Protein–RNA interactions for Protein: O70576

Stag3, Cohesin subunit SA-3, mousemouse

Predictions only

Length 1,240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag3O70576 Gm25239-201ENSMUST00000174915 86 ntBASIC54.19■■■■■ 6.27
Stag3O70576 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC50.17■■■■■ 5.62
Stag3O70576 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC49.45■■■■■ 5.51
Stag3O70576 Gm15042-201ENSMUST00000120212 883 ntBASIC47.23■■■■■ 5.15
Stag3O70576 Gm24109-201ENSMUST00000175489 103 ntBASIC47■■■■■ 5.11
Stag3O70576 Gm15045-201ENSMUST00000117359 883 ntBASIC46.19■■■■■ 4.98
Stag3O70576 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC45.96■■■■■ 4.95
Stag3O70576 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC45.88■■■■■ 4.94
Stag3O70576 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC45.75■■■■■ 4.91
Stag3O70576 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC45.5■■■■■ 4.87
Stag3O70576 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC45.24■■■■■ 4.83
Stag3O70576 Gm23366-201ENSMUST00000175022 89 ntBASIC45.22■■■■■ 4.83
Stag3O70576 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC44.99■■■■■ 4.79
Stag3O70576 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC44.5■■■■■ 4.71
Stag3O70576 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC44.11■■■■■ 4.65
Stag3O70576 AC153911.1-202ENSMUST00000218534 1034 ntBASIC43.9■■■■■ 4.62
Stag3O70576 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC43.66■■■■■ 4.58
Stag3O70576 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC43.63■■■■■ 4.58
Stag3O70576 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC43.58■■■■■ 4.57
Stag3O70576 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC43.51■■■■■ 4.56
Stag3O70576 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC43.48■■■■■ 4.55
Stag3O70576 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC43.4■■■■■ 4.54
Stag3O70576 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC43.29■■■■■ 4.52
Stag3O70576 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC43.22■■■■■ 4.51
Stag3O70576 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC43■■■■■ 4.47
Stag3O70576 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC42.96■■■■■ 4.47
Stag3O70576 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC42.91■■■■■ 4.46
Stag3O70576 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC42.9■■■■■ 4.46
Stag3O70576 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC42.9■■■■■ 4.46
Stag3O70576 Gm25238-201ENSMUST00000174914 89 ntBASIC42.83■■■■■ 4.45
Stag3O70576 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC42.79■■■■■ 4.44
Stag3O70576 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC42.77■■■■■ 4.44
Stag3O70576 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC42.64■■■■■ 4.42
Stag3O70576 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC42.58■■■■■ 4.41
Stag3O70576 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC42.51■■■■■ 4.4
Stag3O70576 Psd-208ENSMUST00000224556 2034 ntBASIC42.2■■■■■ 4.35
Stag3O70576 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC42.18■■■■■ 4.34
Stag3O70576 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC41.92■■■■■ 4.3
Stag3O70576 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC41.76■■■■■ 4.28
Stag3O70576 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC41.74■■■■■ 4.27
Stag3O70576 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC41.68■■■■■ 4.26
Stag3O70576 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC41.67■■■■■ 4.26
Stag3O70576 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC41.43■■■■■ 4.22
Stag3O70576 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC41.42■■■■■ 4.22
Stag3O70576 Gm27325-201ENSMUST00000175467 74 ntBASIC41.39■■■■■ 4.22
Stag3O70576 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC41.39■■■■■ 4.22
Stag3O70576 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
Stag3O70576 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
Stag3O70576 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC41.2■■■■■ 4.19
Stag3O70576 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
Stag3O70576 Gm25262-201ENSMUST00000174934 133 ntBASIC41.05■■■■■ 4.16
Stag3O70576 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC40.97■■■■■ 4.15
Stag3O70576 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC40.78■■■■■ 4.12
Stag3O70576 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
Stag3O70576 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC40.74■■■■■ 4.11
Stag3O70576 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC40.74■■■■■ 4.11
Stag3O70576 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC40.73■■■■■ 4.11
Stag3O70576 Rab21-202ENSMUST00000218831 843 ntBASIC40.69■■■■■ 4.1
Stag3O70576 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
Stag3O70576 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC40.59■■■■■ 4.09
Stag3O70576 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
Stag3O70576 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC40.38■■■■■ 4.05
Stag3O70576 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC40.36■■■■■ 4.05
Stag3O70576 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
Stag3O70576 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC40.31■■■■■ 4.04
Stag3O70576 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC40.26■■■■■ 4.04
Stag3O70576 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC40.26■■■■■ 4.04
Stag3O70576 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC40.25■■■■■ 4.03
Stag3O70576 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC40.22■■■■■ 4.03
Stag3O70576 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC40.18■■■■■ 4.02
Stag3O70576 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC40.18■■■■■ 4.02
Stag3O70576 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC40.16■■■■■ 4.02
Stag3O70576 Gm26115-201ENSMUST00000175605 87 ntBASIC40.06■■■■■ 4
Stag3O70576 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC40.06■■■■■ 4
Stag3O70576 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 4
Stag3O70576 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC40■■■■□ 3.99
Stag3O70576 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC39.99■■■■□ 3.99
Stag3O70576 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC39.97■■■■□ 3.99
Stag3O70576 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Stag3O70576 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC39.92■■■■□ 3.98
Stag3O70576 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
Stag3O70576 Gm8109-201ENSMUST00000194076 746 ntBASIC39.85■■■■□ 3.97
Stag3O70576 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
Stag3O70576 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
Stag3O70576 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
Stag3O70576 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC39.77■■■■□ 3.96
Stag3O70576 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC39.76■■■■□ 3.96
Stag3O70576 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
Stag3O70576 Gm10524-201ENSMUST00000181931 1893 ntBASIC39.7■■■■□ 3.95
Stag3O70576 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC39.69■■■■□ 3.94
Stag3O70576 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC39.67■■■■□ 3.94
Stag3O70576 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC39.67■■■■□ 3.94
Stag3O70576 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC39.64■■■■□ 3.94
Stag3O70576 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC39.56■■■■□ 3.92
Stag3O70576 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
Stag3O70576 CT025624.2-201ENSMUST00000223609 1909 ntBASIC39.44■■■■□ 3.9
Stag3O70576 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC39.43■■■■□ 3.9
Stag3O70576 Gm42596-201ENSMUST00000196305 1958 ntBASIC39.41■■■■□ 3.9
Stag3O70576 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC39.41■■■■□ 3.9
Stag3O70576 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC39.38■■■■□ 3.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms