0.57
VPS4P52917 SUF7tP(UGG)M 72 nt18.6■□□□□ 0.57
VPS4P52917 tP(UGG)N1tP(UGG)N1 72 nt18.6■□□□□ 0.57
VPS4P52917 tP(UGG)N2tP(UGG)N2 72 nt18.6■□□□□ 0.57
VPS4P52917 tP(UGG)O1tP(UGG)O1 72 nt18.6■□□□□ 0.57
VPS4P52917 SUF11tP(UGG)O2 72 nt18.6■□□□□ 0.57
VPS4P52917 DBP2YNL112W 1641 nt18.45■□□□□ 0.54
VPS4P52917 CCC1YLR220W 969 nt18.37■□□□□ 0.53
VPS4P52917 PET122YER153C 765 nt18.1■□□□□ 0.49
VPS4P52917 SCR1SCR1 522 nt17.99■□□□□ 0.47
VPS4P52917 tP(UGG)O3tP(UGG)O3 72 nt17.78■□□□□ 0.44
VPS4P52917 RRN5YLR141W 1092 nt17.63■□□□□ 0.41
VPS4P52917 RTC3YHR087W 336 nt17.53■□□□□ 0.4
VPS4P52917 PST2YDR032C 597 nt17.43■□□□□ 0.38
VPS4P52917 RSB1YOR049C 1065 nt17.41■□□□□ 0.38
VPS4P52917 RVS167YDR388W 1449 nt17.35■□□□□ 0.37
VPS4P52917 YER088W-BYER088W-B 147 nt17.3■□□□□ 0.36
VPS4P52917 YBR190WYBR190W 312 nt17.3■□□□□ 0.36
VPS4P52917 YDJ1YNL064C 1230 nt17.18■□□□□ 0.34
VPS4P52917 YKL097CYKL097C 411 nt17■□□□□ 0.31
VPS4P52917 SHR5YOL110W 714 nt16.94■□□□□ 0.3
VPS4P52917 SSA3YBL075C 1950 nt16.81■□□□□ 0.28
VPS4P52917 GAR1YHR089C 618 nt16.7■□□□□ 0.26
VPS4P52917 SHU1YHL006C 453 nt16.58■□□□□ 0.24
VPS4P52917 YOR139CYOR139C 393 nt16.29■□□□□ 0.2
VPS4P52917 DEP1YAL013W 1218 nt16.27■□□□□ 0.2
VPS4P52917 YAL037C-BYAL037C-B 975 nt16.13■□□□□ 0.17
VPS4P52917 TIR1YER011W 765 nt16.12■□□□□ 0.17
VPS4P52917 URN1YPR152C 1398 nt16.1■□□□□ 0.17
VPS4P52917 YNL208WYNL208W 600 nt16.06■□□□□ 0.16
VPS4P52917 NPL3YDR432W 1245 nt15.93■□□□□ 0.14
VPS4P52917 RPN10YHR200W 807 nt15.93■□□□□ 0.14
VPS4P52917 SSA1YAL005C 1929 nt15.85■□□□□ 0.13
VPS4P52917 SRB2YHR041C 633 nt15.76■□□□□ 0.11
VPS4P52917 OPI9YLR338W 858 nt15.75■□□□□ 0.11
VPS4P52917 MNP1YGL068W 585 nt15.64■□□□□ 0.09
VPS4P52917 HOM6YJR139C 1080 nt15.61■□□□□ 0.09
VPS4P52917 tM(CAU)CtM(CAU)C 72 nt15.59■□□□□ 0.09
VPS4P52917 IMT4tM(CAU)E 72 nt15.59■□□□□ 0.09
VPS4P52917 IMT3tM(CAU)J3 72 nt15.59■□□□□ 0.09
VPS4P52917 IMT1tM(CAU)O1 72 nt15.59■□□□□ 0.09
VPS4P52917 IMT2tM(CAU)P 72 nt15.59■□□□□ 0.09
VPS4P52917 YGR021WYGR021W 873 nt15.58■□□□□ 0.08
VPS4P52917 YOL037CYOL037C 354 nt15.56■□□□□ 0.08
VPS4P52917 WWM1YFL010C 636 nt15.53■□□□□ 0.08
VPS4P52917 SAH1YER043C 1350 nt15.5■□□□□ 0.07
VPS4P52917 YJR018WYJR018W 363 nt15.38■□□□□ 0.05
VPS4P52917 YJR120WYJR120W 351 nt15.38■□□□□ 0.05
VPS4P52917 RKM5YLR137W 1104 nt15.37■□□□□ 0.05
VPS4P52917 PUT4YOR348C 1884 nt15.33■□□□□ 0.05
VPS4P52917 PUN1YLR414C 792 nt15.27■□□□□ 0.04
VPS4P52917 YFL021C-AYFL021C-A 855 nt15.25■□□□□ 0.03
VPS4P52917 ARE1YCR048W 1833 nt15.23■□□□□ 0.03
VPS4P52917 MOT3YMR070W 1473 nt15.22■□□□□ 0.03
VPS4P52917 PUS2YGL063W 1113 nt15.21■□□□□ 0.03
VPS4P52917 RPP2BYDR382W 333 nt15.19■□□□□ 0.02
VPS4P52917 YLR281CYLR281C 468 nt15.19■□□□□ 0.02
VPS4P52917 BDH2YAL061W 1254 nt15.04■□□□□ -0
VPS4P52917 WHI5YOR083W 888 nt15.04■□□□□ -0
VPS4P52917 PTC2YER089C 1395 nt15□□□□□ -0.01
VPS4P52917 BSC6YOL137W 1494 nt14.99□□□□□ -0.01
VPS4P52917 YHR049C-AYHR049C-A 297 nt14.98□□□□□ -0.01
VPS4P52917 LSM3YLR438C-A 270 nt14.95□□□□□ -0.02
VPS4P52917 POA1YBR022W 534 nt14.91□□□□□ -0.02
VPS4P52917 YPR011CYPR011C 981 nt14.88□□□□□ -0.03
VPS4P52917 FMP45YDL222C 930 nt14.84□□□□□ -0.03
VPS4P52917 MRPL8YJL063C 717 nt14.82□□□□□ -0.04
VPS4P52917 YLR236CYLR236C 324 nt14.8□□□□□ -0.04
VPS4P52917 DSK2YMR276W 1122 nt14.78□□□□□ -0.04
VPS4P52917 INM2YDR287W 879 nt14.73□□□□□ -0.05
VPS4P52917 YCH1YGR203W 447 nt14.72□□□□□ -0.05
VPS4P52917 YBL100CYBL100C 315 nt14.72□□□□□ -0.05
VPS4P52917 NAB2YGL122C 1578 nt14.7□□□□□ -0.06
VPS4P52917 BUD23YCR047C 828 nt14.65□□□□□ -0.06
VPS4P52917 IMP2'YIL154C 1041 nt14.65□□□□□ -0.06
VPS4P52917 DAL1YIR027C 1383 nt14.64□□□□□ -0.07
VPS4P52917 FIS1YIL065C 468 nt14.63□□□□□ -0.07
VPS4P52917 TRM9YML014W 840 nt14.62□□□□□ -0.07
VPS4P52917 YLR154C-GYLR154C-G 150 nt14.59□□□□□ -0.07
VPS4P52917 FPR4YLR449W 1179 nt14.59□□□□□ -0.07
VPS4P52917 FUN26YAL022C 1554 nt14.58□□□□□ -0.08
VPS4P52917 UBX6YJL048C 1191 nt14.57□□□□□ -0.08
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms