Protein–RNA interactions for Protein: Q99271

NHA1, Na(+)/H(+) antiporter, yeastyeast

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHA1Q99271 YML009W-BYML009W-B 477 nt20.09■□□□□ 0.81
NHA1Q99271 NSR1YGR159C 1245 nt19.78■□□□□ 0.76
NHA1Q99271 NOP1YDL014W 984 nt19.67■□□□□ 0.74
NHA1Q99271 YKL036CYKL036C 393 nt18.17■□□□□ 0.5
NHA1Q99271 MDJ1YFL016C 1536 nt17.78■□□□□ 0.44
NHA1Q99271 Q0297Q0297 156 nt17.06■□□□□ 0.32
NHA1Q99271 YJL027CYJL027C 417 nt17.05■□□□□ 0.32
NHA1Q99271 SRX1YKL086W 384 nt17.03■□□□□ 0.32
NHA1Q99271 SCS3YGL126W 1143 nt16.5■□□□□ 0.23
NHA1Q99271 YCR051WYCR051W 669 nt16.32■□□□□ 0.2
NHA1Q99271 YOL085CYOL085C 342 nt15.65■□□□□ 0.1
NHA1Q99271 SSA3YBL075C 1950 nt15.54■□□□□ 0.08
NHA1Q99271 DBP2YNL112W 1641 nt15.53■□□□□ 0.08
NHA1Q99271 PKP1YIL042C 1185 nt15.46■□□□□ 0.07
NHA1Q99271 RPP1BYDL130W 321 nt15.36■□□□□ 0.05
NHA1Q99271 CCC1YLR220W 969 nt15.3■□□□□ 0.04
NHA1Q99271 YBR190WYBR190W 312 nt15.3■□□□□ 0.04
NHA1Q99271 TRN1tP(UGG)A 72 nt15.24■□□□□ 0.03
NHA1Q99271 SUF9tP(UGG)F 72 nt15.24■□□□□ 0.03
NHA1Q99271 SUF8tP(UGG)H 72 nt15.24■□□□□ 0.03
NHA1Q99271 tP(UGG)LtP(UGG)L 72 nt15.24■□□□□ 0.03
NHA1Q99271 SUF7tP(UGG)M 72 nt15.24■□□□□ 0.03
NHA1Q99271 tP(UGG)N1tP(UGG)N1 72 nt15.24■□□□□ 0.03
NHA1Q99271 tP(UGG)N2tP(UGG)N2 72 nt15.24■□□□□ 0.03
NHA1Q99271 tP(UGG)O1tP(UGG)O1 72 nt15.24■□□□□ 0.03
NHA1Q99271 SUF11tP(UGG)O2 72 nt15.24■□□□□ 0.03
NHA1Q99271 RTC3YHR087W 336 nt14.95□□□□□ -0.02
NHA1Q99271 SCJ1YMR214W 1134 nt14.83□□□□□ -0.04
NHA1Q99271 ATS1YAL020C 1002 nt14.82□□□□□ -0.04
NHA1Q99271 RVS167YDR388W 1449 nt14.76□□□□□ -0.05
NHA1Q99271 SCR1SCR1 522 nt14.71□□□□□ -0.05
NHA1Q99271 PET122YER153C 765 nt14.61□□□□□ -0.07
NHA1Q99271 tP(UGG)O3tP(UGG)O3 72 nt14.53□□□□□ -0.08
NHA1Q99271 SSA1YAL005C 1929 nt14.31□□□□□ -0.12
NHA1Q99271 RRN5YLR141W 1092 nt14.25□□□□□ -0.13
NHA1Q99271 PUT4YOR348C 1884 nt14.19□□□□□ -0.14
NHA1Q99271 SHR5YOL110W 714 nt14.12□□□□□ -0.15
NHA1Q99271 RSB1YOR049C 1065 nt14.11□□□□□ -0.15
NHA1Q99271 FPS1YLL043W 2010 nt14.06□□□□□ -0.16
NHA1Q99271 YDJ1YNL064C 1230 nt14.05□□□□□ -0.16
NHA1Q99271 YER088W-BYER088W-B 147 nt13.93□□□□□ -0.18
NHA1Q99271 URN1YPR152C 1398 nt13.82□□□□□ -0.2
NHA1Q99271 GAR1YHR089C 618 nt13.8□□□□□ -0.2
NHA1Q99271 ARE1YCR048W 1833 nt13.8□□□□□ -0.2
NHA1Q99271 NVJ2YPR091C 2313 nt13.76□□□□□ -0.21
NHA1Q99271 POA1YBR022W 534 nt13.73□□□□□ -0.21
NHA1Q99271 SAH1YER043C 1350 nt13.72□□□□□ -0.21
NHA1Q99271 DEP1YAL013W 1218 nt13.72□□□□□ -0.21
NHA1Q99271 OPI9YLR338W 858 nt13.71□□□□□ -0.21
NHA1Q99271 YHR049C-AYHR049C-A 297 nt13.65□□□□□ -0.22
NHA1Q99271 RPN10YHR200W 807 nt13.64□□□□□ -0.23
NHA1Q99271 PST2YDR032C 597 nt13.63□□□□□ -0.23
NHA1Q99271 PAC11YDR488C 1602 nt13.54□□□□□ -0.24
NHA1Q99271 YNL208WYNL208W 600 nt13.53□□□□□ -0.24
NHA1Q99271 BSC6YOL137W 1494 nt13.52□□□□□ -0.25
NHA1Q99271 Q0182Q0182 405 nt13.35□□□□□ -0.27
NHA1Q99271 YKL097CYKL097C 411 nt13.33□□□□□ -0.28
NHA1Q99271 BUD23YCR047C 828 nt13.32□□□□□ -0.28
NHA1Q99271 PUN1YLR414C 792 nt13.32□□□□□ -0.28
NHA1Q99271 TIR1YER011W 765 nt13.28□□□□□ -0.28
NHA1Q99271 PTC2YER089C 1395 nt13.21□□□□□ -0.29
NHA1Q99271 YJR018WYJR018W 363 nt13.15□□□□□ -0.3
NHA1Q99271 SPT5YML010W 3192 nt13.14□□□□□ -0.31
NHA1Q99271 NAB2YGL122C 1578 nt13.11□□□□□ -0.31
NHA1Q99271 SHU1YHL006C 453 nt13.06□□□□□ -0.32
NHA1Q99271 RPP2BYDR382W 333 nt12.98□□□□□ -0.33
NHA1Q99271 SSA4YER103W 1929 nt12.93□□□□□ -0.34
NHA1Q99271 YAL037C-BYAL037C-B 975 nt12.89□□□□□ -0.35
NHA1Q99271 DAL1YIR027C 1383 nt12.86□□□□□ -0.35
NHA1Q99271 FIS1YIL065C 468 nt12.86□□□□□ -0.35
NHA1Q99271 FPR4YLR449W 1179 nt12.83□□□□□ -0.36
NHA1Q99271 YJR120WYJR120W 351 nt12.82□□□□□ -0.36
NHA1Q99271 INM2YDR287W 879 nt12.76□□□□□ -0.37
NHA1Q99271 YGR021WYGR021W 873 nt12.76□□□□□ -0.37
NHA1Q99271 MEP2YNL142W 1500 nt12.73□□□□□ -0.37
NHA1Q99271 PHO4YFR034C 939 nt12.73□□□□□ -0.37
NHA1Q99271 NPL3YDR432W 1245 nt12.7□□□□□ -0.38
NHA1Q99271 WWM1YFL010C 636 nt12.68□□□□□ -0.38
NHA1Q99271 YPS1YLR120C 1710 nt12.62□□□□□ -0.39
NHA1Q99271 SRB2YHR041C 633 nt12.61□□□□□ -0.39
NHA1Q99271 UME6YDR207C 2511 nt12.6□□□□□ -0.39
NHA1Q99271 RPM1RPM1 483 nt12.58□□□□□ -0.4
NHA1Q99271 HOM6YJR139C 1080 nt12.57□□□□□ -0.4
NHA1Q99271 BDH2YAL061W 1254 nt12.57□□□□□ -0.4
NHA1Q99271 YBL100CYBL100C 315 nt12.56□□□□□ -0.4
NHA1Q99271 MNP1YGL068W 585 nt12.55□□□□□ -0.4
NHA1Q99271 YOR139CYOR139C 393 nt12.55□□□□□ -0.4
NHA1Q99271 YHR165W-AYHR165W-A 312 nt12.54□□□□□ -0.4
NHA1Q99271 YFL021C-AYFL021C-A 855 nt12.52□□□□□ -0.41
NHA1Q99271 DCW1YKL046C 1350 nt12.51□□□□□ -0.41
NHA1Q99271 YDR095CYDR095C 411 nt12.48□□□□□ -0.41
NHA1Q99271 YOL037CYOL037C 354 nt12.48□□□□□ -0.41
NHA1Q99271 LSM3YLR438C-A 270 nt12.45□□□□□ -0.42
NHA1Q99271 BDF1YLR399C 2061 nt12.44□□□□□ -0.42
NHA1Q99271 RKM5YLR137W 1104 nt12.43□□□□□ -0.42
NHA1Q99271 TRM9YML014W 840 nt12.43□□□□□ -0.42
NHA1Q99271 FUN26YAL022C 1554 nt12.39□□□□□ -0.43
NHA1Q99271 EMI2YDR516C 1503 nt12.36□□□□□ -0.43
NHA1Q99271 YMR090WYMR090W 684 nt12.35□□□□□ -0.43
NHA1Q99271 ALF1YNL148C 765 nt12.33□□□□□ -0.44
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms