Protein–RNA interactions for Protein: P35178

RRP1, Ribosomal RNA-processing protein 1, yeastyeast

Predicted RBP Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP1P35178 NSR1YGR159C 1245 nt21.31■■□□□ 1
RRP1P35178 YML009W-BYML009W-B 477 nt20.97■□□□□ 0.95
RRP1P35178 NOP1YDL014W 984 nt20.15■□□□□ 0.82
RRP1P35178 MDJ1YFL016C 1536 nt19.49■□□□□ 0.71
RRP1P35178 YKL036CYKL036C 393 nt18.13■□□□□ 0.49
RRP1P35178 YJL027CYJL027C 417 nt17.96■□□□□ 0.47
RRP1P35178 SRX1YKL086W 384 nt17.55■□□□□ 0.4
RRP1P35178 Q0297Q0297 156 nt17.37■□□□□ 0.37
RRP1P35178 DBP2YNL112W 1641 nt16.95■□□□□ 0.3
RRP1P35178 YBR190WYBR190W 312 nt16.76■□□□□ 0.27
RRP1P35178 YCR051WYCR051W 669 nt16.68■□□□□ 0.26
RRP1P35178 SCS3YGL126W 1143 nt16.44■□□□□ 0.22
RRP1P35178 RTC3YHR087W 336 nt16.44■□□□□ 0.22
RRP1P35178 TRN1tP(UGG)A 72 nt16.2■□□□□ 0.18
RRP1P35178 SUF9tP(UGG)F 72 nt16.2■□□□□ 0.18
RRP1P35178 SUF8tP(UGG)H 72 nt16.2■□□□□ 0.18
RRP1P35178 tP(UGG)LtP(UGG)L 72 nt16.2■□□□□ 0.18
RRP1P35178 SUF7tP(UGG)M 72 nt16.2■□□□□ 0.18
RRP1P35178 tP(UGG)N1tP(UGG)N1 72 nt16.2■□□□□ 0.18
RRP1P35178 tP(UGG)N2tP(UGG)N2 72 nt16.2■□□□□ 0.18
RRP1P35178 tP(UGG)O1tP(UGG)O1 72 nt16.2■□□□□ 0.18
RRP1P35178 SUF11tP(UGG)O2 72 nt16.2■□□□□ 0.18
RRP1P35178 CCC1YLR220W 969 nt16.13■□□□□ 0.17
RRP1P35178 SSA3YBL075C 1950 nt16.03■□□□□ 0.16
RRP1P35178 RVS167YDR388W 1449 nt15.91■□□□□ 0.14
RRP1P35178 YOL085CYOL085C 342 nt15.7■□□□□ 0.1
RRP1P35178 PUT4YOR348C 1884 nt15.65■□□□□ 0.1
RRP1P35178 RPP1BYDL130W 321 nt15.62■□□□□ 0.09
RRP1P35178 SCJ1YMR214W 1134 nt15.61■□□□□ 0.09
RRP1P35178 PKP1YIL042C 1185 nt15.48■□□□□ 0.07
RRP1P35178 ARE1YCR048W 1833 nt15.19■□□□□ 0.02
RRP1P35178 POA1YBR022W 534 nt15.17■□□□□ 0.02
RRP1P35178 tP(UGG)O3tP(UGG)O3 72 nt15.16■□□□□ 0.02
RRP1P35178 SHR5YOL110W 714 nt15.16■□□□□ 0.02
RRP1P35178 URN1YPR152C 1398 nt15.12■□□□□ 0.01
RRP1P35178 SAH1YER043C 1350 nt15.08■□□□□ 0
RRP1P35178 YHR049C-AYHR049C-A 297 nt15.03■□□□□ -0
RRP1P35178 PET122YER153C 765 nt14.99□□□□□ -0.01
RRP1P35178 OPI9YLR338W 858 nt14.99□□□□□ -0.01
RRP1P35178 DEP1YAL013W 1218 nt14.98□□□□□ -0.01
RRP1P35178 BSC6YOL137W 1494 nt14.92□□□□□ -0.02
RRP1P35178 RPN10YHR200W 807 nt14.79□□□□□ -0.04
RRP1P35178 SCR1SCR1 522 nt14.73□□□□□ -0.05
RRP1P35178 ATS1YAL020C 1002 nt14.7□□□□□ -0.06
RRP1P35178 BUD23YCR047C 828 nt14.69□□□□□ -0.06
RRP1P35178 YDJ1YNL064C 1230 nt14.65□□□□□ -0.06
RRP1P35178 YNL208WYNL208W 600 nt14.65□□□□□ -0.06
RRP1P35178 PUN1YLR414C 792 nt14.58□□□□□ -0.08
RRP1P35178 SPT5YML010W 3192 nt14.55□□□□□ -0.08
RRP1P35178 PTC2YER089C 1395 nt14.51□□□□□ -0.09
RRP1P35178 RRN5YLR141W 1092 nt14.51□□□□□ -0.09
RRP1P35178 GAR1YHR089C 618 nt14.48□□□□□ -0.09
RRP1P35178 NAB2YGL122C 1578 nt14.4□□□□□ -0.1
RRP1P35178 SSA4YER103W 1929 nt14.39□□□□□ -0.11
RRP1P35178 YJR018WYJR018W 363 nt14.39□□□□□ -0.11
RRP1P35178 YER088W-BYER088W-B 147 nt14.2□□□□□ -0.14
RRP1P35178 FPR4YLR449W 1179 nt14.12□□□□□ -0.15
RRP1P35178 DAL1YIR027C 1383 nt14.09□□□□□ -0.15
RRP1P35178 FIS1YIL065C 468 nt14.07□□□□□ -0.16
RRP1P35178 RSB1YOR049C 1065 nt14.07□□□□□ -0.16
RRP1P35178 MEP2YNL142W 1500 nt14.05□□□□□ -0.16
RRP1P35178 TIR1YER011W 765 nt13.99□□□□□ -0.17
RRP1P35178 RPP2BYDR382W 333 nt13.98□□□□□ -0.17
RRP1P35178 INM2YDR287W 879 nt13.96□□□□□ -0.17
RRP1P35178 PHO4YFR034C 939 nt13.95□□□□□ -0.18
RRP1P35178 YJR120WYJR120W 351 nt13.94□□□□□ -0.18
RRP1P35178 SSA1YAL005C 1929 nt13.93□□□□□ -0.18
RRP1P35178 YPS1YLR120C 1710 nt13.87□□□□□ -0.19
RRP1P35178 BDF1YLR399C 2061 nt13.86□□□□□ -0.19
RRP1P35178 DCW1YKL046C 1350 nt13.83□□□□□ -0.2
RRP1P35178 YHR165W-AYHR165W-A 312 nt13.82□□□□□ -0.2
RRP1P35178 YBL100CYBL100C 315 nt13.73□□□□□ -0.21
RRP1P35178 YDR095CYDR095C 411 nt13.67□□□□□ -0.22
RRP1P35178 TAT1YBR069C 1860 nt13.66□□□□□ -0.22
RRP1P35178 YMR090WYMR090W 684 nt13.66□□□□□ -0.22
RRP1P35178 EMI2YDR516C 1503 nt13.64□□□□□ -0.23
RRP1P35178 PST2YDR032C 597 nt13.64□□□□□ -0.23
RRP1P35178 YBR220CYBR220C 1683 nt13.55□□□□□ -0.24
RRP1P35178 FUN26YAL022C 1554 nt13.54□□□□□ -0.24
RRP1P35178 BDH2YAL061W 1254 nt13.54□□□□□ -0.24
RRP1P35178 SRB2YHR041C 633 nt13.53□□□□□ -0.24
RRP1P35178 ALF1YNL148C 765 nt13.52□□□□□ -0.25
RRP1P35178 YDL221WYDL221W 552 nt13.48□□□□□ -0.25
RRP1P35178 RPP2AYOL039W 321 nt13.46□□□□□ -0.25
RRP1P35178 TRM9YML014W 840 nt13.45□□□□□ -0.26
RRP1P35178 CAC2YML102W 1407 nt13.43□□□□□ -0.26
RRP1P35178 SDH1YKL148C 1923 nt13.43□□□□□ -0.26
RRP1P35178 PTP1YDL230W 1008 nt13.4□□□□□ -0.26
RRP1P35178 SCC4YER147C 1875 nt13.28□□□□□ -0.28
RRP1P35178 CCT6YDR188W 1641 nt13.28□□□□□ -0.28
RRP1P35178 WWM1YFL010C 636 nt13.27□□□□□ -0.29
RRP1P35178 SUF2tP(AGG)C 72 nt13.26□□□□□ -0.29
RRP1P35178 SUF10tP(AGG)N 72 nt13.26□□□□□ -0.29
RRP1P35178 LSM3YLR438C-A 270 nt13.25□□□□□ -0.29
RRP1P35178 SIS1YNL007C 1059 nt13.24□□□□□ -0.29
RRP1P35178 IRC15YPL017C 1500 nt13.22□□□□□ -0.29
RRP1P35178 PAC11YDR488C 1602 nt13.21□□□□□ -0.3
RRP1P35178 SEC11YIR022W 504 nt13.18□□□□□ -0.3
RRP1P35178 PCH2YBR186W 1695 nt13.18□□□□□ -0.3
RRP1P35178 GIS3YLR094C 1509 nt13.17□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms