Protein–RNA interactions for Protein: P33322

CBF5, H/ACA ribonucleoprotein complex subunit CBF5, yeastyeast

Known RBP RIP-Chip data

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CBF5P33322 YML009W-BYML009W-B 477 nt19.85■□□□□ 0.77
CBF5P33322 NSR1YGR159C 1245 nt19.82■□□□□ 0.76
CBF5P33322 NOP1YDL014W 984 nt19.25■□□□□ 0.67
CBF5P33322 MDJ1YFL016C 1536 nt17.71■□□□□ 0.43
CBF5P33322 YKL036CYKL036C 393 nt17.65■□□□□ 0.42
CBF5P33322 SRX1YKL086W 384 nt16.82■□□□□ 0.28
CBF5P33322 Q0297Q0297 156 nt16.81■□□□□ 0.28
CBF5P33322 SSA3YBL075C 1950 nt16.47■□□□□ 0.23
CBF5P33322 YJL027CYJL027C 417 nt16.46■□□□□ 0.23
CBF5P33322 SCS3YGL126W 1143 nt16■□□□□ 0.15
CBF5P33322 YCR051WYCR051W 669 nt15.94■□□□□ 0.14
CBF5P33322 DBP2YNL112W 1641 nt15.61■□□□□ 0.09
CBF5P33322 TRN1tP(UGG)A 72 nt15.28■□□□□ 0.04
CBF5P33322 SUF9tP(UGG)F 72 nt15.28■□□□□ 0.04
CBF5P33322 SUF8tP(UGG)H 72 nt15.28■□□□□ 0.04
CBF5P33322 tP(UGG)LtP(UGG)L 72 nt15.28■□□□□ 0.04
CBF5P33322 SUF7tP(UGG)M 72 nt15.28■□□□□ 0.04
CBF5P33322 tP(UGG)N1tP(UGG)N1 72 nt15.28■□□□□ 0.04
CBF5P33322 tP(UGG)N2tP(UGG)N2 72 nt15.28■□□□□ 0.04
CBF5P33322 tP(UGG)O1tP(UGG)O1 72 nt15.28■□□□□ 0.04
CBF5P33322 SUF11tP(UGG)O2 72 nt15.28■□□□□ 0.04
CBF5P33322 YOL085CYOL085C 342 nt15.28■□□□□ 0.04
CBF5P33322 YBR190WYBR190W 312 nt15.13■□□□□ 0.01
CBF5P33322 CCC1YLR220W 969 nt15.11■□□□□ 0.01
CBF5P33322 RPP1BYDL130W 321 nt15.08■□□□□ 0
CBF5P33322 PKP1YIL042C 1185 nt15.06■□□□□ 0
CBF5P33322 RTC3YHR087W 336 nt14.79□□□□□ -0.04
CBF5P33322 RVS167YDR388W 1449 nt14.68□□□□□ -0.06
CBF5P33322 SCJ1YMR214W 1134 nt14.56□□□□□ -0.08
CBF5P33322 PET122YER153C 765 nt14.42□□□□□ -0.1
CBF5P33322 tP(UGG)O3tP(UGG)O3 72 nt14.41□□□□□ -0.1
CBF5P33322 PUT4YOR348C 1884 nt14.33□□□□□ -0.12
CBF5P33322 ATS1YAL020C 1002 nt14.26□□□□□ -0.13
CBF5P33322 SCR1SCR1 522 nt14.25□□□□□ -0.13
CBF5P33322 SHR5YOL110W 714 nt14.14□□□□□ -0.15
CBF5P33322 SSA4YER103W 1929 nt14.12□□□□□ -0.15
CBF5P33322 PAC11YDR488C 1602 nt14.03□□□□□ -0.16
CBF5P33322 SPT5YML010W 3192 nt13.99□□□□□ -0.17
CBF5P33322 RRN5YLR141W 1092 nt13.99□□□□□ -0.17
CBF5P33322 YDJ1YNL064C 1230 nt13.94□□□□□ -0.18
CBF5P33322 NVJ2YPR091C 2313 nt13.88□□□□□ -0.19
CBF5P33322 URN1YPR152C 1398 nt13.81□□□□□ -0.2
CBF5P33322 DEP1YAL013W 1218 nt13.76□□□□□ -0.21
CBF5P33322 BDF1YLR399C 2061 nt13.72□□□□□ -0.21
CBF5P33322 POA1YBR022W 534 nt13.72□□□□□ -0.21
CBF5P33322 YER088W-BYER088W-B 147 nt13.71□□□□□ -0.21
CBF5P33322 BSC6YOL137W 1494 nt13.7□□□□□ -0.22
CBF5P33322 ARE1YCR048W 1833 nt13.69□□□□□ -0.22
CBF5P33322 RSB1YOR049C 1065 nt13.68□□□□□ -0.22
CBF5P33322 GAR1YHR089C 618 nt13.65□□□□□ -0.22
CBF5P33322 OPI9YLR338W 858 nt13.62□□□□□ -0.23
CBF5P33322 RPN10YHR200W 807 nt13.59□□□□□ -0.23
CBF5P33322 SAH1YER043C 1350 nt13.56□□□□□ -0.24
CBF5P33322 FPS1YLL043W 2010 nt13.54□□□□□ -0.24
CBF5P33322 YNL208WYNL208W 600 nt13.54□□□□□ -0.24
CBF5P33322 TAT1YBR069C 1860 nt13.53□□□□□ -0.24
CBF5P33322 YHR049C-AYHR049C-A 297 nt13.52□□□□□ -0.25
CBF5P33322 PUN1YLR414C 792 nt13.24□□□□□ -0.29 RIP-Chip
CBF5P33322 PST2YDR032C 597 nt13.23□□□□□ -0.29
CBF5P33322 YJL225CYJL225C 5277 nt13.22□□□□□ -0.29
CBF5P33322 TIR1YER011W 765 nt13.19□□□□□ -0.3
CBF5P33322 YJR018WYJR018W 363 nt13.16□□□□□ -0.3
CBF5P33322 SSA1YAL005C 1929 nt13.11□□□□□ -0.31
CBF5P33322 BUD23YCR047C 828 nt13.09□□□□□ -0.31
CBF5P33322 PTC2YER089C 1395 nt13.08□□□□□ -0.31
CBF5P33322 MEP2YNL142W 1500 nt13.03□□□□□ -0.32
CBF5P33322 NAB2YGL122C 1578 nt12.94□□□□□ -0.34
CBF5P33322 YJR120WYJR120W 351 nt12.92□□□□□ -0.34
CBF5P33322 RPP2BYDR382W 333 nt12.88□□□□□ -0.35
CBF5P33322 SRB2YHR041C 633 nt12.8□□□□□ -0.36
CBF5P33322 UME6YDR207C 2511 nt12.77□□□□□ -0.37
CBF5P33322 RDN37-1RDN37-1 5354 nt12.77□□□□□ -0.37
CBF5P33322 RDN37-2RDN37-2 5354 nt12.77□□□□□ -0.37
CBF5P33322 FIS1YIL065C 468 nt12.75□□□□□ -0.37
CBF5P33322 DAL1YIR027C 1383 nt12.74□□□□□ -0.37
CBF5P33322 YBR220CYBR220C 1683 nt12.73□□□□□ -0.37
CBF5P33322 SHU1YHL006C 453 nt12.72□□□□□ -0.37
CBF5P33322 INM2YDR287W 879 nt12.71□□□□□ -0.37
CBF5P33322 FPR4YLR449W 1179 nt12.71□□□□□ -0.37
CBF5P33322 YMR090WYMR090W 684 nt12.7□□□□□ -0.38
CBF5P33322 DCW1YKL046C 1350 nt12.69□□□□□ -0.38
CBF5P33322 YKL097CYKL097C 411 nt12.66□□□□□ -0.38
CBF5P33322 PCH2YBR186W 1695 nt12.65□□□□□ -0.38
CBF5P33322 PHO4YFR034C 939 nt12.63□□□□□ -0.39
CBF5P33322 GUT2YIL155C 1950 nt12.61□□□□□ -0.39
CBF5P33322 WWM1YFL010C 636 nt12.59□□□□□ -0.39
CBF5P33322 SEC11YIR022W 504 nt12.59□□□□□ -0.39
CBF5P33322 BDH2YAL061W 1254 nt12.59□□□□□ -0.39
CBF5P33322 YBL100CYBL100C 315 nt12.57□□□□□ -0.4
CBF5P33322 YAL037C-BYAL037C-B 975 nt12.55□□□□□ -0.4
CBF5P33322 EMI2YDR516C 1503 nt12.55□□□□□ -0.4
CBF5P33322 YGR021WYGR021W 873 nt12.5□□□□□ -0.41
CBF5P33322 SDH1YKL148C 1923 nt12.47□□□□□ -0.41
CBF5P33322 YPS1YLR120C 1710 nt12.45□□□□□ -0.42
CBF5P33322 HOM6YJR139C 1080 nt12.44□□□□□ -0.42
CBF5P33322 FUN26YAL022C 1554 nt12.42□□□□□ -0.42
CBF5P33322 YFL021C-AYFL021C-A 855 nt12.41□□□□□ -0.42
CBF5P33322 LSM3YLR438C-A 270 nt12.41□□□□□ -0.42
CBF5P33322 YDL221WYDL221W 552 nt12.38□□□□□ -0.43
CBF5P33322 YHR165W-AYHR165W-A 312 nt12.37□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms