Protein–RNA interactions for Protein: Q06164

MMS22, E3 ubiquitin-protein ligase substrate receptor MMS22, yeastyeast

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MMS22Q06164 YML009W-BYML009W-B 477 nt32.86■■■□□ 2.85
MMS22Q06164 NOP1YDL014W 984 nt31.91■■■□□ 2.7
MMS22Q06164 NSR1YGR159C 1245 nt31.56■■■□□ 2.64
MMS22Q06164 YKL036CYKL036C 393 nt30.38■■■□□ 2.45
MMS22Q06164 YJL027CYJL027C 417 nt28.53■■■□□ 2.16
MMS22Q06164 Q0297Q0297 156 nt28.27■■■□□ 2.12
MMS22Q06164 SCS3YGL126W 1143 nt28.2■■■□□ 2.1
MMS22Q06164 MDJ1YFL016C 1536 nt28.17■■■□□ 2.1
MMS22Q06164 SRX1YKL086W 384 nt28.02■■■□□ 2.08
MMS22Q06164 YCR051WYCR051W 669 nt26.76■■□□□ 1.87
MMS22Q06164 YOL085CYOL085C 342 nt26.24■■□□□ 1.79
MMS22Q06164 PKP1YIL042C 1185 nt25.99■■□□□ 1.75
MMS22Q06164 SCJ1YMR214W 1134 nt25.66■■□□□ 1.7
MMS22Q06164 RPP1BYDL130W 321 nt25.4■■□□□ 1.66
MMS22Q06164 ATS1YAL020C 1002 nt25.28■■□□□ 1.64
MMS22Q06164 TRN1tP(UGG)A 72 nt24.96■■□□□ 1.59
MMS22Q06164 SUF9tP(UGG)F 72 nt24.96■■□□□ 1.59
MMS22Q06164 SUF8tP(UGG)H 72 nt24.96■■□□□ 1.59
MMS22Q06164 tP(UGG)LtP(UGG)L 72 nt24.96■■□□□ 1.59
MMS22Q06164 SUF7tP(UGG)M 72 nt24.96■■□□□ 1.59
MMS22Q06164 tP(UGG)N1tP(UGG)N1 72 nt24.96■■□□□ 1.59
MMS22Q06164 tP(UGG)N2tP(UGG)N2 72 nt24.96■■□□□ 1.59
MMS22Q06164 tP(UGG)O1tP(UGG)O1 72 nt24.96■■□□□ 1.59
MMS22Q06164 SUF11tP(UGG)O2 72 nt24.96■■□□□ 1.59
MMS22Q06164 DBP2YNL112W 1641 nt24.81■■□□□ 1.56
MMS22Q06164 CCC1YLR220W 969 nt24.75■■□□□ 1.55
MMS22Q06164 PET122YER153C 765 nt24.36■■□□□ 1.49
MMS22Q06164 SCR1SCR1 522 nt24.13■■□□□ 1.45
MMS22Q06164 tP(UGG)O3tP(UGG)O3 72 nt23.82■■□□□ 1.4
MMS22Q06164 RTC3YHR087W 336 nt23.62■■□□□ 1.37
MMS22Q06164 RRN5YLR141W 1092 nt23.6■■□□□ 1.37
MMS22Q06164 YBR190WYBR190W 312 nt23.58■■□□□ 1.37
MMS22Q06164 RSB1YOR049C 1065 nt23.48■■□□□ 1.35
MMS22Q06164 RVS167YDR388W 1449 nt23.27■■□□□ 1.32
MMS22Q06164 PST2YDR032C 597 nt23.23■■□□□ 1.31
MMS22Q06164 YER088W-BYER088W-B 147 nt23.16■■□□□ 1.3
MMS22Q06164 YDJ1YNL064C 1230 nt22.9■■□□□ 1.26
MMS22Q06164 YKL097CYKL097C 411 nt22.87■■□□□ 1.25
MMS22Q06164 SHR5YOL110W 714 nt22.7■■□□□ 1.22
MMS22Q06164 GAR1YHR089C 618 nt22.45■■□□□ 1.18
MMS22Q06164 SHU1YHL006C 453 nt22.27■■□□□ 1.16
MMS22Q06164 DEP1YAL013W 1218 nt22.03■■□□□ 1.12
MMS22Q06164 YOR139CYOR139C 393 nt21.87■■□□□ 1.09
MMS22Q06164 URN1YPR152C 1398 nt21.87■■□□□ 1.09
MMS22Q06164 YAL037C-BYAL037C-B 975 nt21.77■■□□□ 1.08
MMS22Q06164 TIR1YER011W 765 nt21.61■■□□□ 1.05
MMS22Q06164 YNL208WYNL208W 600 nt21.48■■□□□ 1.03
MMS22Q06164 PUT4YOR348C 1884 nt21.46■■□□□ 1.03
MMS22Q06164 NPL3YDR432W 1245 nt21.45■■□□□ 1.03
MMS22Q06164 SAH1YER043C 1350 nt21.37■■□□□ 1.01
MMS22Q06164 RPN10YHR200W 807 nt21.37■■□□□ 1.01
MMS22Q06164 OPI9YLR338W 858 nt21.36■■□□□ 1.01
MMS22Q06164 SRB2YHR041C 633 nt21.23■□□□□ 0.99
MMS22Q06164 SSA1YAL005C 1929 nt21.22■□□□□ 0.99
MMS22Q06164 MNP1YGL068W 585 nt21.2■□□□□ 0.98
MMS22Q06164 ARE1YCR048W 1833 nt21.18■□□□□ 0.98
MMS22Q06164 YHR049C-AYHR049C-A 297 nt21.08■□□□□ 0.97
MMS22Q06164 HOM6YJR139C 1080 nt20.93■□□□□ 0.94
MMS22Q06164 WWM1YFL010C 636 nt20.9■□□□□ 0.94
MMS22Q06164 YOL037CYOL037C 354 nt20.9■□□□□ 0.94
MMS22Q06164 YGR021WYGR021W 873 nt20.87■□□□□ 0.93
MMS22Q06164 POA1YBR022W 534 nt20.83■□□□□ 0.93
MMS22Q06164 tM(CAU)CtM(CAU)C 72 nt20.8■□□□□ 0.92
MMS22Q06164 IMT4tM(CAU)E 72 nt20.8■□□□□ 0.92
MMS22Q06164 IMT3tM(CAU)J3 72 nt20.8■□□□□ 0.92
MMS22Q06164 IMT1tM(CAU)O1 72 nt20.8■□□□□ 0.92
MMS22Q06164 IMT2tM(CAU)P 72 nt20.8■□□□□ 0.92
MMS22Q06164 YJR018WYJR018W 363 nt20.75■□□□□ 0.91
MMS22Q06164 YJR120WYJR120W 351 nt20.74■□□□□ 0.91
MMS22Q06164 PUN1YLR414C 792 nt20.71■□□□□ 0.91
MMS22Q06164 RKM5YLR137W 1104 nt20.62■□□□□ 0.89
MMS22Q06164 BUD23YCR047C 828 nt20.53■□□□□ 0.88
MMS22Q06164 PTC2YER089C 1395 nt20.53■□□□□ 0.88
MMS22Q06164 MOT3YMR070W 1473 nt20.46■□□□□ 0.87
MMS22Q06164 BSC6YOL137W 1494 nt20.44■□□□□ 0.86
MMS22Q06164 PUS2YGL063W 1113 nt20.44■□□□□ 0.86
MMS22Q06164 YFL021C-AYFL021C-A 855 nt20.4■□□□□ 0.86
MMS22Q06164 RPP2BYDR382W 333 nt20.37■□□□□ 0.85
MMS22Q06164 YLR281CYLR281C 468 nt20.29■□□□□ 0.84
MMS22Q06164 SSA3YBL075C 1950 nt20.27■□□□□ 0.84
MMS22Q06164 FIS1YIL065C 468 nt20.23■□□□□ 0.83
MMS22Q06164 WHI5YOR083W 888 nt20.16■□□□□ 0.82
MMS22Q06164 NAB2YGL122C 1578 nt20.15■□□□□ 0.82
MMS22Q06164 BDH2YAL061W 1254 nt20.14■□□□□ 0.81
MMS22Q06164 FPR4YLR449W 1179 nt20.08■□□□□ 0.81
MMS22Q06164 FMP45YDL222C 930 nt20.05■□□□□ 0.8
MMS22Q06164 YLR236CYLR236C 324 nt19.99■□□□□ 0.79
MMS22Q06164 PHO4YFR034C 939 nt19.97■□□□□ 0.79
MMS22Q06164 DAL1YIR027C 1383 nt19.97■□□□□ 0.79
MMS22Q06164 YBL100CYBL100C 315 nt19.93■□□□□ 0.78
MMS22Q06164 YPR011CYPR011C 981 nt19.93■□□□□ 0.78
MMS22Q06164 LSM3YLR438C-A 270 nt19.86■□□□□ 0.77
MMS22Q06164 DSK2YMR276W 1122 nt19.86■□□□□ 0.77
MMS22Q06164 INM2YDR287W 879 nt19.75■□□□□ 0.75
MMS22Q06164 YCH1YGR203W 447 nt19.73■□□□□ 0.75
MMS22Q06164 MRPL8YJL063C 717 nt19.71■□□□□ 0.75
MMS22Q06164 FUN26YAL022C 1554 nt19.61■□□□□ 0.73
MMS22Q06164 YLR154C-GYLR154C-G 150 nt19.6■□□□□ 0.73
MMS22Q06164 UBX6YJL048C 1191 nt19.58■□□□□ 0.72
MMS22Q06164 LPX1YOR084W 1164 nt19.55■□□□□ 0.72
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms