Protein–RNA interactions for Protein: P53980

YNL011C, Uncharacterized protein YNL011C, yeastyeast

Predictions only

Length 444 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL011CP53980 YML009W-BYML009W-B 477 nt21.63■■□□□ 1.05
YNL011CP53980 NSR1YGR159C 1245 nt21.29■■□□□ 1
YNL011CP53980 NOP1YDL014W 984 nt21.02■□□□□ 0.96
YNL011CP53980 YKL036CYKL036C 393 nt19.59■□□□□ 0.73
YNL011CP53980 MDJ1YFL016C 1536 nt18.82■□□□□ 0.6
YNL011CP53980 Q0297Q0297 156 nt18.49■□□□□ 0.55
YNL011CP53980 SRX1YKL086W 384 nt18.4■□□□□ 0.54
YNL011CP53980 YJL027CYJL027C 417 nt18.34■□□□□ 0.53
YNL011CP53980 SCS3YGL126W 1143 nt17.96■□□□□ 0.47
YNL011CP53980 YCR051WYCR051W 669 nt17.5■□□□□ 0.39
YNL011CP53980 YOL085CYOL085C 342 nt17■□□□□ 0.31
YNL011CP53980 SSA3YBL075C 1950 nt16.8■□□□□ 0.28
YNL011CP53980 PKP1YIL042C 1185 nt16.76■□□□□ 0.27
YNL011CP53980 DBP2YNL112W 1641 nt16.73■□□□□ 0.27
YNL011CP53980 RPP1BYDL130W 321 nt16.6■□□□□ 0.25
YNL011CP53980 TRN1tP(UGG)A 72 nt16.56■□□□□ 0.24
YNL011CP53980 SUF9tP(UGG)F 72 nt16.56■□□□□ 0.24
YNL011CP53980 SUF8tP(UGG)H 72 nt16.56■□□□□ 0.24
YNL011CP53980 tP(UGG)LtP(UGG)L 72 nt16.56■□□□□ 0.24
YNL011CP53980 SUF7tP(UGG)M 72 nt16.56■□□□□ 0.24
YNL011CP53980 tP(UGG)N1tP(UGG)N1 72 nt16.56■□□□□ 0.24
YNL011CP53980 tP(UGG)N2tP(UGG)N2 72 nt16.56■□□□□ 0.24
YNL011CP53980 tP(UGG)O1tP(UGG)O1 72 nt16.56■□□□□ 0.24
YNL011CP53980 SUF11tP(UGG)O2 72 nt16.56■□□□□ 0.24
YNL011CP53980 CCC1YLR220W 969 nt16.42■□□□□ 0.22
YNL011CP53980 ATS1YAL020C 1002 nt16.1■□□□□ 0.17
YNL011CP53980 SCJ1YMR214W 1134 nt16.04■□□□□ 0.16
YNL011CP53980 YBR190WYBR190W 312 nt15.94■□□□□ 0.14
YNL011CP53980 PET122YER153C 765 nt15.87■□□□□ 0.13
YNL011CP53980 tP(UGG)O3tP(UGG)O3 72 nt15.73■□□□□ 0.11
YNL011CP53980 SCR1SCR1 522 nt15.69■□□□□ 0.1
YNL011CP53980 RVS167YDR388W 1449 nt15.68■□□□□ 0.1
YNL011CP53980 RTC3YHR087W 336 nt15.62■□□□□ 0.09
YNL011CP53980 RRN5YLR141W 1092 nt15.43■□□□□ 0.06
YNL011CP53980 SHR5YOL110W 714 nt15.2■□□□□ 0.02
YNL011CP53980 YDJ1YNL064C 1230 nt15.17■□□□□ 0.02
YNL011CP53980 RSB1YOR049C 1065 nt15.16■□□□□ 0.02
YNL011CP53980 YER088W-BYER088W-B 147 nt15.13■□□□□ 0.01
YNL011CP53980 PST2YDR032C 597 nt14.89□□□□□ -0.03
YNL011CP53980 GAR1YHR089C 618 nt14.87□□□□□ -0.03
YNL011CP53980 DEP1YAL013W 1218 nt14.78□□□□□ -0.04
YNL011CP53980 Q0182Q0182 405 nt14.76□□□□□ -0.05
YNL011CP53980 URN1YPR152C 1398 nt14.69□□□□□ -0.06
YNL011CP53980 YNL208WYNL208W 600 nt14.5□□□□□ -0.09
YNL011CP53980 MOT3YMR070W 1473 nt14.45□□□□□ -0.1
YNL011CP53980 RPN10YHR200W 807 nt14.45□□□□□ -0.1
YNL011CP53980 OPI9YLR338W 858 nt14.43□□□□□ -0.1
YNL011CP53980 PUT4YOR348C 1884 nt14.38□□□□□ -0.11
YNL011CP53980 YKL097CYKL097C 411 nt14.37□□□□□ -0.11
YNL011CP53980 TIR1YER011W 765 nt14.34□□□□□ -0.11
YNL011CP53980 SAH1YER043C 1350 nt14.33□□□□□ -0.12
YNL011CP53980 PAC11YDR488C 1602 nt14.32□□□□□ -0.12
YNL011CP53980 SHU1YHL006C 453 nt14.26□□□□□ -0.13
YNL011CP53980 NVJ2YPR091C 2313 nt14.25□□□□□ -0.13
YNL011CP53980 ARE1YCR048W 1833 nt14.19□□□□□ -0.14
YNL011CP53980 SSA1YAL005C 1929 nt14.16□□□□□ -0.14
YNL011CP53980 SSA4YER103W 1929 nt14.12□□□□□ -0.15
YNL011CP53980 FPS1YLL043W 2010 nt14.07□□□□□ -0.16
YNL011CP53980 SRB2YHR041C 633 nt14.03□□□□□ -0.16
YNL011CP53980 YAL037C-BYAL037C-B 975 nt14.03□□□□□ -0.16
YNL011CP53980 YJR018WYJR018W 363 nt14.02□□□□□ -0.17
YNL011CP53980 YHR049C-AYHR049C-A 297 nt13.99□□□□□ -0.17
YNL011CP53980 PUN1YLR414C 792 nt13.99□□□□□ -0.17
YNL011CP53980 POA1YBR022W 534 nt13.96□□□□□ -0.17
YNL011CP53980 YJR120WYJR120W 351 nt13.9□□□□□ -0.18
YNL011CP53980 SPT5YML010W 3192 nt13.86□□□□□ -0.19
YNL011CP53980 PTC2YER089C 1395 nt13.83□□□□□ -0.19
YNL011CP53980 YOR139CYOR139C 393 nt13.81□□□□□ -0.2
YNL011CP53980 BDF1YLR399C 2061 nt13.8□□□□□ -0.2
YNL011CP53980 WWM1YFL010C 636 nt13.77□□□□□ -0.21
YNL011CP53980 RPP2BYDR382W 333 nt13.74□□□□□ -0.21
YNL011CP53980 BUD23YCR047C 828 nt13.69□□□□□ -0.22
YNL011CP53980 MNP1YGL068W 585 nt13.68□□□□□ -0.22
YNL011CP53980 HOM6YJR139C 1080 nt13.68□□□□□ -0.22
YNL011CP53980 YGR021WYGR021W 873 nt13.66□□□□□ -0.22
YNL011CP53980 BSC6YOL137W 1494 nt13.61□□□□□ -0.23
YNL011CP53980 NPL3YDR432W 1245 nt13.6□□□□□ -0.23
YNL011CP53980 NAB2YGL122C 1578 nt13.59□□□□□ -0.23
YNL011CP53980 TAT1YBR069C 1860 nt13.57□□□□□ -0.24
YNL011CP53980 BDH2YAL061W 1254 nt13.52□□□□□ -0.25
YNL011CP53980 YFL021C-AYFL021C-A 855 nt13.48□□□□□ -0.25
YNL011CP53980 RKM5YLR137W 1104 nt13.47□□□□□ -0.25
YNL011CP53980 INM2YDR287W 879 nt13.46□□□□□ -0.25
YNL011CP53980 FIS1YIL065C 468 nt13.46□□□□□ -0.25
YNL011CP53980 FPR4YLR449W 1179 nt13.46□□□□□ -0.25
YNL011CP53980 DAL1YIR027C 1383 nt13.45□□□□□ -0.26
YNL011CP53980 YOL037CYOL037C 354 nt13.43□□□□□ -0.26
YNL011CP53980 YBL100CYBL100C 315 nt13.39□□□□□ -0.27
YNL011CP53980 LSM3YLR438C-A 270 nt13.36□□□□□ -0.27
YNL011CP53980 PHO4YFR034C 939 nt13.34□□□□□ -0.27
YNL011CP53980 tM(CAU)CtM(CAU)C 72 nt13.25□□□□□ -0.29
YNL011CP53980 IMT4tM(CAU)E 72 nt13.25□□□□□ -0.29
YNL011CP53980 IMT3tM(CAU)J3 72 nt13.25□□□□□ -0.29
YNL011CP53980 IMT1tM(CAU)O1 72 nt13.25□□□□□ -0.29
YNL011CP53980 IMT2tM(CAU)P 72 nt13.25□□□□□ -0.29
YNL011CP53980 FUN26YAL022C 1554 nt13.24□□□□□ -0.29
YNL011CP53980 TRM9YML014W 840 nt13.24□□□□□ -0.29
YNL011CP53980 UME6YDR207C 2511 nt13.15□□□□□ -0.3
YNL011CP53980 YLR281CYLR281C 468 nt13.15□□□□□ -0.3
YNL011CP53980 CCT6YDR188W 1641 nt13.1□□□□□ -0.31
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms