Protein–RNA interactions for Protein: P39929

SNF7, Vacuolar-sorting protein SNF7, yeastyeast

Known RBP Predictions only

Length 240 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF7P39929 NSR1YGR159C 1245 nt23■■□□□ 1.27
SNF7P39929 YML009W-BYML009W-B 477 nt22.56■■□□□ 1.2
SNF7P39929 NOP1YDL014W 984 nt21.91■■□□□ 1.1
SNF7P39929 MDJ1YFL016C 1536 nt21.29■■□□□ 1
SNF7P39929 YKL036CYKL036C 393 nt20.13■□□□□ 0.81
SNF7P39929 YJL027CYJL027C 417 nt19.49■□□□□ 0.71
SNF7P39929 SRX1YKL086W 384 nt19.04■□□□□ 0.64
SNF7P39929 Q0297Q0297 156 nt19.03■□□□□ 0.64
SNF7P39929 DBP2YNL112W 1641 nt18.5■□□□□ 0.55
SNF7P39929 YBR190WYBR190W 312 nt18.25■□□□□ 0.51
SNF7P39929 SCS3YGL126W 1143 nt18.24■□□□□ 0.51
SNF7P39929 YCR051WYCR051W 669 nt18.18■□□□□ 0.5
SNF7P39929 SSA3YBL075C 1950 nt18.03■□□□□ 0.48
SNF7P39929 RTC3YHR087W 336 nt17.86■□□□□ 0.45
SNF7P39929 TRN1tP(UGG)A 72 nt17.51■□□□□ 0.39
SNF7P39929 SUF9tP(UGG)F 72 nt17.51■□□□□ 0.39
SNF7P39929 SUF8tP(UGG)H 72 nt17.51■□□□□ 0.39
SNF7P39929 tP(UGG)LtP(UGG)L 72 nt17.51■□□□□ 0.39
SNF7P39929 SUF7tP(UGG)M 72 nt17.51■□□□□ 0.39
SNF7P39929 tP(UGG)N1tP(UGG)N1 72 nt17.51■□□□□ 0.39
SNF7P39929 tP(UGG)N2tP(UGG)N2 72 nt17.51■□□□□ 0.39
SNF7P39929 tP(UGG)O1tP(UGG)O1 72 nt17.51■□□□□ 0.39
SNF7P39929 SUF11tP(UGG)O2 72 nt17.51■□□□□ 0.39
SNF7P39929 CCC1YLR220W 969 nt17.38■□□□□ 0.37
SNF7P39929 YOL085CYOL085C 342 nt17.37■□□□□ 0.37
SNF7P39929 PUT4YOR348C 1884 nt17.24■□□□□ 0.35
SNF7P39929 PKP1YIL042C 1185 nt17.18■□□□□ 0.34
SNF7P39929 RVS167YDR388W 1449 nt17.13■□□□□ 0.33
SNF7P39929 RPP1BYDL130W 321 nt17.12■□□□□ 0.33
SNF7P39929 SCJ1YMR214W 1134 nt17■□□□□ 0.31
SNF7P39929 ARE1YCR048W 1833 nt16.7■□□□□ 0.26
SNF7P39929 POA1YBR022W 534 nt16.64■□□□□ 0.25
SNF7P39929 YHR049C-AYHR049C-A 297 nt16.5■□□□□ 0.23
SNF7P39929 SAH1YER043C 1350 nt16.48■□□□□ 0.23
SNF7P39929 BSC6YOL137W 1494 nt16.43■□□□□ 0.22
SNF7P39929 URN1YPR152C 1398 nt16.43■□□□□ 0.22
SNF7P39929 SHR5YOL110W 714 nt16.37■□□□□ 0.21
SNF7P39929 PET122YER153C 765 nt16.34■□□□□ 0.21
SNF7P39929 OPI9YLR338W 858 nt16.33■□□□□ 0.2
SNF7P39929 tP(UGG)O3tP(UGG)O3 72 nt16.31■□□□□ 0.2
SNF7P39929 ATS1YAL020C 1002 nt16.31■□□□□ 0.2
SNF7P39929 SCR1SCR1 522 nt16.3■□□□□ 0.2
SNF7P39929 DEP1YAL013W 1218 nt16.26■□□□□ 0.19
SNF7P39929 SPT5YML010W 3192 nt16.25■□□□□ 0.19
SNF7P39929 BUD23YCR047C 828 nt16.06■□□□□ 0.16
SNF7P39929 SSA4YER103W 1929 nt16.06■□□□□ 0.16
SNF7P39929 RPN10YHR200W 807 nt15.92■□□□□ 0.14
SNF7P39929 RRN5YLR141W 1092 nt15.89■□□□□ 0.13
SNF7P39929 PTC2YER089C 1395 nt15.82■□□□□ 0.12
SNF7P39929 PUN1YLR414C 792 nt15.81■□□□□ 0.12
SNF7P39929 YNL208WYNL208W 600 nt15.81■□□□□ 0.12
SNF7P39929 YDJ1YNL064C 1230 nt15.73■□□□□ 0.11
SNF7P39929 NAB2YGL122C 1578 nt15.67■□□□□ 0.1
SNF7P39929 RSB1YOR049C 1065 nt15.64■□□□□ 0.09
SNF7P39929 YJR018WYJR018W 363 nt15.61■□□□□ 0.09
SNF7P39929 GAR1YHR089C 618 nt15.59■□□□□ 0.09
SNF7P39929 YER088W-BYER088W-B 147 nt15.54■□□□□ 0.08
SNF7P39929 BDF1YLR399C 2061 nt15.52■□□□□ 0.08
SNF7P39929 MEP2YNL142W 1500 nt15.48■□□□□ 0.07
SNF7P39929 FIS1YIL065C 468 nt15.44■□□□□ 0.06
SNF7P39929 DAL1YIR027C 1383 nt15.34■□□□□ 0.05
SNF7P39929 FPR4YLR449W 1179 nt15.33■□□□□ 0.04
SNF7P39929 DCW1YKL046C 1350 nt15.29■□□□□ 0.04
SNF7P39929 TAT1YBR069C 1860 nt15.28■□□□□ 0.04
SNF7P39929 YJR120WYJR120W 351 nt15.27■□□□□ 0.04
SNF7P39929 PHO4YFR034C 939 nt15.22■□□□□ 0.03
SNF7P39929 YPS1YLR120C 1710 nt15.2■□□□□ 0.02
SNF7P39929 SSA1YAL005C 1929 nt15.1■□□□□ 0.01
SNF7P39929 INM2YDR287W 879 nt15.09■□□□□ 0.01
SNF7P39929 TIR1YER011W 765 nt15.08■□□□□ 0
SNF7P39929 YHR165W-AYHR165W-A 312 nt15.08■□□□□ 0
SNF7P39929 PST2YDR032C 597 nt15.05■□□□□ -0
SNF7P39929 RPP2BYDR382W 333 nt15.04■□□□□ -0
SNF7P39929 EMI2YDR516C 1503 nt15.02□□□□□ -0.01
SNF7P39929 YBR220CYBR220C 1683 nt15□□□□□ -0.01
SNF7P39929 YDR095CYDR095C 411 nt14.96□□□□□ -0.01
SNF7P39929 YMR090WYMR090W 684 nt14.89□□□□□ -0.03
SNF7P39929 YBL100CYBL100C 315 nt14.89□□□□□ -0.03
SNF7P39929 PAC11YDR488C 1602 nt14.88□□□□□ -0.03
SNF7P39929 YDL221WYDL221W 552 nt14.82□□□□□ -0.04
SNF7P39929 CAC2YML102W 1407 nt14.8□□□□□ -0.04
SNF7P39929 SDH1YKL148C 1923 nt14.8□□□□□ -0.04
SNF7P39929 SRB2YHR041C 633 nt14.77□□□□□ -0.05
SNF7P39929 PTP1YDL230W 1008 nt14.74□□□□□ -0.05
SNF7P39929 FUN26YAL022C 1554 nt14.68□□□□□ -0.06
SNF7P39929 RPP2AYOL039W 321 nt14.67□□□□□ -0.06
SNF7P39929 BDH2YAL061W 1254 nt14.63□□□□□ -0.07
SNF7P39929 ALF1YNL148C 765 nt14.61□□□□□ -0.07
SNF7P39929 PCH2YBR186W 1695 nt14.61□□□□□ -0.07
SNF7P39929 SCC4YER147C 1875 nt14.6□□□□□ -0.07
SNF7P39929 YKL097CYKL097C 411 nt14.57□□□□□ -0.08
SNF7P39929 GUT2YIL155C 1950 nt14.56□□□□□ -0.08
SNF7P39929 IRC15YPL017C 1500 nt14.56□□□□□ -0.08
SNF7P39929 Q0182Q0182 405 nt14.55□□□□□ -0.08
SNF7P39929 SEC11YIR022W 504 nt14.49□□□□□ -0.09
SNF7P39929 TRM9YML014W 840 nt14.48□□□□□ -0.09
SNF7P39929 GIS3YLR094C 1509 nt14.47□□□□□ -0.09
SNF7P39929 SHU1YHL006C 453 nt14.47□□□□□ -0.09
SNF7P39929 SIS1YNL007C 1059 nt14.41□□□□□ -0.1
SNF7P39929 CCT6YDR188W 1641 nt14.38□□□□□ -0.11
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms