Protein–RNA interactions for Protein: P38798

NMD2, Nonsense-mediated mRNA decay protein 2, yeastyeast

Known RBP Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD2P38798 YML009W-BYML009W-B 477 nt24.75■■□□□ 1.55
NMD2P38798 NSR1YGR159C 1245 nt24.66■■□□□ 1.54
NMD2P38798 NOP1YDL014W 984 nt23.99■■□□□ 1.43
NMD2P38798 YKL036CYKL036C 393 nt22.08■■□□□ 1.13
NMD2P38798 MDJ1YFL016C 1536 nt22.01■■□□□ 1.11
NMD2P38798 Q0297Q0297 156 nt21.01■□□□□ 0.95
NMD2P38798 SRX1YKL086W 384 nt20.99■□□□□ 0.95
NMD2P38798 YJL027CYJL027C 417 nt20.59■□□□□ 0.89
NMD2P38798 SCS3YGL126W 1143 nt20.08■□□□□ 0.81
NMD2P38798 YCR051WYCR051W 669 nt19.89■□□□□ 0.77
NMD2P38798 DBP2YNL112W 1641 nt19.47■□□□□ 0.71
NMD2P38798 YOL085CYOL085C 342 nt19.14■□□□□ 0.65
NMD2P38798 TRN1tP(UGG)A 72 nt19.06■□□□□ 0.64
NMD2P38798 SUF9tP(UGG)F 72 nt19.06■□□□□ 0.64
NMD2P38798 SUF8tP(UGG)H 72 nt19.06■□□□□ 0.64
NMD2P38798 tP(UGG)LtP(UGG)L 72 nt19.06■□□□□ 0.64
NMD2P38798 SUF7tP(UGG)M 72 nt19.06■□□□□ 0.64
NMD2P38798 tP(UGG)N1tP(UGG)N1 72 nt19.06■□□□□ 0.64
NMD2P38798 tP(UGG)N2tP(UGG)N2 72 nt19.06■□□□□ 0.64
NMD2P38798 tP(UGG)O1tP(UGG)O1 72 nt19.06■□□□□ 0.64
NMD2P38798 SUF11tP(UGG)O2 72 nt19.06■□□□□ 0.64
NMD2P38798 PKP1YIL042C 1185 nt18.86■□□□□ 0.61
NMD2P38798 RPP1BYDL130W 321 nt18.85■□□□□ 0.61
NMD2P38798 CCC1YLR220W 969 nt18.82■□□□□ 0.6
NMD2P38798 YBR190WYBR190W 312 nt18.76■□□□□ 0.59
NMD2P38798 RTC3YHR087W 336 nt18.32■□□□□ 0.52
NMD2P38798 RVS167YDR388W 1449 nt18.22■□□□□ 0.51
NMD2P38798 SCJ1YMR214W 1134 nt18.19■□□□□ 0.5
NMD2P38798 PET122YER153C 765 nt18.04■□□□□ 0.48
NMD2P38798 tP(UGG)O3tP(UGG)O3 72 nt17.98■□□□□ 0.47
NMD2P38798 ATS1YAL020C 1002 nt17.91■□□□□ 0.46
NMD2P38798 SCR1SCR1 522 nt17.77■□□□□ 0.44
NMD2P38798 SHR5YOL110W 714 nt17.59■□□□□ 0.41
NMD2P38798 RRN5YLR141W 1092 nt17.48■□□□□ 0.39
NMD2P38798 YDJ1YNL064C 1230 nt17.39■□□□□ 0.37
NMD2P38798 YER088W-BYER088W-B 147 nt17.16■□□□□ 0.34
NMD2P38798 URN1YPR152C 1398 nt17.15■□□□□ 0.34
NMD2P38798 PUT4YOR348C 1884 nt17.14■□□□□ 0.33
NMD2P38798 DEP1YAL013W 1218 nt17.11■□□□□ 0.33
NMD2P38798 RSB1YOR049C 1065 nt17.09■□□□□ 0.33
NMD2P38798 SSA3YBL075C 1950 nt17.08■□□□□ 0.33
NMD2P38798 GAR1YHR089C 618 nt17.01■□□□□ 0.31
NMD2P38798 OPI9YLR338W 858 nt16.91■□□□□ 0.3
NMD2P38798 RPN10YHR200W 807 nt16.84■□□□□ 0.29
NMD2P38798 SAH1YER043C 1350 nt16.84■□□□□ 0.29
NMD2P38798 YNL208WYNL208W 600 nt16.83■□□□□ 0.28
NMD2P38798 ARE1YCR048W 1833 nt16.81■□□□□ 0.28
NMD2P38798 PST2YDR032C 597 nt16.61■□□□□ 0.25
NMD2P38798 YHR049C-AYHR049C-A 297 nt16.58■□□□□ 0.24
NMD2P38798 POA1YBR022W 534 nt16.57■□□□□ 0.24
NMD2P38798 TIR1YER011W 765 nt16.45■□□□□ 0.22
NMD2P38798 PUN1YLR414C 792 nt16.41■□□□□ 0.22
NMD2P38798 YJR018WYJR018W 363 nt16.34■□□□□ 0.21
NMD2P38798 SSA1YAL005C 1929 nt16.29■□□□□ 0.2
NMD2P38798 BSC6YOL137W 1494 nt16.24■□□□□ 0.19
NMD2P38798 PTC2YER089C 1395 nt16.24■□□□□ 0.19
NMD2P38798 BUD23YCR047C 828 nt16.15■□□□□ 0.18
NMD2P38798 YJR120WYJR120W 351 nt16.14■□□□□ 0.17
NMD2P38798 Q0182Q0182 405 nt16.07■□□□□ 0.16
NMD2P38798 SRB2YHR041C 633 nt16.05■□□□□ 0.16
NMD2P38798 NAB2YGL122C 1578 nt16.02■□□□□ 0.16
NMD2P38798 RPP2BYDR382W 333 nt15.97■□□□□ 0.15
NMD2P38798 SHU1YHL006C 453 nt15.97■□□□□ 0.15
NMD2P38798 YKL097CYKL097C 411 nt15.89■□□□□ 0.13
NMD2P38798 FIS1YIL065C 468 nt15.86■□□□□ 0.13
NMD2P38798 DAL1YIR027C 1383 nt15.81■□□□□ 0.12
NMD2P38798 INM2YDR287W 879 nt15.75■□□□□ 0.11
NMD2P38798 FPR4YLR449W 1179 nt15.75■□□□□ 0.11
NMD2P38798 YAL037C-BYAL037C-B 975 nt15.73■□□□□ 0.11
NMD2P38798 WWM1YFL010C 636 nt15.72■□□□□ 0.11
NMD2P38798 PHO4YFR034C 939 nt15.68■□□□□ 0.1
NMD2P38798 BDH2YAL061W 1254 nt15.67■□□□□ 0.1
NMD2P38798 YBL100CYBL100C 315 nt15.62■□□□□ 0.09
NMD2P38798 YGR021WYGR021W 873 nt15.6■□□□□ 0.09
NMD2P38798 SPT5YML010W 3192 nt15.58■□□□□ 0.08
NMD2P38798 HOM6YJR139C 1080 nt15.56■□□□□ 0.08
NMD2P38798 MNP1YGL068W 585 nt15.48■□□□□ 0.07
NMD2P38798 YFL021C-AYFL021C-A 855 nt15.46■□□□□ 0.07
NMD2P38798 FUN26YAL022C 1554 nt15.44■□□□□ 0.06
NMD2P38798 LSM3YLR438C-A 270 nt15.43■□□□□ 0.06
NMD2P38798 YPS1YLR120C 1710 nt15.4■□□□□ 0.06
NMD2P38798 MOT3YMR070W 1473 nt15.37■□□□□ 0.05
NMD2P38798 TRM9YML014W 840 nt15.35■□□□□ 0.05
NMD2P38798 RKM5YLR137W 1104 nt15.33■□□□□ 0.04
NMD2P38798 YOR139CYOR139C 393 nt15.31■□□□□ 0.04
NMD2P38798 YDR095CYDR095C 411 nt15.3■□□□□ 0.04
NMD2P38798 MEP2YNL142W 1500 nt15.25■□□□□ 0.03
NMD2P38798 CCT6YDR188W 1641 nt15.25■□□□□ 0.03
NMD2P38798 YHR165W-AYHR165W-A 312 nt15.21■□□□□ 0.03
NMD2P38798 ALF1YNL148C 765 nt15.2■□□□□ 0.02
NMD2P38798 YOL037CYOL037C 354 nt15.17■□□□□ 0.02
NMD2P38798 NPL3YDR432W 1245 nt15.16■□□□□ 0.02
NMD2P38798 SUF2tP(AGG)C 72 nt15.09■□□□□ 0.01
NMD2P38798 SUF10tP(AGG)N 72 nt15.09■□□□□ 0.01
NMD2P38798 DCW1YKL046C 1350 nt15.03■□□□□ -0
NMD2P38798 SIS1YNL007C 1059 nt15.01□□□□□ -0.01
NMD2P38798 SSA4YER103W 1929 nt15□□□□□ -0.01
NMD2P38798 RPP2AYOL039W 321 nt14.99□□□□□ -0.01
NMD2P38798 PTP1YDL230W 1008 nt14.98□□□□□ -0.01
NMD2P38798 CAC2YML102W 1407 nt14.85□□□□□ -0.03
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms