Protein–RNA interactions for Protein: P16862

PFK2, ATP-dependent 6-phosphofructokinase subunit beta, yeastyeast

Known RBP RIP-Chip data

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PFK2P16862 YML009W-BYML009W-B 477 nt23.84■■□□□ 1.41
PFK2P16862 NSR1YGR159C 1245 nt23.37■■□□□ 1.33
PFK2P16862 NOP1YDL014W 984 nt23.36■■□□□ 1.33
PFK2P16862 YKL036CYKL036C 393 nt22.05■■□□□ 1.12
PFK2P16862 MDJ1YFL016C 1536 nt20.82■□□□□ 0.92
PFK2P16862 YJL027CYJL027C 417 nt20.69■□□□□ 0.9
PFK2P16862 Q0297Q0297 156 nt20.64■□□□□ 0.89
PFK2P16862 SRX1YKL086W 384 nt20.43■□□□□ 0.86
PFK2P16862 SCS3YGL126W 1143 nt20.36■□□□□ 0.85
PFK2P16862 YCR051WYCR051W 669 nt19.42■□□□□ 0.7
PFK2P16862 YOL085CYOL085C 342 nt19.12■□□□□ 0.65
PFK2P16862 PKP1YIL042C 1185 nt18.77■□□□□ 0.6
PFK2P16862 SCJ1YMR214W 1134 nt18.64■□□□□ 0.57
PFK2P16862 RPP1BYDL130W 321 nt18.52■□□□□ 0.56
PFK2P16862 DBP2YNL112W 1641 nt18.4■□□□□ 0.54
PFK2P16862 ATS1YAL020C 1002 nt18.35■□□□□ 0.53
PFK2P16862 TRN1tP(UGG)A 72 nt18.18■□□□□ 0.5
PFK2P16862 SUF9tP(UGG)F 72 nt18.18■□□□□ 0.5
PFK2P16862 SUF8tP(UGG)H 72 nt18.18■□□□□ 0.5
PFK2P16862 tP(UGG)LtP(UGG)L 72 nt18.18■□□□□ 0.5
PFK2P16862 SUF7tP(UGG)M 72 nt18.18■□□□□ 0.5
PFK2P16862 tP(UGG)N1tP(UGG)N1 72 nt18.18■□□□□ 0.5
PFK2P16862 tP(UGG)N2tP(UGG)N2 72 nt18.18■□□□□ 0.5
PFK2P16862 tP(UGG)O1tP(UGG)O1 72 nt18.18■□□□□ 0.5
PFK2P16862 SUF11tP(UGG)O2 72 nt18.18■□□□□ 0.5
PFK2P16862 CCC1YLR220W 969 nt18■□□□□ 0.47
PFK2P16862 YBR190WYBR190W 312 nt17.75■□□□□ 0.43
PFK2P16862 PET122YER153C 765 nt17.65■□□□□ 0.42
PFK2P16862 SCR1SCR1 522 nt17.56■□□□□ 0.4
PFK2P16862 tP(UGG)O3tP(UGG)O3 72 nt17.37■□□□□ 0.37
PFK2P16862 RTC3YHR087W 336 nt17.35■□□□□ 0.37
PFK2P16862 RVS167YDR388W 1449 nt17.26■□□□□ 0.35
PFK2P16862 RRN5YLR141W 1092 nt17.2■□□□□ 0.34
PFK2P16862 RSB1YOR049C 1065 nt16.98■□□□□ 0.31
PFK2P16862 PST2YDR032C 597 nt16.92■□□□□ 0.3
PFK2P16862 YER088W-BYER088W-B 147 nt16.87■□□□□ 0.29
PFK2P16862 YDJ1YNL064C 1230 nt16.78■□□□□ 0.28
PFK2P16862 SHR5YOL110W 714 nt16.67■□□□□ 0.26
PFK2P16862 YKL097CYKL097C 411 nt16.49■□□□□ 0.23
PFK2P16862 GAR1YHR089C 618 nt16.35■□□□□ 0.21
PFK2P16862 URN1YPR152C 1398 nt16.24■□□□□ 0.19
PFK2P16862 DEP1YAL013W 1218 nt16.21■□□□□ 0.19
PFK2P16862 PUT4YOR348C 1884 nt16.16■□□□□ 0.18
PFK2P16862 SHU1YHL006C 453 nt16.12■□□□□ 0.17
PFK2P16862 OPI9YLR338W 858 nt16.01■□□□□ 0.15
PFK2P16862 RPN10YHR200W 807 nt15.97■□□□□ 0.15
PFK2P16862 YNL208WYNL208W 600 nt15.95■□□□□ 0.14
PFK2P16862 SAH1YER043C 1350 nt15.93■□□□□ 0.14
PFK2P16862 ARE1YCR048W 1833 nt15.86■□□□□ 0.13
PFK2P16862 YOR139CYOR139C 393 nt15.78■□□□□ 0.12
PFK2P16862 TIR1YER011W 765 nt15.77■□□□□ 0.12
PFK2P16862 YAL037C-BYAL037C-B 975 nt15.72■□□□□ 0.11
PFK2P16862 YHR049C-AYHR049C-A 297 nt15.66■□□□□ 0.1
PFK2P16862 POA1YBR022W 534 nt15.66■□□□□ 0.1
PFK2P16862 PUN1YLR414C 792 nt15.54■□□□□ 0.08
PFK2P16862 SSA1YAL005C 1929 nt15.49■□□□□ 0.07
PFK2P16862 NPL3YDR432W 1245 nt15.48■□□□□ 0.07
PFK2P16862 YJR018WYJR018W 363 nt15.48■□□□□ 0.07
PFK2P16862 SRB2YHR041C 633 nt15.38■□□□□ 0.05
PFK2P16862 PTC2YER089C 1395 nt15.36■□□□□ 0.05
PFK2P16862 BSC6YOL137W 1494 nt15.33■□□□□ 0.05
PFK2P16862 BUD23YCR047C 828 nt15.28■□□□□ 0.04
PFK2P16862 YJR120WYJR120W 351 nt15.26■□□□□ 0.03
PFK2P16862 MNP1YGL068W 585 nt15.24■□□□□ 0.03
PFK2P16862 HOM6YJR139C 1080 nt15.22■□□□□ 0.03
PFK2P16862 YGR021WYGR021W 873 nt15.21■□□□□ 0.03
PFK2P16862 WWM1YFL010C 636 nt15.18■□□□□ 0.02
PFK2P16862 NAB2YGL122C 1578 nt15.15■□□□□ 0.02
PFK2P16862 YOL037CYOL037C 354 nt15.15■□□□□ 0.02
PFK2P16862 RPP2BYDR382W 333 nt15.14■□□□□ 0.01
PFK2P16862 SSA3YBL075C 1950 nt15.14■□□□□ 0.01
PFK2P16862 tM(CAU)CtM(CAU)C 72 nt15.12■□□□□ 0.01
PFK2P16862 IMT4tM(CAU)E 72 nt15.12■□□□□ 0.01
PFK2P16862 IMT3tM(CAU)J3 72 nt15.12■□□□□ 0.01
PFK2P16862 IMT1tM(CAU)O1 72 nt15.12■□□□□ 0.01
PFK2P16862 IMT2tM(CAU)P 72 nt15.12■□□□□ 0.01
PFK2P16862 RKM5YLR137W 1104 nt14.99□□□□□ -0.01
PFK2P16862 FIS1YIL065C 468 nt14.96□□□□□ -0.01
PFK2P16862 DAL1YIR027C 1383 nt14.96□□□□□ -0.02
PFK2P16862 INM2YDR287W 879 nt14.93□□□□□ -0.02
PFK2P16862 FPR4YLR449W 1179 nt14.92□□□□□ -0.02
PFK2P16862 YFL021C-AYFL021C-A 855 nt14.9□□□□□ -0.02
PFK2P16862 BDH2YAL061W 1254 nt14.84□□□□□ -0.03
PFK2P16862 PHO4YFR034C 939 nt14.82□□□□□ -0.04
PFK2P16862 PUS2YGL063W 1113 nt14.8□□□□□ -0.04
PFK2P16862 YLR281CYLR281C 468 nt14.79□□□□□ -0.04
PFK2P16862 YBL100CYBL100C 315 nt14.78□□□□□ -0.04
PFK2P16862 MOT3YMR070W 1473 nt14.73□□□□□ -0.05
PFK2P16862 WHI5YOR083W 888 nt14.66□□□□□ -0.06
PFK2P16862 LSM3YLR438C-A 270 nt14.65□□□□□ -0.06
PFK2P16862 SPT5YML010W 3192 nt14.63□□□□□ -0.07
PFK2P16862 FUN26YAL022C 1554 nt14.61□□□□□ -0.07
PFK2P16862 TRM9YML014W 840 nt14.56□□□□□ -0.08
PFK2P16862 YPS1YLR120C 1710 nt14.55□□□□□ -0.08
PFK2P16862 YDR095CYDR095C 411 nt14.46□□□□□ -0.09
PFK2P16862 YPR011CYPR011C 981 nt14.46□□□□□ -0.09
PFK2P16862 FMP45YDL222C 930 nt14.45□□□□□ -0.1
PFK2P16862 CCT6YDR188W 1641 nt14.42□□□□□ -0.1
PFK2P16862 ALF1YNL148C 765 nt14.4□□□□□ -0.1
PFK2P16862 YHR165W-AYHR165W-A 312 nt14.39□□□□□ -0.11
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms