Protein–RNA interactions for Protein: P53289

RTS3, Protein phosphatase type 2A regulatory subunit RTS3, yeastyeast

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTS3P53289 YML009W-BYML009W-B 477 nt19.71■□□□□ 0.75
RTS3P53289 NSR1YGR159C 1245 nt19.44■□□□□ 0.7
RTS3P53289 NOP1YDL014W 984 nt19.31■□□□□ 0.68
RTS3P53289 YKL036CYKL036C 393 nt17.99■□□□□ 0.47
RTS3P53289 MDJ1YFL016C 1536 nt17.3■□□□□ 0.36
RTS3P53289 YJL027CYJL027C 417 nt16.89■□□□□ 0.29
RTS3P53289 Q0297Q0297 156 nt16.84■□□□□ 0.29
RTS3P53289 SRX1YKL086W 384 nt16.77■□□□□ 0.28
RTS3P53289 SCS3YGL126W 1143 nt16.43■□□□□ 0.22
RTS3P53289 YCR051WYCR051W 669 nt16.04■□□□□ 0.16
RTS3P53289 Q0182Q0182 405 nt16.01■□□□□ 0.15
RTS3P53289 YOL085CYOL085C 342 nt15.51■□□□□ 0.07
RTS3P53289 DBP2YNL112W 1641 nt15.32■□□□□ 0.04
RTS3P53289 PKP1YIL042C 1185 nt15.3■□□□□ 0.04
RTS3P53289 RPP1BYDL130W 321 nt15.16■□□□□ 0.02
RTS3P53289 MOT3YMR070W 1473 nt15.14■□□□□ 0.01
RTS3P53289 CCC1YLR220W 969 nt14.97□□□□□ -0.01
RTS3P53289 TRN1tP(UGG)A 72 nt14.95□□□□□ -0.02
RTS3P53289 SUF9tP(UGG)F 72 nt14.95□□□□□ -0.02
RTS3P53289 SUF8tP(UGG)H 72 nt14.95□□□□□ -0.02
RTS3P53289 tP(UGG)LtP(UGG)L 72 nt14.95□□□□□ -0.02
RTS3P53289 SUF7tP(UGG)M 72 nt14.95□□□□□ -0.02
RTS3P53289 tP(UGG)N1tP(UGG)N1 72 nt14.95□□□□□ -0.02
RTS3P53289 tP(UGG)N2tP(UGG)N2 72 nt14.95□□□□□ -0.02
RTS3P53289 tP(UGG)O1tP(UGG)O1 72 nt14.95□□□□□ -0.02
RTS3P53289 SUF11tP(UGG)O2 72 nt14.95□□□□□ -0.02
RTS3P53289 SCJ1YMR214W 1134 nt14.89□□□□□ -0.03
RTS3P53289 YBR190WYBR190W 312 nt14.84□□□□□ -0.03
RTS3P53289 ATS1YAL020C 1002 nt14.78□□□□□ -0.04
RTS3P53289 SCR1SCR1 522 nt14.49□□□□□ -0.09
RTS3P53289 RTC3YHR087W 336 nt14.45□□□□□ -0.1
RTS3P53289 PET122YER153C 765 nt14.42□□□□□ -0.1
RTS3P53289 RVS167YDR388W 1449 nt14.34□□□□□ -0.11
RTS3P53289 SSA1YAL005C 1929 nt14.32□□□□□ -0.12
RTS3P53289 tP(UGG)O3tP(UGG)O3 72 nt14.28□□□□□ -0.12
RTS3P53289 RRN5YLR141W 1092 nt14.06□□□□□ -0.16
RTS3P53289 RSB1YOR049C 1065 nt13.93□□□□□ -0.18
RTS3P53289 SHR5YOL110W 714 nt13.82□□□□□ -0.2
RTS3P53289 YDJ1YNL064C 1230 nt13.8□□□□□ -0.2
RTS3P53289 YER088W-BYER088W-B 147 nt13.76□□□□□ -0.21
RTS3P53289 SSA3YBL075C 1950 nt13.71□□□□□ -0.22
RTS3P53289 PST2YDR032C 597 nt13.59□□□□□ -0.23
RTS3P53289 PUT4YOR348C 1884 nt13.57□□□□□ -0.24
RTS3P53289 GAR1YHR089C 618 nt13.53□□□□□ -0.24
RTS3P53289 URN1YPR152C 1398 nt13.49□□□□□ -0.25
RTS3P53289 FPS1YLL043W 2010 nt13.46□□□□□ -0.25
RTS3P53289 DEP1YAL013W 1218 nt13.44□□□□□ -0.26
RTS3P53289 OPI9YLR338W 858 nt13.36□□□□□ -0.27
RTS3P53289 YKL097CYKL097C 411 nt13.31□□□□□ -0.28
RTS3P53289 ARE1YCR048W 1833 nt13.28□□□□□ -0.28
RTS3P53289 SAH1YER043C 1350 nt13.28□□□□□ -0.28
RTS3P53289 RPN10YHR200W 807 nt13.25□□□□□ -0.29
RTS3P53289 YNL208WYNL208W 600 nt13.25□□□□□ -0.29
RTS3P53289 POA1YBR022W 534 nt13.12□□□□□ -0.31
RTS3P53289 YHR049C-AYHR049C-A 297 nt13.05□□□□□ -0.32
RTS3P53289 TIR1YER011W 765 nt13.02□□□□□ -0.33
RTS3P53289 SHU1YHL006C 453 nt12.99□□□□□ -0.33
RTS3P53289 PUN1YLR414C 792 nt12.94□□□□□ -0.34
RTS3P53289 RPM1RPM1 483 nt12.9□□□□□ -0.34
RTS3P53289 YJR018WYJR018W 363 nt12.88□□□□□ -0.35
RTS3P53289 BSC6YOL137W 1494 nt12.84□□□□□ -0.35
RTS3P53289 PTC2YER089C 1395 nt12.81□□□□□ -0.36
RTS3P53289 YAL037C-BYAL037C-B 975 nt12.78□□□□□ -0.36
RTS3P53289 BUD23YCR047C 828 nt12.73□□□□□ -0.37
RTS3P53289 NVJ2YPR091C 2313 nt12.68□□□□□ -0.38
RTS3P53289 YJR120WYJR120W 351 nt12.68□□□□□ -0.38
RTS3P53289 NAB2YGL122C 1578 nt12.67□□□□□ -0.38
RTS3P53289 NPL3YDR432W 1245 nt12.62□□□□□ -0.39
RTS3P53289 RPP2BYDR382W 333 nt12.6□□□□□ -0.39
RTS3P53289 YOR139CYOR139C 393 nt12.58□□□□□ -0.4
RTS3P53289 FRE6YLL051C 2139 nt12.57□□□□□ -0.4
RTS3P53289 SRB2YHR041C 633 nt12.56□□□□□ -0.4
RTS3P53289 YGR021WYGR021W 873 nt12.54□□□□□ -0.4
RTS3P53289 DAL1YIR027C 1383 nt12.47□□□□□ -0.41
RTS3P53289 INM2YDR287W 879 nt12.47□□□□□ -0.41
RTS3P53289 WWM1YFL010C 636 nt12.47□□□□□ -0.41
RTS3P53289 FIS1YIL065C 468 nt12.44□□□□□ -0.42
RTS3P53289 SPT5YML010W 3192 nt12.43□□□□□ -0.42
RTS3P53289 MNP1YGL068W 585 nt12.4□□□□□ -0.42
RTS3P53289 HOM6YJR139C 1080 nt12.4□□□□□ -0.42
RTS3P53289 FPR4YLR449W 1179 nt12.39□□□□□ -0.43
RTS3P53289 YOL037CYOL037C 354 nt12.35□□□□□ -0.43
RTS3P53289 PHO4YFR034C 939 nt12.33□□□□□ -0.44
RTS3P53289 BDH2YAL061W 1254 nt12.32□□□□□ -0.44
RTS3P53289 PAC11YDR488C 1602 nt12.31□□□□□ -0.44
RTS3P53289 YFL021C-AYFL021C-A 855 nt12.29□□□□□ -0.44
RTS3P53289 YBL100CYBL100C 315 nt12.28□□□□□ -0.44
RTS3P53289 RKM5YLR137W 1104 nt12.25□□□□□ -0.45
RTS3P53289 LSM3YLR438C-A 270 nt12.18□□□□□ -0.46
RTS3P53289 YPS1YLR120C 1710 nt12.17□□□□□ -0.46
RTS3P53289 FUN26YAL022C 1554 nt12.15□□□□□ -0.46
RTS3P53289 TRM9YML014W 840 nt12.12□□□□□ -0.47
RTS3P53289 tM(CAU)CtM(CAU)C 72 nt12.11□□□□□ -0.47
RTS3P53289 IMT4tM(CAU)E 72 nt12.11□□□□□ -0.47
RTS3P53289 IMT3tM(CAU)J3 72 nt12.11□□□□□ -0.47
RTS3P53289 IMT1tM(CAU)O1 72 nt12.11□□□□□ -0.47
RTS3P53289 IMT2tM(CAU)P 72 nt12.11□□□□□ -0.47
RTS3P53289 MEP2YNL142W 1500 nt12.09□□□□□ -0.47
RTS3P53289 YDR095CYDR095C 411 nt12.06□□□□□ -0.48
RTS3P53289 PUS2YGL063W 1113 nt12.05□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms