Protein–RNA interactions for Protein: P53076

VID30, Vacuolar import and degradation protein 30, yeastyeast

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VID30P53076 YML009W-BYML009W-B 477 nt22.44■■□□□ 1.18
VID30P53076 NSR1YGR159C 1245 nt22.28■■□□□ 1.16
VID30P53076 NOP1YDL014W 984 nt21.83■■□□□ 1.09
VID30P53076 YKL036CYKL036C 393 nt20.07■□□□□ 0.8
VID30P53076 MDJ1YFL016C 1536 nt19.8■□□□□ 0.76
VID30P53076 Q0297Q0297 156 nt19.01■□□□□ 0.63
VID30P53076 SRX1YKL086W 384 nt19■□□□□ 0.63
VID30P53076 YJL027CYJL027C 417 nt18.78■□□□□ 0.6
VID30P53076 SCS3YGL126W 1143 nt18.48■□□□□ 0.55
VID30P53076 YCR051WYCR051W 669 nt18.1■□□□□ 0.49
VID30P53076 DBP2YNL112W 1641 nt17.44■□□□□ 0.38
VID30P53076 SCJ1YMR214W 1134 nt17.44■□□□□ 0.38
VID30P53076 YOL085CYOL085C 342 nt17.37■□□□□ 0.37
VID30P53076 TRN1tP(UGG)A 72 nt17.17■□□□□ 0.34
VID30P53076 SUF9tP(UGG)F 72 nt17.17■□□□□ 0.34
VID30P53076 SUF8tP(UGG)H 72 nt17.17■□□□□ 0.34
VID30P53076 tP(UGG)LtP(UGG)L 72 nt17.17■□□□□ 0.34
VID30P53076 SUF7tP(UGG)M 72 nt17.17■□□□□ 0.34
VID30P53076 tP(UGG)N1tP(UGG)N1 72 nt17.17■□□□□ 0.34
VID30P53076 tP(UGG)N2tP(UGG)N2 72 nt17.17■□□□□ 0.34
VID30P53076 tP(UGG)O1tP(UGG)O1 72 nt17.17■□□□□ 0.34
VID30P53076 SUF11tP(UGG)O2 72 nt17.17■□□□□ 0.34
VID30P53076 PKP1YIL042C 1185 nt17.15■□□□□ 0.34
VID30P53076 CCC1YLR220W 969 nt17.11■□□□□ 0.33
VID30P53076 RPP1BYDL130W 321 nt17.09■□□□□ 0.33
VID30P53076 YBR190WYBR190W 312 nt16.88■□□□□ 0.29
VID30P53076 ATS1YAL020C 1002 nt16.76■□□□□ 0.27
VID30P53076 RTC3YHR087W 336 nt16.61■□□□□ 0.25
VID30P53076 RVS167YDR388W 1449 nt16.53■□□□□ 0.24
VID30P53076 PET122YER153C 765 nt16.32■□□□□ 0.2
VID30P53076 tP(UGG)O3tP(UGG)O3 72 nt16.27■□□□□ 0.2
VID30P53076 SCR1SCR1 522 nt16.22■□□□□ 0.19
VID30P53076 SHR5YOL110W 714 nt15.89■□□□□ 0.13
VID30P53076 RRN5YLR141W 1092 nt15.87■□□□□ 0.13
VID30P53076 SSA3YBL075C 1950 nt15.84■□□□□ 0.13
VID30P53076 YDJ1YNL064C 1230 nt15.72■□□□□ 0.11
VID30P53076 RSB1YOR049C 1065 nt15.57■□□□□ 0.08
VID30P53076 YER088W-BYER088W-B 147 nt15.55■□□□□ 0.08
VID30P53076 DEP1YAL013W 1218 nt15.48■□□□□ 0.07
VID30P53076 URN1YPR152C 1398 nt15.48■□□□□ 0.07
VID30P53076 GAR1YHR089C 618 nt15.44■□□□□ 0.06
VID30P53076 PST2YDR032C 597 nt15.4■□□□□ 0.06
VID30P53076 PUT4YOR348C 1884 nt15.31■□□□□ 0.04
VID30P53076 RPN10YHR200W 807 nt15.28■□□□□ 0.04
VID30P53076 YNL208WYNL208W 600 nt15.23■□□□□ 0.03
VID30P53076 OPI9YLR338W 858 nt15.21■□□□□ 0.03
VID30P53076 YKL097CYKL097C 411 nt15.2■□□□□ 0.02
VID30P53076 SAH1YER043C 1350 nt15.15■□□□□ 0.02
VID30P53076 ARE1YCR048W 1833 nt15.03■□□□□ -0
VID30P53076 TIR1YER011W 765 nt14.89□□□□□ -0.03
VID30P53076 POA1YBR022W 534 nt14.89□□□□□ -0.03
VID30P53076 YHR049C-AYHR049C-A 297 nt14.88□□□□□ -0.03
VID30P53076 PUN1YLR414C 792 nt14.81□□□□□ -0.04
VID30P53076 YJR018WYJR018W 363 nt14.76□□□□□ -0.05
VID30P53076 SSA1YAL005C 1929 nt14.68□□□□□ -0.06
VID30P53076 PTC2YER089C 1395 nt14.65□□□□□ -0.06
VID30P53076 BUD23YCR047C 828 nt14.59□□□□□ -0.07
VID30P53076 SHU1YHL006C 453 nt14.56□□□□□ -0.08
VID30P53076 BSC6YOL137W 1494 nt14.54□□□□□ -0.08
VID30P53076 RPP2BYDR382W 333 nt14.51□□□□□ -0.09
VID30P53076 NAB2YGL122C 1578 nt14.44□□□□□ -0.1
VID30P53076 YOR139CYOR139C 393 nt14.43□□□□□ -0.1
VID30P53076 YJR120WYJR120W 351 nt14.41□□□□□ -0.1
VID30P53076 SRB2YHR041C 633 nt14.38□□□□□ -0.11
VID30P53076 YAL037C-BYAL037C-B 975 nt14.3□□□□□ -0.12
VID30P53076 FPR4YLR449W 1179 nt14.3□□□□□ -0.12
VID30P53076 DAL1YIR027C 1383 nt14.25□□□□□ -0.13
VID30P53076 INM2YDR287W 879 nt14.25□□□□□ -0.13
VID30P53076 WWM1YFL010C 636 nt14.23□□□□□ -0.13
VID30P53076 YGR021WYGR021W 873 nt14.16□□□□□ -0.14
VID30P53076 FIS1YIL065C 468 nt14.16□□□□□ -0.14
VID30P53076 BDH2YAL061W 1254 nt14.15□□□□□ -0.14
VID30P53076 NPL3YDR432W 1245 nt14.14□□□□□ -0.15
VID30P53076 YBL100CYBL100C 315 nt14.11□□□□□ -0.15
VID30P53076 PHO4YFR034C 939 nt14.1□□□□□ -0.15
VID30P53076 HOM6YJR139C 1080 nt14.06□□□□□ -0.16
VID30P53076 MNP1YGL068W 585 nt14□□□□□ -0.17
VID30P53076 YFL021C-AYFL021C-A 855 nt13.99□□□□□ -0.17
VID30P53076 LSM3YLR438C-A 270 nt13.97□□□□□ -0.17
VID30P53076 TRM9YML014W 840 nt13.95□□□□□ -0.18
VID30P53076 FUN26YAL022C 1554 nt13.93□□□□□ -0.18
VID30P53076 RKM5YLR137W 1104 nt13.87□□□□□ -0.19
VID30P53076 tM(CAU)CtM(CAU)C 72 nt13.82□□□□□ -0.2
VID30P53076 IMT4tM(CAU)E 72 nt13.82□□□□□ -0.2
VID30P53076 IMT3tM(CAU)J3 72 nt13.82□□□□□ -0.2
VID30P53076 IMT1tM(CAU)O1 72 nt13.82□□□□□ -0.2
VID30P53076 IMT2tM(CAU)P 72 nt13.82□□□□□ -0.2
VID30P53076 YPS1YLR120C 1710 nt13.81□□□□□ -0.2
VID30P53076 ALF1YNL148C 765 nt13.8□□□□□ -0.2
VID30P53076 YOL037CYOL037C 354 nt13.77□□□□□ -0.21
VID30P53076 CCT6YDR188W 1641 nt13.74□□□□□ -0.21
VID30P53076 YHR165W-AYHR165W-A 312 nt13.73□□□□□ -0.21
VID30P53076 SPT5YML010W 3192 nt13.73□□□□□ -0.21
VID30P53076 YDR095CYDR095C 411 nt13.7□□□□□ -0.22
VID30P53076 SUF2tP(AGG)C 72 nt13.69□□□□□ -0.22
VID30P53076 SUF10tP(AGG)N 72 nt13.69□□□□□ -0.22
VID30P53076 MEP2YNL142W 1500 nt13.64□□□□□ -0.23
VID30P53076 MOT3YMR070W 1473 nt13.61□□□□□ -0.23
VID30P53076 PAC11YDR488C 1602 nt13.57□□□□□ -0.24
VID30P53076 NVJ2YPR091C 2313 nt13.5□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms