RNA–Protein interactions for RNA: YBL048W

RRT1, Transcript of Protein of unknown function, yeastyeast

Gene RRT1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRT1YBL048W TY1A-NL2Q12470 440 aa8.53□□□□□ -1.04
RRT1YBL048W TY1A-GR2Q12485 440 aa8.53□□□□□ -1.04
RRT1YBL048W ERG12P07277 443 aa8.51□□□□□ -1.05
RRT1YBL048W YPR109WQ06104 294 aa8.51□□□□□ -1.05
RRT1YBL048W GCD11P32481 527 aaKnown RBP8.5□□□□□ -1.05
RRT1YBL048W RGA1P39083 1007 aa8.49□□□□□ -1.05
RRT1YBL048W CKB1P43639 278 aa8.49□□□□□ -1.05
RRT1YBL048W CST6P40535 587 aa8.47□□□□□ -1.05
RRT1YBL048W SPT16P32558 1035 aaKnown RBP8.45□□□□□ -1.06
RRT1YBL048W PBS2P08018 668 aa8.44□□□□□ -1.06
RRT1YBL048W LAM6Q08001 693 aa8.44□□□□□ -1.06
RRT1YBL048W RGA2Q06407 1009 aa8.43□□□□□ -1.06
RRT1YBL048W PSE1P32337 1089 aaKnown RBP8.42□□□□□ -1.06
RRT1YBL048W AIR1P40507 360 aaKnown RBP8.39□□□□□ -1.07
RRT1YBL048W RRN7P40992 514 aa8.39□□□□□ -1.07
RRT1YBL048W CLA4P48562 842 aa8.39□□□□□ -1.07
RRT1YBL048W PAT1P25644 796 aaKnown RBP8.37□□□□□ -1.07
RRT1YBL048W ERF2Q06551 359 aa8.37□□□□□ -1.07
RRT1YBL048W KEX2P13134 814 aa8.36□□□□□ -1.07
RRT1YBL048W SAS10Q12136 610 aaPredicted RBP8.36□□□□□ -1.07
RRT1YBL048W BDP1P46678 594 aa8.35□□□□□ -1.07
RRT1YBL048W CLB5P30283 435 aa8.34□□□□□ -1.07
RRT1YBL048W BRE2P43132 505 aa8.34□□□□□ -1.07
RRT1YBL048W DSF2P38213 736 aa8.33□□□□□ -1.08
RRT1YBL048W FRK1Q03002 865 aaPredicted RBP8.33□□□□□ -1.08
RRT1YBL048W MAM3Q12296 706 aa8.33□□□□□ -1.08
RRT1YBL048W CDC4P07834 779 aa8.32□□□□□ -1.08
RRT1YBL048W GCR2Q01722 534 aa8.3□□□□□ -1.08
RRT1YBL048W HED1Q03937 162 aa8.3□□□□□ -1.08
RRT1YBL048W MOD5P07884 428 aa8.29□□□□□ -1.08
RRT1YBL048W AGE1Q04412 482 aa8.29□□□□□ -1.08
RRT1YBL048W RTF1P53064 558 aa8.28□□□□□ -1.08
RRT1YBL048W PAC1P39946 494 aaKnown RBP8.27□□□□□ -1.09
RRT1YBL048W SIT4P20604 311 aa8.26□□□□□ -1.09
RRT1YBL048W NUP42P49686 430 aaKnown RBP8.26□□□□□ -1.09
RRT1YBL048W IES2P40154 320 aa8.25□□□□□ -1.09
RRT1YBL048W TUB4P53378 473 aa8.25□□□□□ -1.09
RRT1YBL048W YPL062WQ02781 134 aa8.25□□□□□ -1.09
RRT1YBL048W DMA1P38823 416 aa8.24□□□□□ -1.09
RRT1YBL048W YNL115CP53925 644 aa8.24□□□□□ -1.09
RRT1YBL048W TEA1P47988 759 aa8.2□□□□□ -1.1
RRT1YBL048W DIT2P21595 489 aa8.17□□□□□ -1.1
RRT1YBL048W NIS1P53939 407 aa8.17□□□□□ -1.1
RRT1YBL048W MET32Q12041 191 aa8.17□□□□□ -1.1
RRT1YBL048W MET22P32179 357 aa8.16□□□□□ -1.1
RRT1YBL048W GAR1P28007 205 aaKnown RBP8.15□□□□□ -1.1
RRT1YBL048W TPD3P31383 635 aa8.15□□□□□ -1.1
RRT1YBL048W AFT1P22149 690 aa8.14□□□□□ -1.11
RRT1YBL048W SPB4P25808 606 aaPredicted RBP8.14□□□□□ -1.11
RRT1YBL048W ASH1P34233 588 aa8.14□□□□□ -1.11
RRT1YBL048W PUS5Q06244 254 aa8.14□□□□□ -1.11
RRT1YBL048W ENV9Q08651 330 aa8.14□□□□□ -1.11
RRT1YBL048W KXD1P53158 218 aa8.1□□□□□ -1.11
RRT1YBL048W FPK1P53739 893 aa8.1□□□□□ -1.11
RRT1YBL048W HXT10P43581 546 aa8.09□□□□□ -1.11
RRT1YBL048W GBP2P25555 427 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
RRT1YBL048W HST3P53687 447 aa8.08□□□□□ -1.12
RRT1YBL048W PDC1P06169 563 aaKnown RBP8.06□□□□□ -1.12
RRT1YBL048W SLY41P22215 453 aa8.06□□□□□ -1.12
RRT1YBL048W RRD1P40454 393 aaKnown RBP8.06□□□□□ -1.12
RRT1YBL048W YDR444WQ04093 687 aa8.06□□□□□ -1.12
RRT1YBL048W LCB5Q06147 687 aaKnown RBP8.03□□□□□ -1.12
RRT1YBL048W RPA14P50106 137 aa8.02□□□□□ -1.13
RRT1YBL048W PUS6P53294 404 aa8.02□□□□□ -1.13
RRT1YBL048W SYH1Q02875 849 aaKnown RBP8.02□□□□□ -1.13
RRT1YBL048W YMR196WQ04336 1088 aa8.02□□□□□ -1.13
RRT1YBL048W YJR115WP47152 169 aa8.01□□□□□ -1.13
RRT1YBL048W HST2P53686 357 aa8.01□□□□□ -1.13
RRT1YBL048W YPR097WQ06839 1073 aa8.01□□□□□ -1.13
RRT1YBL048W BUB1P41695 1021 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
RRT1YBL048W MSB3P48566 633 aaPredicted RBP8□□□□□ -1.13
RRT1YBL048W ALR1Q08269 859 aa7.99□□□□□ -1.13
RRT1YBL048W SCJ1P25303 377 aa7.98□□□□□ -1.13
RRT1YBL048W YDL176WQ12027 708 aa7.98□□□□□ -1.13
RRT1YBL048W YDL206WQ12424 762 aa7.97□□□□□ -1.13
RRT1YBL048W TRM1P15565 570 aaKnown RBP7.95□□□□□ -1.14
RRT1YBL048W TBF1Q02457 562 aa7.94□□□□□ -1.14
RRT1YBL048W MMP1Q12372 583 aa7.94□□□□□ -1.14
RRT1YBL048W MRT4P33201 236 aaKnown RBP7.93□□□□□ -1.14
RRT1YBL048W ATF2P53296 535 aa7.92□□□□□ -1.14
RRT1YBL048W KIP2P28743 706 aa7.91□□□□□ -1.14
RRT1YBL048W GLN1P32288 370 aaKnown RBP7.91□□□□□ -1.14
RRT1YBL048W YNR021WP53723 404 aaKnown RBP7.91□□□□□ -1.14
RRT1YBL048W IXR1P33417 597 aa7.9□□□□□ -1.14
RRT1YBL048W UGA3P26370 528 aa7.89□□□□□ -1.15
RRT1YBL048W RTT106P40161 455 aa7.89□□□□□ -1.15
RRT1YBL048W PTK2P47116 818 aaKnown RBP7.88□□□□□ -1.15
RRT1YBL048W ESS1P22696 170 aa7.87□□□□□ -1.15
RRT1YBL048W RSC30P38781 883 aa7.86□□□□□ -1.15
RRT1YBL048W ACO2P39533 789 aa7.86□□□□□ -1.15
RRT1YBL048W VAC17P25591 423 aa7.84□□□□□ -1.15
RRT1YBL048W GLC3P32775 704 aa7.84□□□□□ -1.15
RRT1YBL048W OPT2Q06593 877 aa7.84□□□□□ -1.15
RRT1YBL048W YJU3P28321 313 aa7.83□□□□□ -1.16
RRT1YBL048W NUP85P46673 744 aa7.83□□□□□ -1.16
RRT1YBL048W YLR346CQ06139 101 aa7.82□□□□□ -1.16
RRT1YBL048W TYW1Q08960 810 aaKnown RBP7.82□□□□□ -1.16
RRT1YBL048W SRF1Q12516 437 aa7.81□□□□□ -1.16
RRT1YBL048W KTR1P27810 393 aaKnown RBP7.8□□□□□ -1.16
RRT1YBL048W GLY1P37303 387 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms