RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W NDC80P40460 691 aa4.21□□□□□ -1.73
ECM16YMR128W TFG2P41896 400 aaPredicted RBP4.21□□□□□ -1.73
ECM16YMR128W APP1P53933 587 aa4.21□□□□□ -1.73
ECM16YMR128W TRS120Q04183 1289 aa4.21□□□□□ -1.73
ECM16YMR128W SPO12P17123 173 aa4.21□□□□□ -1.74
ECM16YMR128W SPT8P38915 602 aa4.21□□□□□ -1.74
ECM16YMR128W SNU71P53207 620 aaKnown RBP4.21□□□□□ -1.74
ECM16YMR128W RMT2Q03305 412 aa4.21□□□□□ -1.74
ECM16YMR128W PUS5Q06244 254 aa4.21□□□□□ -1.74
ECM16YMR128W SWI4P25302 1093 aaKnown RBP4.21□□□□□ -1.74
ECM16YMR128W UGA4P32837 571 aa4.21□□□□□ -1.74
ECM16YMR128W PRE3P38624 215 aa4.21□□□□□ -1.74
ECM16YMR128W SSN3P39073 555 aa4.21□□□□□ -1.74
ECM16YMR128W CAJ1P39101 391 aa4.21□□□□□ -1.74
ECM16YMR128W RSC4Q02206 625 aa4.21□□□□□ -1.74
ECM16YMR128W PFK2P16862 959 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74not detected
ECM16YMR128W COQ1P18900 473 aa4.2□□□□□ -1.74
ECM16YMR128W RPO26P20435 155 aa4.2□□□□□ -1.74
ECM16YMR128W RAD53P22216 821 aa4.2□□□□□ -1.74
ECM16YMR128W SPC110P32380 944 aa4.2□□□□□ -1.74
ECM16YMR128W HFM1P51979 1187 aa4.2□□□□□ -1.74
ECM16YMR128W ERG5P54781 538 aa4.2□□□□□ -1.74
ECM16YMR128W EST2Q06163 884 aa4.2□□□□□ -1.74
ECM16YMR128W CWC2Q12046 339 aaPredicted RBP4.2□□□□□ -1.74
ECM16YMR128W RPP1BP10622 106 aaKnown RBP4.2□□□□□ -1.74
ECM16YMR128W DPB3P27344 201 aa4.2□□□□□ -1.74
ECM16YMR128W RPC25P35718 212 aa4.2□□□□□ -1.74
ECM16YMR128W EFM4P40516 257 aa4.2□□□□□ -1.74
ECM16YMR128W GNP1P48813 663 aa4.2□□□□□ -1.74
ECM16YMR128W CUE3P53137 624 aaKnown RBP4.2□□□□□ -1.74
ECM16YMR128W ALF1P53904 254 aa4.2□□□□□ -1.74
ECM16YMR128W EIS1Q05050 843 aaKnown RBP4.2□□□□□ -1.74
ECM16YMR128W YDR338CQ05497 695 aa4.2□□□□□ -1.74
ECM16YMR128W PSR2Q07949 397 aa4.2□□□□□ -1.74
ECM16YMR128W PSO2P30620 661 aa4.2□□□□□ -1.74
ECM16YMR128W SPT23P35210 1082 aa4.2□□□□□ -1.74
ECM16YMR128W DEF1P35732 738 aaKnown RBP4.2□□□□□ -1.74
ECM16YMR128W MUD2P36084 527 aaKnown RBP4.2□□□□□ -1.74
ECM16YMR128W GLO3P38682 493 aaKnown RBP4.2□□□□□ -1.74
ECM16YMR128W UME1Q03010 460 aa4.2□□□□□ -1.74
ECM16YMR128W MTC5Q03897 1148 aa4.2□□□□□ -1.74
ECM16YMR128W GFD1Q04839 188 aaKnown RBP4.2□□□□□ -1.74
ECM16YMR128W ATG20Q07528 640 aa4.2□□□□□ -1.74
ECM16YMR128W GET3Q12154 354 aaKnown RBP4.2□□□□□ -1.74
ECM16YMR128W RMP1Q12530 201 aa4.2□□□□□ -1.74
ECM16YMR128W RAD57P25301 460 aa4.19□□□□□ -1.74
ECM16YMR128W SKI2P35207 1287 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74not detected
ECM16YMR128W SPC42P36094 363 aa4.19□□□□□ -1.74
ECM16YMR128W FAA3P39002 694 aa4.19□□□□□ -1.74
ECM16YMR128W AIP1P46680 615 aaKnown RBP4.19□□□□□ -1.74
ECM16YMR128W YJR079WP47126 109 aa4.19□□□□□ -1.74
ECM16YMR128W EBS1Q03466 884 aaKnown RBP4.19□□□□□ -1.74
ECM16YMR128W ENV9Q08651 330 aa4.19□□□□□ -1.74
ECM16YMR128W YPL216WQ08964 1102 aa4.19□□□□□ -1.74
ECM16YMR128W RAD1P06777 1100 aa4.19□□□□□ -1.74
ECM16YMR128W ERG7P38604 731 aa4.19□□□□□ -1.74
ECM16YMR128W SHQ1P40486 507 aaPredicted RBP4.19□□□□□ -1.74
ECM16YMR128W YIR042CP40586 236 aa4.19□□□□□ -1.74
ECM16YMR128W HCR1Q05775 265 aaKnown RBP4.19□□□□□ -1.74
ECM16YMR128W PUN1Q06991 263 aa4.19□□□□□ -1.74
ECM16YMR128W RRP6Q12149 733 aaKnown RBP4.19□□□□□ -1.74
ECM16YMR128W SSF2Q12153 453 aaPredicted RBP4.19□□□□□ -1.74
ECM16YMR128W SNU66Q12420 587 aaPredicted RBP4.19□□□□□ -1.74
ECM16YMR128W CBP3P21560 335 aa4.19□□□□□ -1.74
ECM16YMR128W SPL2P38839 148 aa4.19□□□□□ -1.74
ECM16YMR128W NGL3Q03210 505 aa4.19□□□□□ -1.74
ECM16YMR128W VPS16Q03308 798 aa4.19□□□□□ -1.74
ECM16YMR128W OYE2Q03558 400 aaKnown RBP4.19□□□□□ -1.74
ECM16YMR128W VAC14Q06708 880 aa4.19□□□□□ -1.74
ECM16YMR128W HMI1Q12039 706 aa4.19□□□□□ -1.74
ECM16YMR128W CDC37P06101 506 aaKnown RBP4.18□□□□□ -1.74
ECM16YMR128W MTF2P10849 440 aa4.18□□□□□ -1.74
ECM16YMR128W TAD1P53065 400 aa4.18□□□□□ -1.74
ECM16YMR128W MMR1Q06324 491 aa4.18□□□□□ -1.74
ECM16YMR128W ATG13Q06628 738 aa4.18□□□□□ -1.74
ECM16YMR128W OMS1Q06668 471 aa4.18□□□□□ -1.74
ECM16YMR128W TOM70P07213 617 aaKnown RBP4.18□□□□□ -1.74
ECM16YMR128W OSH3P38713 996 aaKnown RBP4.18□□□□□ -1.74
ECM16YMR128W MIP6P38760 659 aaKnown RBP4.18□□□□□ -1.74
ECM16YMR128W PCI8P40512 444 aa4.18□□□□□ -1.74
ECM16YMR128W TFC6Q06339 672 aa4.18□□□□□ -1.74
ECM16YMR128W SPN1Q06505 410 aaPredicted RBP4.18□□□□□ -1.74
ECM16YMR128W SSP2Q08646 371 aa4.18□□□□□ -1.74
ECM16YMR128W TAH18Q12181 623 aa4.18□□□□□ -1.74
ECM16YMR128W RRI2Q12348 645 aa4.18□□□□□ -1.74
ECM16YMR128W SEC23P15303 768 aaKnown RBP4.18□□□□□ -1.74
ECM16YMR128W RRP1P35178 278 aaPredicted RBP4.18□□□□□ -1.74
ECM16YMR128W SAP190P36123 1033 aa4.18□□□□□ -1.74
ECM16YMR128W CSM2P40465 213 aa4.18□□□□□ -1.74
ECM16YMR128W MAL13P53338 473 aa4.18□□□□□ -1.74
ECM16YMR128W PRP42Q03776 544 aaKnown RBP4.18□□□□□ -1.74
ECM16YMR128W ADR1P07248 1323 aa4.18□□□□□ -1.74
ECM16YMR128W PRP16P15938 1071 aaPredicted RBP4.17□□□□□ -1.74
ECM16YMR128W MRPL33P20084 86 aa4.17□□□□□ -1.74
ECM16YMR128W PRE10P21242 288 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
ECM16YMR128W PDC6P26263 563 aaKnown RBP4.17□□□□□ -1.74
ECM16YMR128W YKL133CP36066 463 aa4.17□□□□□ -1.74
ECM16YMR128W MCX1P38323 520 aaPredicted RBP4.17□□□□□ -1.74
ECM16YMR128W YHR020WP38708 688 aaKnown RBP4.17□□□□□ -1.74
ECM16YMR128W CTM1P38818 585 aa4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms