Protein–RNA interactions for Protein: P38904

SPP41, Protein SPP41, yeastyeast

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPP41P38904 YML009W-BYML009W-B 477 nt32.66■■■□□ 2.82
SPP41P38904 NOP1YDL014W 984 nt31.69■■■□□ 2.66
SPP41P38904 NSR1YGR159C 1245 nt31.42■■■□□ 2.62
SPP41P38904 YKL036CYKL036C 393 nt30.06■■■□□ 2.4
SPP41P38904 YJL027CYJL027C 417 nt28.26■■■□□ 2.12
SPP41P38904 Q0297Q0297 156 nt28.02■■■□□ 2.08
SPP41P38904 SCS3YGL126W 1143 nt27.89■■■□□ 2.06
SPP41P38904 SRX1YKL086W 384 nt27.8■■■□□ 2.04
SPP41P38904 MDJ1YFL016C 1536 nt27.64■■■□□ 2.02
SPP41P38904 YCR051WYCR051W 669 nt26.56■■□□□ 1.84
SPP41P38904 YOL085CYOL085C 342 nt25.99■■□□□ 1.75
SPP41P38904 PKP1YIL042C 1185 nt25.75■■□□□ 1.71
SPP41P38904 SCJ1YMR214W 1134 nt25.28■■□□□ 1.64
SPP41P38904 RPP1BYDL130W 321 nt25.19■■□□□ 1.62
SPP41P38904 ATS1YAL020C 1002 nt24.99■■□□□ 1.59
SPP41P38904 TRN1tP(UGG)A 72 nt24.81■■□□□ 1.56
SPP41P38904 SUF9tP(UGG)F 72 nt24.81■■□□□ 1.56
SPP41P38904 SUF8tP(UGG)H 72 nt24.81■■□□□ 1.56
SPP41P38904 tP(UGG)LtP(UGG)L 72 nt24.81■■□□□ 1.56
SPP41P38904 SUF7tP(UGG)M 72 nt24.81■■□□□ 1.56
SPP41P38904 tP(UGG)N1tP(UGG)N1 72 nt24.81■■□□□ 1.56
SPP41P38904 tP(UGG)N2tP(UGG)N2 72 nt24.81■■□□□ 1.56
SPP41P38904 tP(UGG)O1tP(UGG)O1 72 nt24.81■■□□□ 1.56
SPP41P38904 SUF11tP(UGG)O2 72 nt24.81■■□□□ 1.56
SPP41P38904 CCC1YLR220W 969 nt24.62■■□□□ 1.53
SPP41P38904 DBP2YNL112W 1641 nt24.61■■□□□ 1.53
SPP41P38904 PET122YER153C 765 nt24.17■■□□□ 1.46
SPP41P38904 SCR1SCR1 522 nt23.93■■□□□ 1.42
SPP41P38904 tP(UGG)O3tP(UGG)O3 72 nt23.66■■□□□ 1.38
SPP41P38904 RRN5YLR141W 1092 nt23.4■■□□□ 1.34
SPP41P38904 RTC3YHR087W 336 nt23.28■■□□□ 1.32
SPP41P38904 RSB1YOR049C 1065 nt23.26■■□□□ 1.31
SPP41P38904 RVS167YDR388W 1449 nt23.2■■□□□ 1.3
SPP41P38904 YBR190WYBR190W 312 nt23.05■■□□□ 1.28
SPP41P38904 YER088W-BYER088W-B 147 nt22.98■■□□□ 1.27
SPP41P38904 PST2YDR032C 597 nt22.97■■□□□ 1.27
SPP41P38904 YDJ1YNL064C 1230 nt22.74■■□□□ 1.23
SPP41P38904 SHR5YOL110W 714 nt22.6■■□□□ 1.21
SPP41P38904 YKL097CYKL097C 411 nt22.58■■□□□ 1.21
SPP41P38904 GAR1YHR089C 618 nt22.32■■□□□ 1.16
SPP41P38904 SHU1YHL006C 453 nt22.04■■□□□ 1.12
SPP41P38904 DEP1YAL013W 1218 nt21.92■■□□□ 1.1
SPP41P38904 URN1YPR152C 1398 nt21.6■■□□□ 1.05
SPP41P38904 YOR139CYOR139C 393 nt21.59■■□□□ 1.05
SPP41P38904 YAL037C-BYAL037C-B 975 nt21.56■■□□□ 1.04
SPP41P38904 TIR1YER011W 765 nt21.48■■□□□ 1.03
SPP41P38904 YNL208WYNL208W 600 nt21.4■■□□□ 1.02
SPP41P38904 RPN10YHR200W 807 nt21.3■■□□□ 1
SPP41P38904 NPL3YDR432W 1245 nt21.21■□□□□ 0.99
SPP41P38904 SSA1YAL005C 1929 nt21.13■□□□□ 0.97
SPP41P38904 SRB2YHR041C 633 nt21.11■□□□□ 0.97
SPP41P38904 MNP1YGL068W 585 nt21.02■□□□□ 0.96
SPP41P38904 OPI9YLR338W 858 nt21.01■□□□□ 0.95
SPP41P38904 SAH1YER043C 1350 nt20.82■□□□□ 0.92
SPP41P38904 WWM1YFL010C 636 nt20.76■□□□□ 0.91
SPP41P38904 HOM6YJR139C 1080 nt20.76■□□□□ 0.91
SPP41P38904 YGR021WYGR021W 873 nt20.71■□□□□ 0.91
SPP41P38904 YOL037CYOL037C 354 nt20.7■□□□□ 0.9
SPP41P38904 YJR120WYJR120W 351 nt20.59■□□□□ 0.89
SPP41P38904 YJR018WYJR018W 363 nt20.57■□□□□ 0.88
SPP41P38904 tM(CAU)CtM(CAU)C 72 nt20.55■□□□□ 0.88
SPP41P38904 IMT4tM(CAU)E 72 nt20.55■□□□□ 0.88
SPP41P38904 IMT3tM(CAU)J3 72 nt20.55■□□□□ 0.88
SPP41P38904 IMT1tM(CAU)O1 72 nt20.55■□□□□ 0.88
SPP41P38904 IMT2tM(CAU)P 72 nt20.55■□□□□ 0.88
SPP41P38904 RKM5YLR137W 1104 nt20.46■□□□□ 0.87
SPP41P38904 PUT4YOR348C 1884 nt20.46■□□□□ 0.87
SPP41P38904 PUN1YLR414C 792 nt20.38■□□□□ 0.85
SPP41P38904 ARE1YCR048W 1833 nt20.38■□□□□ 0.85
SPP41P38904 RPP2BYDR382W 333 nt20.31■□□□□ 0.84
SPP41P38904 YFL021C-AYFL021C-A 855 nt20.27■□□□□ 0.84
SPP41P38904 YHR049C-AYHR049C-A 297 nt20.26■□□□□ 0.83
SPP41P38904 PUS2YGL063W 1113 nt20.22■□□□□ 0.83
SPP41P38904 MOT3YMR070W 1473 nt20.18■□□□□ 0.82
SPP41P38904 SSA3YBL075C 1950 nt20.17■□□□□ 0.82
SPP41P38904 YLR281CYLR281C 468 nt20.1■□□□□ 0.81
SPP41P38904 PTC2YER089C 1395 nt20.09■□□□□ 0.81
SPP41P38904 BDH2YAL061W 1254 nt20.05■□□□□ 0.8
SPP41P38904 WHI5YOR083W 888 nt19.98■□□□□ 0.79
SPP41P38904 POA1YBR022W 534 nt19.93■□□□□ 0.78
SPP41P38904 BSC6YOL137W 1494 nt19.88■□□□□ 0.77
SPP41P38904 FMP45YDL222C 930 nt19.84■□□□□ 0.77
SPP41P38904 BUD23YCR047C 828 nt19.82■□□□□ 0.76
SPP41P38904 YLR236CYLR236C 324 nt19.8■□□□□ 0.76
SPP41P38904 LSM3YLR438C-A 270 nt19.76■□□□□ 0.75
SPP41P38904 YBL100CYBL100C 315 nt19.76■□□□□ 0.75
SPP41P38904 YPR011CYPR011C 981 nt19.73■□□□□ 0.75
SPP41P38904 FIS1YIL065C 468 nt19.69■□□□□ 0.74
SPP41P38904 FPR4YLR449W 1179 nt19.69■□□□□ 0.74
SPP41P38904 DSK2YMR276W 1122 nt19.68■□□□□ 0.74
SPP41P38904 NAB2YGL122C 1578 nt19.63■□□□□ 0.73
SPP41P38904 DAL1YIR027C 1383 nt19.57■□□□□ 0.72
SPP41P38904 INM2YDR287W 879 nt19.56■□□□□ 0.72
SPP41P38904 PHO4YFR034C 939 nt19.51■□□□□ 0.71
SPP41P38904 YCH1YGR203W 447 nt19.51■□□□□ 0.71
SPP41P38904 FUN26YAL022C 1554 nt19.48■□□□□ 0.71
SPP41P38904 YLR154C-GYLR154C-G 150 nt19.47■□□□□ 0.71
SPP41P38904 TRM9YML014W 840 nt19.46■□□□□ 0.71
SPP41P38904 MRPL8YJL063C 717 nt19.42■□□□□ 0.7
SPP41P38904 LPX1YOR084W 1164 nt19.37■□□□□ 0.69
Retrieved 100 of 7,029 protein–RNA pairs in 8.1 ms