Protein–RNA interactions for Protein: P38181

NUP170, Nucleoporin NUP170, yeastyeast

Predictions only

Length 1,502 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP170P38181 YML009W-BYML009W-B 477 nt31.27■■■□□ 2.6
NUP170P38181 NOP1YDL014W 984 nt30.37■■■□□ 2.45
NUP170P38181 NSR1YGR159C 1245 nt29.84■■■□□ 2.37
NUP170P38181 YKL036CYKL036C 393 nt29.1■■■□□ 2.25
NUP170P38181 YJL027CYJL027C 417 nt27.32■■□□□ 1.96
NUP170P38181 SCS3YGL126W 1143 nt27.11■■□□□ 1.93
NUP170P38181 Q0297Q0297 156 nt27■■□□□ 1.91
NUP170P38181 MDJ1YFL016C 1536 nt26.84■■□□□ 1.89
NUP170P38181 SRX1YKL086W 384 nt26.73■■□□□ 1.87
NUP170P38181 YCR051WYCR051W 669 nt25.5■■□□□ 1.67
NUP170P38181 YOL085CYOL085C 342 nt25.07■■□□□ 1.6
NUP170P38181 SCJ1YMR214W 1134 nt24.87■■□□□ 1.57
NUP170P38181 PKP1YIL042C 1185 nt24.81■■□□□ 1.56
NUP170P38181 ATS1YAL020C 1002 nt24.28■■□□□ 1.48
NUP170P38181 RPP1BYDL130W 321 nt24.23■■□□□ 1.47
NUP170P38181 TRN1tP(UGG)A 72 nt23.73■■□□□ 1.39
NUP170P38181 SUF9tP(UGG)F 72 nt23.73■■□□□ 1.39
NUP170P38181 SUF8tP(UGG)H 72 nt23.73■■□□□ 1.39
NUP170P38181 tP(UGG)LtP(UGG)L 72 nt23.73■■□□□ 1.39
NUP170P38181 SUF7tP(UGG)M 72 nt23.73■■□□□ 1.39
NUP170P38181 tP(UGG)N1tP(UGG)N1 72 nt23.73■■□□□ 1.39
NUP170P38181 tP(UGG)N2tP(UGG)N2 72 nt23.73■■□□□ 1.39
NUP170P38181 tP(UGG)O1tP(UGG)O1 72 nt23.73■■□□□ 1.39
NUP170P38181 SUF11tP(UGG)O2 72 nt23.73■■□□□ 1.39
NUP170P38181 DBP2YNL112W 1641 nt23.56■■□□□ 1.36
NUP170P38181 CCC1YLR220W 969 nt23.43■■□□□ 1.34
NUP170P38181 PET122YER153C 765 nt23.23■■□□□ 1.31
NUP170P38181 SCR1SCR1 522 nt23.07■■□□□ 1.28
NUP170P38181 RTC3YHR087W 336 nt22.82■■□□□ 1.24
NUP170P38181 tP(UGG)O3tP(UGG)O3 72 nt22.65■■□□□ 1.22
NUP170P38181 RRN5YLR141W 1092 nt22.47■■□□□ 1.19
NUP170P38181 RSB1YOR049C 1065 nt22.45■■□□□ 1.18
NUP170P38181 YBR190WYBR190W 312 nt22.33■■□□□ 1.17
NUP170P38181 PST2YDR032C 597 nt22.27■■□□□ 1.16
NUP170P38181 YKL097CYKL097C 411 nt22.07■■□□□ 1.12
NUP170P38181 YER088W-BYER088W-B 147 nt22.06■■□□□ 1.12
NUP170P38181 RVS167YDR388W 1449 nt22.02■■□□□ 1.12
NUP170P38181 YDJ1YNL064C 1230 nt21.79■■□□□ 1.08
NUP170P38181 SHR5YOL110W 714 nt21.52■■□□□ 1.04
NUP170P38181 SHU1YHL006C 453 nt21.35■■□□□ 1.01
NUP170P38181 GAR1YHR089C 618 nt21.29■■□□□ 1
NUP170P38181 YOR139CYOR139C 393 nt21.06■□□□□ 0.96
NUP170P38181 DEP1YAL013W 1218 nt21.04■□□□□ 0.96
NUP170P38181 URN1YPR152C 1398 nt20.82■□□□□ 0.92
NUP170P38181 YAL037C-BYAL037C-B 975 nt20.79■□□□□ 0.92
NUP170P38181 NPL3YDR432W 1245 nt20.65■□□□□ 0.9
NUP170P38181 TIR1YER011W 765 nt20.51■□□□□ 0.87
NUP170P38181 SAH1YER043C 1350 nt20.35■□□□□ 0.85
NUP170P38181 PUT4YOR348C 1884 nt20.34■□□□□ 0.85
NUP170P38181 YNL208WYNL208W 600 nt20.28■□□□□ 0.84
NUP170P38181 MNP1YGL068W 585 nt20.27■□□□□ 0.83
NUP170P38181 RPN10YHR200W 807 nt20.27■□□□□ 0.83
NUP170P38181 OPI9YLR338W 858 nt20.25■□□□□ 0.83
NUP170P38181 SRB2YHR041C 633 nt20.12■□□□□ 0.81
NUP170P38181 ARE1YCR048W 1833 nt20.12■□□□□ 0.81
NUP170P38181 YHR049C-AYHR049C-A 297 nt20.09■□□□□ 0.81
NUP170P38181 YOL037CYOL037C 354 nt20.09■□□□□ 0.81
NUP170P38181 SSA1YAL005C 1929 nt20.09■□□□□ 0.81
NUP170P38181 HOM6YJR139C 1080 nt19.97■□□□□ 0.79
NUP170P38181 tM(CAU)CtM(CAU)C 72 nt19.97■□□□□ 0.79
NUP170P38181 IMT4tM(CAU)E 72 nt19.97■□□□□ 0.79
NUP170P38181 IMT3tM(CAU)J3 72 nt19.97■□□□□ 0.79
NUP170P38181 IMT1tM(CAU)O1 72 nt19.97■□□□□ 0.79
NUP170P38181 IMT2tM(CAU)P 72 nt19.97■□□□□ 0.79
NUP170P38181 YGR021WYGR021W 873 nt19.94■□□□□ 0.78
NUP170P38181 WWM1YFL010C 636 nt19.87■□□□□ 0.77
NUP170P38181 POA1YBR022W 534 nt19.82■□□□□ 0.76
NUP170P38181 MOT3YMR070W 1473 nt19.75■□□□□ 0.75
NUP170P38181 YJR018WYJR018W 363 nt19.73■□□□□ 0.75
NUP170P38181 YJR120WYJR120W 351 nt19.71■□□□□ 0.75
NUP170P38181 BSC6YOL137W 1494 nt19.69■□□□□ 0.74
NUP170P38181 RKM5YLR137W 1104 nt19.66■□□□□ 0.74
NUP170P38181 PUN1YLR414C 792 nt19.63■□□□□ 0.73
NUP170P38181 BUD23YCR047C 828 nt19.61■□□□□ 0.73
NUP170P38181 PUS2YGL063W 1113 nt19.58■□□□□ 0.73
NUP170P38181 PTC2YER089C 1395 nt19.51■□□□□ 0.71
NUP170P38181 YFL021C-AYFL021C-A 855 nt19.44■□□□□ 0.7
NUP170P38181 YLR281CYLR281C 468 nt19.41■□□□□ 0.7
NUP170P38181 RPP2BYDR382W 333 nt19.28■□□□□ 0.68
NUP170P38181 WHI5YOR083W 888 nt19.25■□□□□ 0.67
NUP170P38181 SSA3YBL075C 1950 nt19.23■□□□□ 0.67
NUP170P38181 FMP45YDL222C 930 nt19.22■□□□□ 0.67
NUP170P38181 FIS1YIL065C 468 nt19.22■□□□□ 0.67
NUP170P38181 FPR4YLR449W 1179 nt19.15■□□□□ 0.66
NUP170P38181 MRPL8YJL063C 717 nt19.13■□□□□ 0.65
NUP170P38181 YLR236CYLR236C 324 nt19.13■□□□□ 0.65
NUP170P38181 NAB2YGL122C 1578 nt19.11■□□□□ 0.65
NUP170P38181 BDH2YAL061W 1254 nt19.1■□□□□ 0.65
NUP170P38181 DSK2YMR276W 1122 nt19.01■□□□□ 0.63
NUP170P38181 YPR011CYPR011C 981 nt19■□□□□ 0.63
NUP170P38181 PHO4YFR034C 939 nt19■□□□□ 0.63
NUP170P38181 UBX6YJL048C 1191 nt18.97■□□□□ 0.63
NUP170P38181 YBL100CYBL100C 315 nt18.96■□□□□ 0.63
NUP170P38181 DAL1YIR027C 1383 nt18.93■□□□□ 0.62
NUP170P38181 YCH1YGR203W 447 nt18.93■□□□□ 0.62
NUP170P38181 ADO1YJR105W 1023 nt18.83■□□□□ 0.6
NUP170P38181 LSM3YLR438C-A 270 nt18.79■□□□□ 0.6
NUP170P38181 YEL076C-AYEL076C-A 651 nt18.79■□□□□ 0.6
NUP170P38181 YEL076CYEL076C 651 nt18.79■□□□□ 0.6
NUP170P38181 YLR464WYLR464W 651 nt18.79■□□□□ 0.6
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms