Protein–RNA interactions for Protein: P38222

RKM3, Ribosomal lysine N-methyltransferase 3, yeastyeast

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKM3P38222 NSR1YGR159C 1245 nt22.63■■□□□ 1.21
RKM3P38222 YML009W-BYML009W-B 477 nt22.38■■□□□ 1.17
RKM3P38222 NOP1YDL014W 984 nt21.41■■□□□ 1.02
RKM3P38222 MDJ1YFL016C 1536 nt20.77■□□□□ 0.92
RKM3P38222 YKL036CYKL036C 393 nt19.29■□□□□ 0.68
RKM3P38222 YJL027CYJL027C 417 nt19.01■□□□□ 0.63
RKM3P38222 SRX1YKL086W 384 nt18.75■□□□□ 0.59
RKM3P38222 Q0297Q0297 156 nt18.6■□□□□ 0.57
RKM3P38222 DBP2YNL112W 1641 nt18.14■□□□□ 0.49
RKM3P38222 YCR051WYCR051W 669 nt17.79■□□□□ 0.44
RKM3P38222 YBR190WYBR190W 312 nt17.73■□□□□ 0.43
RKM3P38222 RTC3YHR087W 336 nt17.35■□□□□ 0.37
RKM3P38222 SCS3YGL126W 1143 nt17.34■□□□□ 0.37
RKM3P38222 TRN1tP(UGG)A 72 nt17.33■□□□□ 0.36
RKM3P38222 SUF9tP(UGG)F 72 nt17.33■□□□□ 0.36
RKM3P38222 SUF8tP(UGG)H 72 nt17.33■□□□□ 0.36
RKM3P38222 tP(UGG)LtP(UGG)L 72 nt17.33■□□□□ 0.36
RKM3P38222 SUF7tP(UGG)M 72 nt17.33■□□□□ 0.36
RKM3P38222 tP(UGG)N1tP(UGG)N1 72 nt17.33■□□□□ 0.36
RKM3P38222 tP(UGG)N2tP(UGG)N2 72 nt17.33■□□□□ 0.36
RKM3P38222 tP(UGG)O1tP(UGG)O1 72 nt17.33■□□□□ 0.36
RKM3P38222 SUF11tP(UGG)O2 72 nt17.33■□□□□ 0.36
RKM3P38222 CCC1YLR220W 969 nt17.18■□□□□ 0.34
RKM3P38222 SSA3YBL075C 1950 nt16.88■□□□□ 0.29
RKM3P38222 RVS167YDR388W 1449 nt16.8■□□□□ 0.28
RKM3P38222 SCJ1YMR214W 1134 nt16.76■□□□□ 0.27
RKM3P38222 YOL085CYOL085C 342 nt16.76■□□□□ 0.27
RKM3P38222 RPP1BYDL130W 321 nt16.7■□□□□ 0.26
RKM3P38222 PKP1YIL042C 1185 nt16.65■□□□□ 0.26
RKM3P38222 PUT4YOR348C 1884 nt16.62■□□□□ 0.25
RKM3P38222 tP(UGG)O3tP(UGG)O3 72 nt16.2■□□□□ 0.18
RKM3P38222 ARE1YCR048W 1833 nt16.16■□□□□ 0.18
RKM3P38222 SHR5YOL110W 714 nt16.12■□□□□ 0.17
RKM3P38222 PET122YER153C 765 nt16.1■□□□□ 0.17
RKM3P38222 URN1YPR152C 1398 nt16.05■□□□□ 0.16
RKM3P38222 POA1YBR022W 534 nt16.04■□□□□ 0.16
RKM3P38222 SAH1YER043C 1350 nt16■□□□□ 0.15
RKM3P38222 YHR049C-AYHR049C-A 297 nt15.95■□□□□ 0.14
RKM3P38222 DEP1YAL013W 1218 nt15.95■□□□□ 0.14
RKM3P38222 OPI9YLR338W 858 nt15.9■□□□□ 0.14
RKM3P38222 BSC6YOL137W 1494 nt15.81■□□□□ 0.12
RKM3P38222 SCR1SCR1 522 nt15.66■□□□□ 0.1
RKM3P38222 YDJ1YNL064C 1230 nt15.62■□□□□ 0.09
RKM3P38222 RPN10YHR200W 807 nt15.59■□□□□ 0.09
RKM3P38222 RRN5YLR141W 1092 nt15.54■□□□□ 0.08
RKM3P38222 YNL208WYNL208W 600 nt15.53■□□□□ 0.08
RKM3P38222 SPT5YML010W 3192 nt15.52■□□□□ 0.08
RKM3P38222 BUD23YCR047C 828 nt15.52■□□□□ 0.08
RKM3P38222 GAR1YHR089C 618 nt15.44■□□□□ 0.06
RKM3P38222 PUN1YLR414C 792 nt15.4■□□□□ 0.06
RKM3P38222 PTC2YER089C 1395 nt15.37■□□□□ 0.05
RKM3P38222 ATS1YAL020C 1002 nt15.31■□□□□ 0.04
RKM3P38222 YJR018WYJR018W 363 nt15.25■□□□□ 0.03
RKM3P38222 YER088W-BYER088W-B 147 nt15.24■□□□□ 0.03
RKM3P38222 SSA4YER103W 1929 nt15.21■□□□□ 0.02
RKM3P38222 NAB2YGL122C 1578 nt15.2■□□□□ 0.02
RKM3P38222 RSB1YOR049C 1065 nt15.05■□□□□ -0
RKM3P38222 FIS1YIL065C 468 nt15.03■□□□□ -0
RKM3P38222 YJR120WYJR120W 351 nt15.01□□□□□ -0.01
RKM3P38222 TIR1YER011W 765 nt14.92□□□□□ -0.02
RKM3P38222 DAL1YIR027C 1383 nt14.92□□□□□ -0.02
RKM3P38222 SSA1YAL005C 1929 nt14.92□□□□□ -0.02
RKM3P38222 FPR4YLR449W 1179 nt14.91□□□□□ -0.02
RKM3P38222 MEP2YNL142W 1500 nt14.87□□□□□ -0.03
RKM3P38222 PHO4YFR034C 939 nt14.81□□□□□ -0.04
RKM3P38222 RPP2BYDR382W 333 nt14.74□□□□□ -0.05
RKM3P38222 YPS1YLR120C 1710 nt14.72□□□□□ -0.05
RKM3P38222 INM2YDR287W 879 nt14.71□□□□□ -0.05
RKM3P38222 DCW1YKL046C 1350 nt14.7□□□□□ -0.06
RKM3P38222 BDF1YLR399C 2061 nt14.69□□□□□ -0.06
RKM3P38222 SRB2YHR041C 633 nt14.66□□□□□ -0.06
RKM3P38222 YHR165W-AYHR165W-A 312 nt14.58□□□□□ -0.08
RKM3P38222 YBL100CYBL100C 315 nt14.56□□□□□ -0.08
RKM3P38222 YDR095CYDR095C 411 nt14.52□□□□□ -0.09
RKM3P38222 TAT1YBR069C 1860 nt14.48□□□□□ -0.09
RKM3P38222 EMI2YDR516C 1503 nt14.43□□□□□ -0.1
RKM3P38222 BDH2YAL061W 1254 nt14.39□□□□□ -0.11
RKM3P38222 FUN26YAL022C 1554 nt14.38□□□□□ -0.11
RKM3P38222 YBR220CYBR220C 1683 nt14.36□□□□□ -0.11
RKM3P38222 CAC2YML102W 1407 nt14.32□□□□□ -0.12
RKM3P38222 PTP1YDL230W 1008 nt14.3□□□□□ -0.12
RKM3P38222 PST2YDR032C 597 nt14.28□□□□□ -0.12
RKM3P38222 YDL221WYDL221W 552 nt14.27□□□□□ -0.13
RKM3P38222 YMR090WYMR090W 684 nt14.27□□□□□ -0.13
RKM3P38222 ALF1YNL148C 765 nt14.24□□□□□ -0.13
RKM3P38222 RPP2AYOL039W 321 nt14.23□□□□□ -0.13
RKM3P38222 WWM1YFL010C 636 nt14.22□□□□□ -0.13
RKM3P38222 SDH1YKL148C 1923 nt14.21□□□□□ -0.14
RKM3P38222 TRM9YML014W 840 nt14.19□□□□□ -0.14
RKM3P38222 CCT6YDR188W 1641 nt14.11□□□□□ -0.15
RKM3P38222 IRC15YPL017C 1500 nt14.09□□□□□ -0.15
RKM3P38222 LSM3YLR438C-A 270 nt14.05□□□□□ -0.16
RKM3P38222 SIS1YNL007C 1059 nt14.05□□□□□ -0.16
RKM3P38222 SCC4YER147C 1875 nt14.04□□□□□ -0.16
RKM3P38222 GIS3YLR094C 1509 nt14□□□□□ -0.17
RKM3P38222 SUF2tP(AGG)C 72 nt13.97□□□□□ -0.17
RKM3P38222 SUF10tP(AGG)N 72 nt13.97□□□□□ -0.17
RKM3P38222 ART5YGR068C 1761 nt13.96□□□□□ -0.17
RKM3P38222 GFD2YCL036W 1701 nt13.96□□□□□ -0.17
RKM3P38222 RTS2YOR077W 699 nt13.93□□□□□ -0.18
Retrieved 100 of 7,029 protein–RNA pairs in 8.3 ms