RNA–Protein interactions for RNA: YBL048W

RRT1, Transcript of Protein of unknown function, yeastyeast

Gene RRT1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRT1YBL048W MTC1P47018 478 aaKnown RBP16.48■□□□□ 0.23
RRT1YBL048W DRS1P32892 752 aaKnown RBP15.06■□□□□ 0
RRT1YBL048W FAP1P53971 965 aa15.06■□□□□ 0
RRT1YBL048W PRY3P47033 881 aa14.18□□□□□ -0.14
RRT1YBL048W PRI1P10363 409 aa14.08□□□□□ -0.16
RRT1YBL048W AAD16Q02895 342 aa14.01□□□□□ -0.17
RRT1YBL048W ISW2Q08773 1120 aa13.71□□□□□ -0.21
RRT1YBL048W RPG1P38249 964 aaKnown RBP13.57□□□□□ -0.24
RRT1YBL048W YCK3P39962 524 aa13.48□□□□□ -0.25
RRT1YBL048W HAA1Q12753 694 aaKnown RBP13.36□□□□□ -0.27
RRT1YBL048W DIP2Q12220 943 aaPredicted RBP13.35□□□□□ -0.27
RRT1YBL048W TSR3Q12094 313 aaKnown RBP13.23□□□□□ -0.29
RRT1YBL048W RSE1Q04693 1361 aaKnown RBP12.97□□□□□ -0.33
RRT1YBL048W AVT3P36062 692 aa12.83□□□□□ -0.36
RRT1YBL048W MRPL32P25348 183 aa12.74□□□□□ -0.37
RRT1YBL048W RPL17AP05740 184 aaKnown RBP12.56□□□□□ -0.4
RRT1YBL048W RPL17BP46990 184 aaKnown RBP12.56□□□□□ -0.4
RRT1YBL048W REB1P21538 810 aa12.51□□□□□ -0.41
RRT1YBL048W BFR2Q06631 534 aaKnown RBP12.38□□□□□ -0.43
RRT1YBL048W YGL015CP33199 130 aa12.33□□□□□ -0.44
RRT1YBL048W SPT21P35209 758 aa12.06□□□□□ -0.48
RRT1YBL048W CDC27P38042 758 aa12.06□□□□□ -0.48
RRT1YBL048W YKR023WP36119 530 aaKnown RBP11.99□□□□□ -0.49
RRT1YBL048W UBP10P53874 792 aaPredicted RBP11.78□□□□□ -0.52
RRT1YBL048W TFC8Q12308 588 aa11.74□□□□□ -0.53
RRT1YBL048W MAP2P38174 421 aaKnown RBP11.7□□□□□ -0.54
RRT1YBL048W HOP09932 586 aa11.68□□□□□ -0.54
RRT1YBL048W DCD1P06773 312 aa11.62□□□□□ -0.55
RRT1YBL048W RIM101P33400 625 aa11.59□□□□□ -0.55
RRT1YBL048W BUD31P25337 157 aaPredicted RBP11.43□□□□□ -0.58
RRT1YBL048W SCY1P53009 804 aa11.41□□□□□ -0.58
RRT1YBL048W BCH2P36122 765 aa11.34□□□□□ -0.59
RRT1YBL048W SLX5P32828 619 aaKnown RBP11.29□□□□□ -0.6
RRT1YBL048W TGL3P40308 642 aa11.28□□□□□ -0.6
RRT1YBL048W TIF4632P39936 914 aaKnown RBP11.27□□□□□ -0.61
RRT1YBL048W OXP1P28273 1286 aa11.18□□□□□ -0.62
RRT1YBL048W EPS1P40557 701 aa11.02□□□□□ -0.65
RRT1YBL048W BDF1P35817 686 aa10.99□□□□□ -0.65
RRT1YBL048W UBP9P39967 754 aa10.98□□□□□ -0.65
RRT1YBL048W YIL055CP40523 627 aaKnown RBP10.96□□□□□ -0.65
RRT1YBL048W PTP3P40048 928 aa10.94□□□□□ -0.66
RRT1YBL048W RSM7P47150 247 aa10.84□□□□□ -0.67
RRT1YBL048W MST1P07236 462 aa10.81□□□□□ -0.68
RRT1YBL048W SIS1P25294 352 aaKnown RBP10.8□□□□□ -0.68
RRT1YBL048W TFA1P36100 482 aa10.79□□□□□ -0.68
RRT1YBL048W BBC1P47068 1157 aa10.77□□□□□ -0.69
RRT1YBL048W AI2P03876 854 aa10.75□□□□□ -0.69
RRT1YBL048W NSR1P27476 414 aaKnown RBP RIP-Chip data10.73□□□□□ -0.69not detected
RRT1YBL048W YAH1Q12184 172 aaKnown RBP10.72□□□□□ -0.69
RRT1YBL048W YOR238WQ08634 303 aa10.7□□□□□ -0.7
RRT1YBL048W YLR271WQ06152 274 aa10.61□□□□□ -0.71
RRT1YBL048W YAP5P40574 245 aa10.59□□□□□ -0.71
RRT1YBL048W YBL029C-AQ3E756 94 aa10.58□□□□□ -0.72
RRT1YBL048W PSD2P53037 1138 aaKnown RBP10.51□□□□□ -0.73
RRT1YBL048W VNX1P42839 908 aa10.5□□□□□ -0.73
RRT1YBL048W SSP1P38871 571 aa10.39□□□□□ -0.75
RRT1YBL048W SPP1Q03012 353 aa10.38□□□□□ -0.75
RRT1YBL048W WSC3Q12215 556 aa10.35□□□□□ -0.75
RRT1YBL048W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.35□□□□□ -0.75not detected
RRT1YBL048W MRM1P25270 412 aa10.33□□□□□ -0.76
RRT1YBL048W GTT3P39996 337 aa10.3□□□□□ -0.76
RRT1YBL048W TIF11P38912 153 aaKnown RBP10.29□□□□□ -0.76
RRT1YBL048W PIB1Q06651 286 aa10.22□□□□□ -0.77
RRT1YBL048W AIR2Q12476 344 aaKnown RBP10.21□□□□□ -0.77
RRT1YBL048W FKH1P40466 484 aa10.19□□□□□ -0.78
RRT1YBL048W MGA2P40578 1113 aa10.19□□□□□ -0.78
RRT1YBL048W CST9Q06032 482 aa10.19□□□□□ -0.78
RRT1YBL048W VPS29P38759 282 aa10.16□□□□□ -0.78
RRT1YBL048W IOC2Q12072 812 aa10.16□□□□□ -0.78
RRT1YBL048W ULI1P43604 169 aa10.15□□□□□ -0.78
RRT1YBL048W YMR1P47147 688 aaKnown RBP RIP-Chip data10.15□□□□□ -0.78not detected
RRT1YBL048W MSB4Q12317 492 aa10.13□□□□□ -0.79
RRT1YBL048W RTG3P38165 486 aa10.12□□□□□ -0.79
RRT1YBL048W LDB19Q12502 818 aa10.11□□□□□ -0.79
RRT1YBL048W DBP1P24784 617 aaKnown RBP10.09□□□□□ -0.79
RRT1YBL048W YJL171CP46992 396 aa10.07□□□□□ -0.8
RRT1YBL048W EAP1P36041 632 aaKnown RBP10.06□□□□□ -0.8
RRT1YBL048W STS1P38637 319 aa10.04□□□□□ -0.8
RRT1YBL048W YOL036WQ08206 761 aa10.04□□□□□ -0.8
RRT1YBL048W YFR006WP43590 535 aa10.02□□□□□ -0.81
RRT1YBL048W VMA1P17255 1071 aaKnown RBP10.01□□□□□ -0.81
RRT1YBL048W SAM3Q08986 587 aa10.01□□□□□ -0.81
RRT1YBL048W SET4P42948 560 aa10□□□□□ -0.81
RRT1YBL048W RCR1P38212 213 aa9.98□□□□□ -0.81
RRT1YBL048W TRP5P00931 707 aaKnown RBP9.97□□□□□ -0.81
RRT1YBL048W BMT6Q12291 365 aa9.95□□□□□ -0.82
RRT1YBL048W RTG1P32607 177 aa9.93□□□□□ -0.82
RRT1YBL048W YNL035CP53962 389 aaKnown RBP9.89□□□□□ -0.83
RRT1YBL048W SEC61P32915 480 aa9.88□□□□□ -0.83
RRT1YBL048W NCR1Q12200 1170 aa9.88□□□□□ -0.83
RRT1YBL048W ABP1P15891 592 aaKnown RBP9.82□□□□□ -0.84
RRT1YBL048W DAN4P47179 1161 aa9.8□□□□□ -0.84
RRT1YBL048W GYP5Q12344 894 aa9.8□□□□□ -0.84
RRT1YBL048W JIP4Q03361 876 aa9.77□□□□□ -0.85
RRT1YBL048W HTA1P04911 132 aaKnown RBP9.72□□□□□ -0.85
RRT1YBL048W HTA2P04912 132 aa9.72□□□□□ -0.85
RRT1YBL048W TFG1P41895 735 aaPredicted RBP9.71□□□□□ -0.86
RRT1YBL048W DCW1P36091 449 aa9.7□□□□□ -0.86
RRT1YBL048W PTC4P38089 393 aa9.69□□□□□ -0.86
RRT1YBL048W MAK11P20484 414 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms