RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 Rrp7aQ9D1C9 280 aaKnown RBP20.56■□□□□ 0.88
Sptbn4-202ENSMUST00000108362 Znf326O88291 580 aa20.55■□□□□ 0.88
Sptbn4-202ENSMUST00000108362 Speer4f1Q9D5Q6 258 aa20.55■□□□□ 0.88
Sptbn4-202ENSMUST00000108362 Mia2Q91ZV0 1396 aa20.53■□□□□ 0.88
Sptbn4-202ENSMUST00000108362 Nolc1E9Q5C9 702 aaKnown RBP20.52■□□□□ 0.88
Sptbn4-202ENSMUST00000108362 MsnP26041 577 aaKnown RBP20.52■□□□□ 0.88
Sptbn4-202ENSMUST00000108362 Rapgef2Q8CHG7 1496 aa20.52■□□□□ 0.88
Sptbn4-202ENSMUST00000108362 Stk24Q99KH8 431 aa20.51■□□□□ 0.87
Sptbn4-202ENSMUST00000108362 Zscan21Q07231 555 aa20.5■□□□□ 0.87
Sptbn4-202ENSMUST00000108362 Mtus2Q3UHD3 1353 aa20.5■□□□□ 0.87
Sptbn4-202ENSMUST00000108362 Rundc1Q0VDN7 615 aa20.49■□□□□ 0.87
Sptbn4-202ENSMUST00000108362 ChgaP26339 463 aaKnown RBP20.49■□□□□ 0.87
Sptbn4-202ENSMUST00000108362 Pcmtd1P59913 357 aa20.49■□□□□ 0.87
Sptbn4-202ENSMUST00000108362 Cluap1Q8R3P7 413 aa20.49■□□□□ 0.87
Sptbn4-202ENSMUST00000108362 Stag3O70576 1240 aa20.48■□□□□ 0.87
Sptbn4-202ENSMUST00000108362 Pkd2O35245 966 aa20.47■□□□□ 0.87
Sptbn4-202ENSMUST00000108362 Mak16Q8BGS0 296 aaKnown RBP20.46■□□□□ 0.87
Sptbn4-202ENSMUST00000108362 Ecm2Q5FW85 670 aa20.45■□□□□ 0.87
Sptbn4-202ENSMUST00000108362 Smarca4Q3TKT4 1613 aaKnown RBP20.45■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 MccE9PWI3 1003 aa20.45■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Aebp1Q640N1 1128 aa20.45■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Ipo8Q7TMY7 1010 aa20.45■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 NgefQ8CHT1 710 aa20.45■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Gtf3c3Q3TMP1 882 aa20.44■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Iqcf3Q9D498 203 aa20.44■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Clstn1Q9EPL2 979 aa20.44■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Atad2bE9Q166 1460 aaKnown RBP20.43■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Mfap1aC0HKD8 439 aaKnown RBP20.42■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Mfap1bC0HKD9 439 aaKnown RBP20.42■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Tmco5bQ80X59 307 aa20.42■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Kif27Q7M6Z4 1394 aa20.4■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 SlkO54988 1233 aa20.4■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 HnrnpuQ8VEK3 800 aaKnown RBP20.4■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Baz1bQ9Z277 1479 aa20.4■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Cttnbp2B9EJA2 1648 aa20.39■□□□□ 0.86
Sptbn4-202ENSMUST00000108362 Rrp12Q6P5B0 1295 aaKnown RBP20.39■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 Cux2P70298 1426 aa20.38■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 PtmsQ9D0J8 101 aaKnown RBP20.38■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 Sh3bp5Q9Z131 463 aa20.38■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 U2surpQ6NV83 1029 aaKnown RBP20.37■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 GorabQ8BRM2 368 aa20.37■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 Gm973E9Q295 1059 aa20.36■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 Znf330Q922H9 316 aa20.36■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 Plin1Q8CGN5 517 aa20.35■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 CgnP59242 1191 aa20.34■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 Fyco1Q8VDC1 1437 aa20.34■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 Map4P27546 1125 aaKnown RBP20.33■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 Rassf8Q8CJ96 419 aa20.33■□□□□ 0.85
Sptbn4-202ENSMUST00000108362 U2af1Q9D883 239 aaKnown RBP20.33■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 CntlnA2AM05 1397 aa20.32■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 Calcoco2A2A6M5 331 aa20.32■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 Anapc15P60007 132 aa20.32■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 Fhad1A6PWD2 1420 aa20.3■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 CrbnQ8C7D2 445 aa20.3■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 Ifit1bl1D3Z6F0 470 aa20.3■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 Golga2Q921M4 999 aa20.3■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 Kiaa0754Q69ZZ9 979 aa20.29■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 Trak1Q6PD31 939 aa20.28■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 Gpatch11Q3UFS4 262 aa20.28■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 Tmf1B9EKI3 1091 aa20.27■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 Arhgap35Q91YM2 1499 aa20.27■□□□□ 0.84
Sptbn4-202ENSMUST00000108362 Iffo2Q8R2V2 512 aa20.27■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 PrkcshO08795 521 aa20.26■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 Ddrgk1Q80WW9 315 aa20.26■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 Phldb1Q6PDH0 1371 aaKnown RBP20.26■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 Rpap1Q80TE0 1409 aa20.25■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 Sart3Q9JLI8 962 aaKnown RBP20.25■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 Dcaf11Q91VU6 549 aa20.25■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 Mphosph9A6H5Y1 991 aa20.25■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 Zfp777B9EKF4 885 aa20.25■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 Carmil1Q6EDY6 1374 aa20.24■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 Senp3Q9EP97 568 aaKnown RBP20.23■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 CrebrfQ8CDG5 640 aaKnown RBP20.23■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 VgfQ0VGU4 617 aa20.23■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 Cabp1Q9JLK7 227 aa20.22■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 Gtf2e1Q9D0D5 440 aa20.22■□□□□ 0.83
Sptbn4-202ENSMUST00000108362 RdxP26043 583 aaKnown RBP20.2■□□□□ 0.82
Sptbn4-202ENSMUST00000108362 Ksr2Q3UVC0 959 aa20.2■□□□□ 0.82
Sptbn4-202ENSMUST00000108362 Rtf1A2AQ19 715 aaKnown RBP20.19■□□□□ 0.82
Sptbn4-202ENSMUST00000108362 Iqgap2Q3UQ44 1575 aa20.18■□□□□ 0.82
Sptbn4-202ENSMUST00000108362 Becn1O88597 448 aa20.17■□□□□ 0.82
Sptbn4-202ENSMUST00000108362 Trim30aP15533 496 aa20.17■□□□□ 0.82
Sptbn4-202ENSMUST00000108362 Stk26Q99JT2 416 aa20.17■□□□□ 0.82
Sptbn4-202ENSMUST00000108362 MecomP14404 1042 aa20.16■□□□□ 0.82
Sptbn4-202ENSMUST00000108362 Birc3O08863 600 aa20.14■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 LrpprcQ6PB66 1392 aaKnown RBP20.14■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 Q3TQI7 289 aaKnown RBP20.13■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 Pknox2Q8BG99 474 aa20.13■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 4933402E13RikQ9D4D2 429 aa20.11■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 Tnnt1O88346 262 aa20.11■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 Pde3bQ61409 1100 aa20.1■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 Ush1cQ9ES64 910 aa20.1■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 Slc4a1apE9PX68 744 aa20.09■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 Srcin1Q9QWI6 1250 aa20.09■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 Ccdc146E9Q9F7 977 aa20.08■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 R3hcc1Q8BSI6 488 aa20.08■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 IbspQ61711 324 aa20.08■□□□□ 0.81
Sptbn4-202ENSMUST00000108362 Brpf1B2RRD7 1212 aa20.07■□□□□ 0.8
Sptbn4-202ENSMUST00000108362 Rsph3aQ3UFY4 516 aa20.07■□□□□ 0.8
Sptbn4-202ENSMUST00000108362 Fbxo2Q80UW2 297 aa20.07■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms