Protein–RNA interactions for Protein: P22007

RAM1, Protein farnesyltransferase subunit beta, yeastyeast

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAM1P22007 YML009W-BYML009W-B 477 nt21.17■□□□□ 0.98
RAM1P22007 NOP1YDL014W 984 nt20.82■□□□□ 0.92
RAM1P22007 NSR1YGR159C 1245 nt20.67■□□□□ 0.9
RAM1P22007 YKL036CYKL036C 393 nt19.65■□□□□ 0.74
RAM1P22007 YJL027CYJL027C 417 nt18.42■□□□□ 0.54
RAM1P22007 Q0297Q0297 156 nt18.39■□□□□ 0.53
RAM1P22007 SRX1YKL086W 384 nt18.19■□□□□ 0.5
RAM1P22007 SCS3YGL126W 1143 nt18.11■□□□□ 0.49
RAM1P22007 MDJ1YFL016C 1536 nt17.84■□□□□ 0.45
RAM1P22007 YCR051WYCR051W 669 nt17.26■□□□□ 0.35
RAM1P22007 YOL085CYOL085C 342 nt17.01■□□□□ 0.31
RAM1P22007 SCJ1YMR214W 1134 nt16.7■□□□□ 0.26
RAM1P22007 PKP1YIL042C 1185 nt16.65■□□□□ 0.26
RAM1P22007 RPP1BYDL130W 321 nt16.49■□□□□ 0.23
RAM1P22007 ATS1YAL020C 1002 nt16.36■□□□□ 0.21
RAM1P22007 TRN1tP(UGG)A 72 nt16.15■□□□□ 0.18
RAM1P22007 SUF9tP(UGG)F 72 nt16.15■□□□□ 0.18
RAM1P22007 SUF8tP(UGG)H 72 nt16.15■□□□□ 0.18
RAM1P22007 tP(UGG)LtP(UGG)L 72 nt16.15■□□□□ 0.18
RAM1P22007 SUF7tP(UGG)M 72 nt16.15■□□□□ 0.18
RAM1P22007 tP(UGG)N1tP(UGG)N1 72 nt16.15■□□□□ 0.18
RAM1P22007 tP(UGG)N2tP(UGG)N2 72 nt16.15■□□□□ 0.18
RAM1P22007 tP(UGG)O1tP(UGG)O1 72 nt16.15■□□□□ 0.18
RAM1P22007 SUF11tP(UGG)O2 72 nt16.15■□□□□ 0.18
RAM1P22007 DBP2YNL112W 1641 nt16.02■□□□□ 0.16
RAM1P22007 CCC1YLR220W 969 nt15.97■□□□□ 0.15
RAM1P22007 PET122YER153C 765 nt15.67■□□□□ 0.1
RAM1P22007 SCR1SCR1 522 nt15.66■□□□□ 0.1
RAM1P22007 tP(UGG)O3tP(UGG)O3 72 nt15.44■□□□□ 0.06
RAM1P22007 RRN5YLR141W 1092 nt15.29■□□□□ 0.04
RAM1P22007 RVS167YDR388W 1449 nt15.17■□□□□ 0.02
RAM1P22007 RTC3YHR087W 336 nt15.13■□□□□ 0.01
RAM1P22007 YBR190WYBR190W 312 nt15.13■□□□□ 0.01
RAM1P22007 RSB1YOR049C 1065 nt15.1■□□□□ 0.01
RAM1P22007 PST2YDR032C 597 nt15.08■□□□□ 0
RAM1P22007 YGR139WYGR139W 339 nt15.01□□□□□ -0.01
RAM1P22007 YER088W-BYER088W-B 147 nt15□□□□□ -0.01
RAM1P22007 YDJ1YNL064C 1230 nt14.94□□□□□ -0.02
RAM1P22007 SHR5YOL110W 714 nt14.76□□□□□ -0.05
RAM1P22007 YKL097CYKL097C 411 nt14.71□□□□□ -0.05
RAM1P22007 Q0182Q0182 405 nt14.63□□□□□ -0.07
RAM1P22007 MOT3YMR070W 1473 nt14.59□□□□□ -0.07
RAM1P22007 GAR1YHR089C 618 nt14.51□□□□□ -0.09
RAM1P22007 SHU1YHL006C 453 nt14.33□□□□□ -0.12
RAM1P22007 SSA3YBL075C 1950 nt14.17□□□□□ -0.14
RAM1P22007 DEP1YAL013W 1218 nt14.14□□□□□ -0.15
RAM1P22007 YOR139CYOR139C 393 nt14.04□□□□□ -0.16
RAM1P22007 URN1YPR152C 1398 nt14.03□□□□□ -0.16
RAM1P22007 YNL208WYNL208W 600 nt14.02□□□□□ -0.17
RAM1P22007 TIR1YER011W 765 nt14.01□□□□□ -0.17
RAM1P22007 RPN10YHR200W 807 nt13.94□□□□□ -0.18
RAM1P22007 YAL037C-BYAL037C-B 975 nt13.94□□□□□ -0.18
RAM1P22007 NPL3YDR432W 1245 nt13.8□□□□□ -0.2
RAM1P22007 NME1NME1 340 nt13.77□□□□□ -0.21
RAM1P22007 SSA1YAL005C 1929 nt13.75□□□□□ -0.21
RAM1P22007 OPI9YLR338W 858 nt13.74□□□□□ -0.21
RAM1P22007 SRB2YHR041C 633 nt13.59□□□□□ -0.23
RAM1P22007 YGR021WYGR021W 873 nt13.55□□□□□ -0.24
RAM1P22007 HOM6YJR139C 1080 nt13.53□□□□□ -0.24
RAM1P22007 SAH1YER043C 1350 nt13.52□□□□□ -0.25
RAM1P22007 MNP1YGL068W 585 nt13.5□□□□□ -0.25
RAM1P22007 YOL037CYOL037C 354 nt13.5□□□□□ -0.25
RAM1P22007 WWM1YFL010C 636 nt13.47□□□□□ -0.25
RAM1P22007 tM(CAU)CtM(CAU)C 72 nt13.47□□□□□ -0.25
RAM1P22007 IMT4tM(CAU)E 72 nt13.47□□□□□ -0.25
RAM1P22007 IMT3tM(CAU)J3 72 nt13.47□□□□□ -0.25
RAM1P22007 IMT1tM(CAU)O1 72 nt13.47□□□□□ -0.25
RAM1P22007 IMT2tM(CAU)P 72 nt13.47□□□□□ -0.25
RAM1P22007 CSM2YIL132C 642 nt13.45□□□□□ -0.26
RAM1P22007 YJR018WYJR018W 363 nt13.42□□□□□ -0.26
RAM1P22007 PUT4YOR348C 1884 nt13.36□□□□□ -0.27
RAM1P22007 PUN1YLR414C 792 nt13.35□□□□□ -0.27
RAM1P22007 RKM5YLR137W 1104 nt13.33□□□□□ -0.28
RAM1P22007 YJR120WYJR120W 351 nt13.32□□□□□ -0.28
RAM1P22007 VAR1Q0140 1197 nt13.3□□□□□ -0.28
RAM1P22007 RPP2BYDR382W 333 nt13.28□□□□□ -0.28
RAM1P22007 ARE1YCR048W 1833 nt13.27□□□□□ -0.28
RAM1P22007 PAU21YOR394W 495 nt13.27□□□□□ -0.29
RAM1P22007 PAU22YPL282C 495 nt13.27□□□□□ -0.29
RAM1P22007 YFL021C-AYFL021C-A 855 nt13.26□□□□□ -0.29
RAM1P22007 PUS2YGL063W 1113 nt13.18□□□□□ -0.3
RAM1P22007 YLR281CYLR281C 468 nt13.18□□□□□ -0.3
RAM1P22007 ARO7YPR060C 771 nt13.14□□□□□ -0.31
RAM1P22007 BDH2YAL061W 1254 nt13.11□□□□□ -0.31
RAM1P22007 PTC2YER089C 1395 nt13.09□□□□□ -0.31
RAM1P22007 YHR049C-AYHR049C-A 297 nt13.06□□□□□ -0.32
RAM1P22007 PAM17YKR065C 594 nt13.06□□□□□ -0.32
RAM1P22007 LSM3YLR438C-A 270 nt13.06□□□□□ -0.32
RAM1P22007 WHI5YOR083W 888 nt13.04□□□□□ -0.32
RAM1P22007 YDR509WYDR509W 348 nt13.02□□□□□ -0.33
RAM1P22007 POA1YBR022W 534 nt12.97□□□□□ -0.33
RAM1P22007 BSC6YOL137W 1494 nt12.96□□□□□ -0.34
RAM1P22007 INM2YDR287W 879 nt12.91□□□□□ -0.34
RAM1P22007 NAB2YGL122C 1578 nt12.87□□□□□ -0.35
RAM1P22007 FMP45YDL222C 930 nt12.83□□□□□ -0.36
RAM1P22007 YBL100CYBL100C 315 nt12.83□□□□□ -0.36
RAM1P22007 MRPL8YJL063C 717 nt12.82□□□□□ -0.36
RAM1P22007 YPR011CYPR011C 981 nt12.82□□□□□ -0.36
RAM1P22007 DSK2YMR276W 1122 nt12.81□□□□□ -0.36
RAM1P22007 REG2YBR050C 1017 nt12.81□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 73 ms