Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Gm25239-201ENSMUST00000174915 86 ntBASIC45.59■■■■■ 4.89
HnrnpuQ8VEK3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42.73■■■■■ 4.43
HnrnpuQ8VEK3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41.8■■■■■ 4.28
HnrnpuQ8VEK3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41.62■■■■■ 4.25
HnrnpuQ8VEK3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.38■■■■■ 4.21
HnrnpuQ8VEK3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41.34■■■■■ 4.21
HnrnpuQ8VEK3 Gm15042-201ENSMUST00000120212 883 ntBASIC40.56■■■■■ 4.08
HnrnpuQ8VEK3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
HnrnpuQ8VEK3 Gm15045-201ENSMUST00000117359 883 ntBASIC39.74■■■■□ 3.95
HnrnpuQ8VEK3 Psd-208ENSMUST00000224556 2034 ntBASIC39.69■■■■□ 3.94
HnrnpuQ8VEK3 Gm24109-201ENSMUST00000175489 103 ntBASIC39.17■■■■□ 3.86
HnrnpuQ8VEK3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC39.09■■■■□ 3.85
HnrnpuQ8VEK3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
HnrnpuQ8VEK3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC39.03■■■■□ 3.84
HnrnpuQ8VEK3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
HnrnpuQ8VEK3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.44■■■■□ 3.74
HnrnpuQ8VEK3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
HnrnpuQ8VEK3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.28■■■■□ 3.72
HnrnpuQ8VEK3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC38.27■■■■□ 3.72
HnrnpuQ8VEK3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
HnrnpuQ8VEK3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
HnrnpuQ8VEK3 Gm23366-201ENSMUST00000175022 89 ntBASIC38.22■■■■□ 3.71
HnrnpuQ8VEK3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.14■■■■□ 3.7
HnrnpuQ8VEK3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
HnrnpuQ8VEK3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38.05■■■■□ 3.68
HnrnpuQ8VEK3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
HnrnpuQ8VEK3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC38.01■■■■□ 3.68
HnrnpuQ8VEK3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
HnrnpuQ8VEK3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
HnrnpuQ8VEK3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
HnrnpuQ8VEK3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
HnrnpuQ8VEK3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37.63■■■■□ 3.61
HnrnpuQ8VEK3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC37.55■■■■□ 3.6
HnrnpuQ8VEK3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
HnrnpuQ8VEK3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
HnrnpuQ8VEK3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.31■■■■□ 3.56
HnrnpuQ8VEK3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
HnrnpuQ8VEK3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.23■■■■□ 3.55
HnrnpuQ8VEK3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC37.02■■■■□ 3.52
HnrnpuQ8VEK3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC37■■■■□ 3.51
HnrnpuQ8VEK3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
HnrnpuQ8VEK3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36.82■■■■□ 3.48
HnrnpuQ8VEK3 Gm10524-201ENSMUST00000181931 1893 ntBASIC36.6■■■■□ 3.45
HnrnpuQ8VEK3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.59■■■■□ 3.45
HnrnpuQ8VEK3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.45
HnrnpuQ8VEK3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
HnrnpuQ8VEK3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC36.51■■■■□ 3.43
HnrnpuQ8VEK3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
HnrnpuQ8VEK3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
HnrnpuQ8VEK3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
HnrnpuQ8VEK3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.16■■■■□ 3.38
HnrnpuQ8VEK3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
HnrnpuQ8VEK3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
HnrnpuQ8VEK3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC36.07■■■■□ 3.36
HnrnpuQ8VEK3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
HnrnpuQ8VEK3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
HnrnpuQ8VEK3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
HnrnpuQ8VEK3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.88■■■■□ 3.33
HnrnpuQ8VEK3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
HnrnpuQ8VEK3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.83■■■■□ 3.33
HnrnpuQ8VEK3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.77■■■■□ 3.32
HnrnpuQ8VEK3 Gm25238-201ENSMUST00000174914 89 ntBASIC35.74■■■■□ 3.31
HnrnpuQ8VEK3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.74■■■■□ 3.31
HnrnpuQ8VEK3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.74■■■■□ 3.31
HnrnpuQ8VEK3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.71■■■■□ 3.31
HnrnpuQ8VEK3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.71■■■■□ 3.31
HnrnpuQ8VEK3 Gm27325-201ENSMUST00000175467 74 ntBASIC35.67■■■■□ 3.3
HnrnpuQ8VEK3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35.67■■■■□ 3.3
HnrnpuQ8VEK3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.63■■■■□ 3.29
HnrnpuQ8VEK3 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.62■■■■□ 3.29
HnrnpuQ8VEK3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
HnrnpuQ8VEK3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.4■■■■□ 3.26
HnrnpuQ8VEK3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
HnrnpuQ8VEK3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
HnrnpuQ8VEK3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC35.31■■■■□ 3.24
HnrnpuQ8VEK3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
HnrnpuQ8VEK3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.17■■■■□ 3.22
HnrnpuQ8VEK3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
HnrnpuQ8VEK3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
HnrnpuQ8VEK3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
HnrnpuQ8VEK3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
HnrnpuQ8VEK3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC35.01■■■■□ 3.2
HnrnpuQ8VEK3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
HnrnpuQ8VEK3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
HnrnpuQ8VEK3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34.97■■■■□ 3.19
HnrnpuQ8VEK3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
HnrnpuQ8VEK3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
HnrnpuQ8VEK3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34.91■■■■□ 3.18
HnrnpuQ8VEK3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.91■■■■□ 3.18
HnrnpuQ8VEK3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
HnrnpuQ8VEK3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.86■■■■□ 3.17
HnrnpuQ8VEK3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
HnrnpuQ8VEK3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
HnrnpuQ8VEK3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
HnrnpuQ8VEK3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
HnrnpuQ8VEK3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
HnrnpuQ8VEK3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34.64■■■■□ 3.14
HnrnpuQ8VEK3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
HnrnpuQ8VEK3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34.61■■■■□ 3.13
HnrnpuQ8VEK3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms