Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Gm25239-201ENSMUST00000174915 86 ntBASIC38.93■■■■□ 3.82
Becn1O88597 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
Becn1O88597 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Becn1O88597 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.34■■■■□ 3.57
Becn1O88597 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Becn1O88597 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
Becn1O88597 Psd-208ENSMUST00000224556 2034 ntBASIC36.7■■■■□ 3.47
Becn1O88597 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
Becn1O88597 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Becn1O88597 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35■■■■□ 3.19
Becn1O88597 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Becn1O88597 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Becn1O88597 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.84■■■■□ 3.17
Becn1O88597 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Becn1O88597 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Becn1O88597 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Becn1O88597 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
Becn1O88597 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
Becn1O88597 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Becn1O88597 Gm15042-201ENSMUST00000120212 883 ntBASIC34.3■■■■□ 3.08
Becn1O88597 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Becn1O88597 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Becn1O88597 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Becn1O88597 Gm24109-201ENSMUST00000175489 103 ntBASIC33.59■■■□□ 2.97
Becn1O88597 Gm15045-201ENSMUST00000117359 883 ntBASIC33.57■■■□□ 2.96
Becn1O88597 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC33.49■■■□□ 2.95
Becn1O88597 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC33.46■■■□□ 2.95
Becn1O88597 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Becn1O88597 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.45■■■□□ 2.95
Becn1O88597 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Becn1O88597 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.24■■■□□ 2.91
Becn1O88597 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.23■■■□□ 2.91
Becn1O88597 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Becn1O88597 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
Becn1O88597 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Becn1O88597 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.15■■■□□ 2.9
Becn1O88597 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Becn1O88597 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Becn1O88597 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Becn1O88597 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Becn1O88597 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
Becn1O88597 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.63■■■□□ 2.81
Becn1O88597 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Becn1O88597 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Becn1O88597 Gm23366-201ENSMUST00000175022 89 ntBASIC32.56■■■□□ 2.8
Becn1O88597 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.52■■■□□ 2.8
Becn1O88597 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Becn1O88597 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Becn1O88597 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Becn1O88597 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Becn1O88597 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
Becn1O88597 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Becn1O88597 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.15■■■□□ 2.74
Becn1O88597 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
Becn1O88597 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC32.05■■■□□ 2.72
Becn1O88597 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Becn1O88597 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
Becn1O88597 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Becn1O88597 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.96■■■□□ 2.71
Becn1O88597 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.7
Becn1O88597 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Becn1O88597 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Becn1O88597 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
Becn1O88597 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
Becn1O88597 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
Becn1O88597 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Becn1O88597 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
Becn1O88597 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Becn1O88597 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Becn1O88597 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Becn1O88597 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Becn1O88597 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Becn1O88597 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Becn1O88597 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.62■■■□□ 2.65
Becn1O88597 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Becn1O88597 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.59■■■□□ 2.65
Becn1O88597 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Becn1O88597 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.55■■■□□ 2.64
Becn1O88597 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.49■■■□□ 2.63
Becn1O88597 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.47■■■□□ 2.63
Becn1O88597 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Becn1O88597 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Becn1O88597 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Becn1O88597 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Becn1O88597 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Becn1O88597 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Becn1O88597 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Becn1O88597 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Becn1O88597 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Becn1O88597 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
Becn1O88597 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Becn1O88597 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Becn1O88597 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Becn1O88597 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.14■■■□□ 2.58
Becn1O88597 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Becn1O88597 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.09■■■□□ 2.57
Becn1O88597 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Becn1O88597 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Becn1O88597 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Becn1O88597 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms