RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 Rhox8Q6VSS7 320 aa28.37■■■□□ 2.13
Sptbn4-202ENSMUST00000108362 Rpgrip1Q9EPQ2 1331 aa26.45■■□□□ 1.82
Sptbn4-202ENSMUST00000108362 Ehmt2Q9Z148 1263 aaKnown RBP26.17■■□□□ 1.78
Sptbn4-202ENSMUST00000108362 Las1lA2BE28 776 aaKnown RBP25.65■■□□□ 1.7
Sptbn4-202ENSMUST00000108362 Cngb1E1AZ71 1325 aa25.55■■□□□ 1.68
Sptbn4-202ENSMUST00000108362 NischQ80TM9 1593 aa25.43■■□□□ 1.66
Sptbn4-202ENSMUST00000108362 Wdr66E9Q743 1299 aa25.34■■□□□ 1.65
Sptbn4-202ENSMUST00000108362 Zeb1Q64318 1117 aa25.2■■□□□ 1.62
Sptbn4-202ENSMUST00000108362 Ccdc136Q3TVA9 1136 aa25.11■■□□□ 1.61
Sptbn4-202ENSMUST00000108362 Pelp1Q9DBD5 1123 aaKnown RBP24.92■■□□□ 1.58
Sptbn4-202ENSMUST00000108362 Gab3Q8BSM5 595 aa24.82■■□□□ 1.56
Sptbn4-202ENSMUST00000108362 Ube2uB1AUC4 352 aa24.69■■□□□ 1.54
Sptbn4-202ENSMUST00000108362 Esf1Q3V1V3 845 aaKnown RBP24.67■■□□□ 1.54
Sptbn4-202ENSMUST00000108362 Trim41Q5NCC3 630 aa24.52■■□□□ 1.52
Sptbn4-202ENSMUST00000108362 CenpbP27790 599 aa24.5■■□□□ 1.51
Sptbn4-202ENSMUST00000108362 Acin1Q9JIX8 1338 aaKnown RBP24.47■■□□□ 1.51
Sptbn4-202ENSMUST00000108362 Amer1Q7TS75 1132 aa24.36■■□□□ 1.49
Sptbn4-202ENSMUST00000108362 Myt1lP97500 1187 aa24.3■■□□□ 1.48
Sptbn4-202ENSMUST00000108362 Npm2Q80W85 207 aa24.29■■□□□ 1.48
Sptbn4-202ENSMUST00000108362 NefmP08553 848 aa24.13■■□□□ 1.45
Sptbn4-202ENSMUST00000108362 UbtfP25976 765 aaKnown RBP24.04■■□□□ 1.44
Sptbn4-202ENSMUST00000108362 Slc24a1Q91WD8 1130 aa23.98■■□□□ 1.43
Sptbn4-202ENSMUST00000108362 Pcgf6Q99NA9 353 aa23.96■■□□□ 1.43
Sptbn4-202ENSMUST00000108362 Abcc9P70170 1546 aa23.94■■□□□ 1.42
Sptbn4-202ENSMUST00000108362 Stra8P70278 393 aa23.86■■□□□ 1.41
Sptbn4-202ENSMUST00000108362 Cdk11bP24788 784 aaKnown RBP23.82■■□□□ 1.4
Sptbn4-202ENSMUST00000108362 Ttbk1Q6PCN3 1308 aa23.75■■□□□ 1.39
Sptbn4-202ENSMUST00000108362 Ccdc180J3QNE4 1664 aa23.63■■□□□ 1.37
Sptbn4-202ENSMUST00000108362 Myt1Q8CFC2 1127 aa23.56■■□□□ 1.36
Sptbn4-202ENSMUST00000108362 Nop58Q6DFW4 536 aaKnown RBP23.55■■□□□ 1.36
Sptbn4-202ENSMUST00000108362 Ppargc1bQ8VHJ7 1014 aa23.54■■□□□ 1.36
Sptbn4-202ENSMUST00000108362 Supt5hO55201 1082 aaKnown RBP23.47■■□□□ 1.35
Sptbn4-202ENSMUST00000108362 Rtl1Q7M732 1744 aa23.47■■□□□ 1.35
Sptbn4-202ENSMUST00000108362 HrcG5E8J6 738 aa23.46■■□□□ 1.35
Sptbn4-202ENSMUST00000108362 Abcc8B2RUS7 1588 aa23.44■■□□□ 1.34
Sptbn4-202ENSMUST00000108362 4933416C03RikQ3V063 378 aa23.41■■□□□ 1.34
Sptbn4-202ENSMUST00000108362 Tnnt3Q9QZ47 272 aa23.33■■□□□ 1.33
Sptbn4-202ENSMUST00000108362 NrdcQ8BHG1 1161 aa23.26■■□□□ 1.31
Sptbn4-202ENSMUST00000108362 4930567H17RikQ3V0K5 233 aa23.25■■□□□ 1.31
Sptbn4-202ENSMUST00000108362 Eif5bQ05D44 1216 aaKnown RBP23.24■■□□□ 1.31
Sptbn4-202ENSMUST00000108362 NclP09405 707 aaKnown RBP23.2■■□□□ 1.31
Sptbn4-202ENSMUST00000108362 Zcchc6Q5BLK4 1491 aaKnown RBP23.18■■□□□ 1.3
Sptbn4-202ENSMUST00000108362 Neurod1Q60867 357 aa23.17■■□□□ 1.3
Sptbn4-202ENSMUST00000108362 Fam50aQ9WV03 339 aaKnown RBP23.16■■□□□ 1.3
Sptbn4-202ENSMUST00000108362 Il27Q8K3I6 234 aa23.14■■□□□ 1.29
Sptbn4-202ENSMUST00000108362 NeflP08551 543 aa23.05■■□□□ 1.28
Sptbn4-202ENSMUST00000108362 Anp32bQ9EST5 272 aaKnown RBP23.03■■□□□ 1.28
Sptbn4-202ENSMUST00000108362 Ap3b1Q9Z1T1 1105 aa23.02■■□□□ 1.28
Sptbn4-202ENSMUST00000108362 Gm35339A0A140LHH9 1649 aa22.99■■□□□ 1.27
Sptbn4-202ENSMUST00000108362 TonslQ6NZL6 1363 aa22.97■■□□□ 1.27
Sptbn4-202ENSMUST00000108362 Mier1Q5UAK0 511 aa22.9■■□□□ 1.26
Sptbn4-202ENSMUST00000108362 DiexfQ8BTT6 772 aaKnown RBP22.86■■□□□ 1.25
Sptbn4-202ENSMUST00000108362 Rtl5Q5DTT4 599 aa22.81■■□□□ 1.24
Sptbn4-202ENSMUST00000108362 Gm38655A0A286YDK6 273 aa22.69■■□□□ 1.22
Sptbn4-202ENSMUST00000108362 Os9Q8K2C7 672 aa22.68■■□□□ 1.22
Sptbn4-202ENSMUST00000108362 ClspnQ80YR7 1315 aa22.64■■□□□ 1.21
Sptbn4-202ENSMUST00000108362 Anp32aO35381 247 aa22.62■■□□□ 1.21
Sptbn4-202ENSMUST00000108362 DaxxO35613 739 aa22.61■■□□□ 1.21
Sptbn4-202ENSMUST00000108362 Csrnp3P59055 597 aa22.53■■□□□ 1.2
Sptbn4-202ENSMUST00000108362 Mapk8ip2Q9ERE9 830 aa22.53■■□□□ 1.2
Sptbn4-202ENSMUST00000108362 Sall2Q9QX96 1004 aa22.49■■□□□ 1.19
Sptbn4-202ENSMUST00000108362 Plekhg3Q4VAC9 1341 aa22.44■■□□□ 1.18
Sptbn4-202ENSMUST00000108362 Anks4bQ8K3X6 423 aa22.41■■□□□ 1.18
Sptbn4-202ENSMUST00000108362 Lmod2Q3UHZ5 550 aa22.39■■□□□ 1.17
Sptbn4-202ENSMUST00000108362 Eid3Q3V124 375 aa22.36■■□□□ 1.17
Sptbn4-202ENSMUST00000108362 Rb1cc1Q9ESK9 1588 aa22.35■■□□□ 1.17
Sptbn4-202ENSMUST00000108362 Zbtb7cQ8VCZ7 619 aa22.32■■□□□ 1.16
Sptbn4-202ENSMUST00000108362 Aplp2Q06335 707 aa22.27■■□□□ 1.16
Sptbn4-202ENSMUST00000108362 Zbtb4Q5F293 982 aa22.25■■□□□ 1.15
Sptbn4-202ENSMUST00000108362 Dcaf1Q80TR8 1506 aa22.24■■□□□ 1.15
Sptbn4-202ENSMUST00000108362 ArxO35085 564 aa22.18■■□□□ 1.14
Sptbn4-202ENSMUST00000108362 Brd4Q9ESU6 1400 aaKnown RBP22.16■■□□□ 1.14
Sptbn4-202ENSMUST00000108362 Chic1Q8CBW7 227 aa22.13■■□□□ 1.13
Sptbn4-202ENSMUST00000108362 Hnrnpul2Q00PI9 745 aaKnown RBP22.12■■□□□ 1.13
Sptbn4-202ENSMUST00000108362 Cep164Q5DU05 1446 aa22.09■■□□□ 1.13
Sptbn4-202ENSMUST00000108362 Ppp4r2Q0VGB7 417 aa22.07■■□□□ 1.12
Sptbn4-202ENSMUST00000108362 Calr4Q3TQS0 420 aa22.06■■□□□ 1.12
Sptbn4-202ENSMUST00000108362 Prdm10Q3UTQ7 1184 aa22.04■■□□□ 1.12
Sptbn4-202ENSMUST00000108362 Polr3glQ8R0C0 218 aa22.03■■□□□ 1.12
Sptbn4-202ENSMUST00000108362 Nlrp6Q91WS2 869 aa21.96■■□□□ 1.11
Sptbn4-202ENSMUST00000108362 NacadQ5SWP3 1504 aa21.96■■□□□ 1.11
Sptbn4-202ENSMUST00000108362 1700123L14RikQ3V2K7 440 aa21.9■■□□□ 1.1
Sptbn4-202ENSMUST00000108362 Npm1Q61937 292 aaKnown RBP21.9■■□□□ 1.1
Sptbn4-202ENSMUST00000108362 Baz1aO88379 1555 aa21.88■■□□□ 1.09
Sptbn4-202ENSMUST00000108362 Wdr43Q6ZQL4 677 aaKnown RBP21.88■■□□□ 1.09
Sptbn4-202ENSMUST00000108362 Erich6D3Z6S9 713 aa21.85■■□□□ 1.09
Sptbn4-202ENSMUST00000108362 Clip1Q922J3 1391 aa21.82■■□□□ 1.08
Sptbn4-202ENSMUST00000108362 Mrs2Q5NCE8 434 aa21.81■■□□□ 1.08
Sptbn4-202ENSMUST00000108362 Rad21Q61550 635 aaKnown RBP21.75■■□□□ 1.07
Sptbn4-202ENSMUST00000108362 Rangap1P46061 589 aaKnown RBP21.73■■□□□ 1.07
Sptbn4-202ENSMUST00000108362 Atp1b4Q99ME6 356 aa21.72■■□□□ 1.07
Sptbn4-202ENSMUST00000108362 Fam71e1A1L3C1 212 aa21.71■■□□□ 1.07
Sptbn4-202ENSMUST00000108362 Ythdc1E9Q5K9 736 aaKnown RBP21.71■■□□□ 1.07
Sptbn4-202ENSMUST00000108362 Ifnlr1Q8CGK5 535 aa21.7■■□□□ 1.06
Sptbn4-202ENSMUST00000108362 Gm13697A2AK42 830 aa21.69■■□□□ 1.06
Sptbn4-202ENSMUST00000108362 Hsp90aa1P07901 733 aaKnown RBP21.67■■□□□ 1.06
Sptbn4-202ENSMUST00000108362 Ccer2J3QPU5 274 aa21.65■■□□□ 1.06
Sptbn4-202ENSMUST00000108362 Kdm5dQ62240 1548 aa21.65■■□□□ 1.06
Sptbn4-202ENSMUST00000108362 Upf2A2AT37 1269 aaKnown RBP21.64■■□□□ 1.06
Sptbn4-202ENSMUST00000108362 Aebp2Q9Z248 504 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms