Protein–RNA interactions for Protein: Q02206

RSC4, Chromatin structure-remodeling complex subunit RSC4, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC4Q02206 YML009W-BYML009W-B 477 nt20.7■□□□□ 0.9
RSC4Q02206 NSR1YGR159C 1245 nt20.63■□□□□ 0.89
RSC4Q02206 NOP1YDL014W 984 nt20.2■□□□□ 0.82
RSC4Q02206 YKL036CYKL036C 393 nt18.58■□□□□ 0.56
RSC4Q02206 MDJ1YFL016C 1536 nt18.23■□□□□ 0.51
RSC4Q02206 Q0297Q0297 156 nt17.63■□□□□ 0.41
RSC4Q02206 SRX1YKL086W 384 nt17.6■□□□□ 0.41
RSC4Q02206 YJL027CYJL027C 417 nt17.35■□□□□ 0.37
RSC4Q02206 SCS3YGL126W 1143 nt16.85■□□□□ 0.29
RSC4Q02206 YCR051WYCR051W 669 nt16.7■□□□□ 0.26
RSC4Q02206 DBP2YNL112W 1641 nt16.12■□□□□ 0.17
RSC4Q02206 YOL085CYOL085C 342 nt16.07■□□□□ 0.16
RSC4Q02206 TRN1tP(UGG)A 72 nt15.89■□□□□ 0.13
RSC4Q02206 SUF9tP(UGG)F 72 nt15.89■□□□□ 0.13
RSC4Q02206 SUF8tP(UGG)H 72 nt15.89■□□□□ 0.13
RSC4Q02206 tP(UGG)LtP(UGG)L 72 nt15.89■□□□□ 0.13
RSC4Q02206 SUF7tP(UGG)M 72 nt15.89■□□□□ 0.13
RSC4Q02206 tP(UGG)N1tP(UGG)N1 72 nt15.89■□□□□ 0.13
RSC4Q02206 tP(UGG)N2tP(UGG)N2 72 nt15.89■□□□□ 0.13
RSC4Q02206 tP(UGG)O1tP(UGG)O1 72 nt15.89■□□□□ 0.13
RSC4Q02206 SUF11tP(UGG)O2 72 nt15.89■□□□□ 0.13
RSC4Q02206 RPP1BYDL130W 321 nt15.82■□□□□ 0.12
RSC4Q02206 PKP1YIL042C 1185 nt15.79■□□□□ 0.12
RSC4Q02206 CCC1YLR220W 969 nt15.74■□□□□ 0.11
RSC4Q02206 YBR190WYBR190W 312 nt15.62■□□□□ 0.09
RSC4Q02206 RTC3YHR087W 336 nt15.28■□□□□ 0.04
RSC4Q02206 RVS167YDR388W 1449 nt15.27■□□□□ 0.04
RSC4Q02206 ATS1YAL020C 1002 nt15.1■□□□□ 0.01
RSC4Q02206 PET122YER153C 765 nt15.07■□□□□ 0
RSC4Q02206 SCJ1YMR214W 1134 nt15.05■□□□□ -0
RSC4Q02206 tP(UGG)O3tP(UGG)O3 72 nt15.04■□□□□ -0
RSC4Q02206 SCR1SCR1 522 nt15□□□□□ -0.01
RSC4Q02206 SHR5YOL110W 714 nt14.7□□□□□ -0.06
RSC4Q02206 RRN5YLR141W 1092 nt14.66□□□□□ -0.06
RSC4Q02206 YDJ1YNL064C 1230 nt14.58□□□□□ -0.08
RSC4Q02206 Q0182Q0182 405 nt14.56□□□□□ -0.08
RSC4Q02206 SSA3YBL075C 1950 nt14.4□□□□□ -0.1
RSC4Q02206 YER088W-BYER088W-B 147 nt14.37□□□□□ -0.11
RSC4Q02206 RSB1YOR049C 1065 nt14.37□□□□□ -0.11
RSC4Q02206 MOT3YMR070W 1473 nt14.3□□□□□ -0.12
RSC4Q02206 URN1YPR152C 1398 nt14.28□□□□□ -0.12
RSC4Q02206 DEP1YAL013W 1218 nt14.24□□□□□ -0.13
RSC4Q02206 GAR1YHR089C 618 nt14.22□□□□□ -0.13
RSC4Q02206 PUT4YOR348C 1884 nt14.13□□□□□ -0.15
RSC4Q02206 RPN10YHR200W 807 nt14.13□□□□□ -0.15
RSC4Q02206 OPI9YLR338W 858 nt14.08□□□□□ -0.16
RSC4Q02206 YNL208WYNL208W 600 nt14.07□□□□□ -0.16
RSC4Q02206 PST2YDR032C 597 nt13.98□□□□□ -0.17
RSC4Q02206 SAH1YER043C 1350 nt13.96□□□□□ -0.17
RSC4Q02206 ARE1YCR048W 1833 nt13.87□□□□□ -0.19
RSC4Q02206 TIR1YER011W 765 nt13.76□□□□□ -0.21
RSC4Q02206 POA1YBR022W 534 nt13.71□□□□□ -0.21
RSC4Q02206 YHR049C-AYHR049C-A 297 nt13.7□□□□□ -0.22
RSC4Q02206 PUN1YLR414C 792 nt13.69□□□□□ -0.22
RSC4Q02206 YJR018WYJR018W 363 nt13.63□□□□□ -0.23
RSC4Q02206 SSA1YAL005C 1929 nt13.56□□□□□ -0.24
RSC4Q02206 PTC2YER089C 1395 nt13.49□□□□□ -0.25
RSC4Q02206 YKL097CYKL097C 411 nt13.44□□□□□ -0.26
RSC4Q02206 BUD23YCR047C 828 nt13.41□□□□□ -0.26
RSC4Q02206 RPP2BYDR382W 333 nt13.4□□□□□ -0.26
RSC4Q02206 BSC6YOL137W 1494 nt13.39□□□□□ -0.27
RSC4Q02206 SHU1YHL006C 453 nt13.38□□□□□ -0.27
RSC4Q02206 NAB2YGL122C 1578 nt13.35□□□□□ -0.27
RSC4Q02206 YJR120WYJR120W 351 nt13.32□□□□□ -0.28
RSC4Q02206 SRB2YHR041C 633 nt13.25□□□□□ -0.29
RSC4Q02206 INM2YDR287W 879 nt13.19□□□□□ -0.3
RSC4Q02206 YAL037C-BYAL037C-B 975 nt13.18□□□□□ -0.3
RSC4Q02206 DAL1YIR027C 1383 nt13.16□□□□□ -0.3
RSC4Q02206 WWM1YFL010C 636 nt13.12□□□□□ -0.31
RSC4Q02206 FPR4YLR449W 1179 nt13.12□□□□□ -0.31
RSC4Q02206 YGR021WYGR021W 873 nt13.11□□□□□ -0.31
RSC4Q02206 BDH2YAL061W 1254 nt13.09□□□□□ -0.31
RSC4Q02206 FIS1YIL065C 468 nt13.08□□□□□ -0.32
RSC4Q02206 YBL100CYBL100C 315 nt13.02□□□□□ -0.33
RSC4Q02206 PHO4YFR034C 939 nt13.01□□□□□ -0.33
RSC4Q02206 HOM6YJR139C 1080 nt13.01□□□□□ -0.33
RSC4Q02206 YFL021C-AYFL021C-A 855 nt12.96□□□□□ -0.33
RSC4Q02206 LSM3YLR438C-A 270 nt12.96□□□□□ -0.33
RSC4Q02206 MNP1YGL068W 585 nt12.9□□□□□ -0.34
RSC4Q02206 TRM9YML014W 840 nt12.88□□□□□ -0.35
RSC4Q02206 FUN26YAL022C 1554 nt12.86□□□□□ -0.35
RSC4Q02206 YOR139CYOR139C 393 nt12.84□□□□□ -0.35
RSC4Q02206 RKM5YLR137W 1104 nt12.83□□□□□ -0.36
RSC4Q02206 NPL3YDR432W 1245 nt12.82□□□□□ -0.36
RSC4Q02206 YOL037CYOL037C 354 nt12.77□□□□□ -0.37
RSC4Q02206 YPS1YLR120C 1710 nt12.76□□□□□ -0.37
RSC4Q02206 ALF1YNL148C 765 nt12.72□□□□□ -0.37
RSC4Q02206 CCT6YDR188W 1641 nt12.71□□□□□ -0.37
RSC4Q02206 SPT5YML010W 3192 nt12.71□□□□□ -0.38
RSC4Q02206 YDR095CYDR095C 411 nt12.67□□□□□ -0.38
RSC4Q02206 SUF2tP(AGG)C 72 nt12.66□□□□□ -0.38
RSC4Q02206 SUF10tP(AGG)N 72 nt12.66□□□□□ -0.38
RSC4Q02206 YHR165W-AYHR165W-A 312 nt12.64□□□□□ -0.39
RSC4Q02206 MEP2YNL142W 1500 nt12.59□□□□□ -0.39
RSC4Q02206 SIS1YNL007C 1059 nt12.49□□□□□ -0.41
RSC4Q02206 RPP2AYOL039W 321 nt12.47□□□□□ -0.41
RSC4Q02206 YLR281CYLR281C 468 nt12.45□□□□□ -0.42
RSC4Q02206 SSA4YER103W 1929 nt12.44□□□□□ -0.42
RSC4Q02206 WHI5YOR083W 888 nt12.41□□□□□ -0.42
RSC4Q02206 YLR154C-GYLR154C-G 150 nt12.39□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms