Protein–RNA interactions for Protein: P36094

SPC42, Spindle pole body component SPC42, yeastyeast

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC42P36094 YML009W-BYML009W-B 477 nt19■□□□□ 0.63
SPC42P36094 NSR1YGR159C 1245 nt18.87■□□□□ 0.61
SPC42P36094 NOP1YDL014W 984 nt18.48■□□□□ 0.55
SPC42P36094 MDJ1YFL016C 1536 nt17.28■□□□□ 0.36
SPC42P36094 YKL036CYKL036C 393 nt17.15■□□□□ 0.34
SPC42P36094 Q0182Q0182 405 nt16.27■□□□□ 0.2
SPC42P36094 Q0297Q0297 156 nt16.23■□□□□ 0.19
SPC42P36094 SRX1YKL086W 384 nt16.17■□□□□ 0.18
SPC42P36094 YJL027CYJL027C 417 nt16.04■□□□□ 0.16
SPC42P36094 SCS3YGL126W 1143 nt15.68■□□□□ 0.1
SPC42P36094 MOT3YMR070W 1473 nt15.62■□□□□ 0.09
SPC42P36094 YCR051WYCR051W 669 nt15.34■□□□□ 0.05
SPC42P36094 DBP2YNL112W 1641 nt15.1■□□□□ 0.01
SPC42P36094 YBR190WYBR190W 312 nt14.99□□□□□ -0.01
SPC42P36094 YOL085CYOL085C 342 nt14.87□□□□□ -0.03
SPC42P36094 SSA3YBL075C 1950 nt14.86□□□□□ -0.03
SPC42P36094 PKP1YIL042C 1185 nt14.65□□□□□ -0.06
SPC42P36094 TRN1tP(UGG)A 72 nt14.58□□□□□ -0.08
SPC42P36094 SUF9tP(UGG)F 72 nt14.58□□□□□ -0.08
SPC42P36094 SUF8tP(UGG)H 72 nt14.58□□□□□ -0.08
SPC42P36094 tP(UGG)LtP(UGG)L 72 nt14.58□□□□□ -0.08
SPC42P36094 SUF7tP(UGG)M 72 nt14.58□□□□□ -0.08
SPC42P36094 tP(UGG)N1tP(UGG)N1 72 nt14.58□□□□□ -0.08
SPC42P36094 tP(UGG)N2tP(UGG)N2 72 nt14.58□□□□□ -0.08
SPC42P36094 tP(UGG)O1tP(UGG)O1 72 nt14.58□□□□□ -0.08
SPC42P36094 SUF11tP(UGG)O2 72 nt14.58□□□□□ -0.08
SPC42P36094 RPP1BYDL130W 321 nt14.57□□□□□ -0.08
SPC42P36094 RTC3YHR087W 336 nt14.52□□□□□ -0.09
SPC42P36094 CCC1YLR220W 969 nt14.43□□□□□ -0.1
SPC42P36094 PUT4YOR348C 1884 nt14.13□□□□□ -0.15
SPC42P36094 SCJ1YMR214W 1134 nt14.11□□□□□ -0.15
SPC42P36094 ATS1YAL020C 1002 nt14.05□□□□□ -0.16
SPC42P36094 SSA1YAL005C 1929 nt14.03□□□□□ -0.16
SPC42P36094 RVS167YDR388W 1449 nt13.98□□□□□ -0.17
SPC42P36094 PET122YER153C 765 nt13.92□□□□□ -0.18
SPC42P36094 tP(UGG)O3tP(UGG)O3 72 nt13.82□□□□□ -0.2
SPC42P36094 SCR1SCR1 522 nt13.76□□□□□ -0.21
SPC42P36094 ARE1YCR048W 1833 nt13.65□□□□□ -0.22
SPC42P36094 POA1YBR022W 534 nt13.58□□□□□ -0.24
SPC42P36094 RRN5YLR141W 1092 nt13.52□□□□□ -0.25
SPC42P36094 SPT5YML010W 3192 nt13.44□□□□□ -0.26
SPC42P36094 SAH1YER043C 1350 nt13.43□□□□□ -0.26
SPC42P36094 BSC6YOL137W 1494 nt13.42□□□□□ -0.26
SPC42P36094 YHR049C-AYHR049C-A 297 nt13.42□□□□□ -0.26
SPC42P36094 SHR5YOL110W 714 nt13.4□□□□□ -0.26
SPC42P36094 URN1YPR152C 1398 nt13.38□□□□□ -0.27
SPC42P36094 OPI9YLR338W 858 nt13.38□□□□□ -0.27
SPC42P36094 YDJ1YNL064C 1230 nt13.35□□□□□ -0.27
SPC42P36094 YER088W-BYER088W-B 147 nt13.27□□□□□ -0.29
SPC42P36094 RSB1YOR049C 1065 nt13.26□□□□□ -0.29
SPC42P36094 SSA4YER103W 1929 nt13.2□□□□□ -0.3
SPC42P36094 DEP1YAL013W 1218 nt13.14□□□□□ -0.31
SPC42P36094 FPS1YLL043W 2010 nt13.06□□□□□ -0.32
SPC42P36094 GAR1YHR089C 618 nt13.05□□□□□ -0.32
SPC42P36094 RPN10YHR200W 807 nt13.04□□□□□ -0.32
SPC42P36094 BUD23YCR047C 828 nt13.02□□□□□ -0.33
SPC42P36094 PST2YDR032C 597 nt13□□□□□ -0.33
SPC42P36094 PUN1YLR414C 792 nt12.97□□□□□ -0.33
SPC42P36094 YNL208WYNL208W 600 nt12.93□□□□□ -0.34
SPC42P36094 PTC2YER089C 1395 nt12.9□□□□□ -0.34
SPC42P36094 NAB2YGL122C 1578 nt12.86□□□□□ -0.35
SPC42P36094 BDF1YLR399C 2061 nt12.82□□□□□ -0.36
SPC42P36094 YJR018WYJR018W 363 nt12.75□□□□□ -0.37
SPC42P36094 MEP2YNL142W 1500 nt12.7□□□□□ -0.38
SPC42P36094 TAT1YBR069C 1860 nt12.62□□□□□ -0.39
SPC42P36094 TIR1YER011W 765 nt12.61□□□□□ -0.39
SPC42P36094 FIS1YIL065C 468 nt12.6□□□□□ -0.39
SPC42P36094 FRE6YLL051C 2139 nt12.56□□□□□ -0.4
SPC42P36094 DAL1YIR027C 1383 nt12.55□□□□□ -0.4
SPC42P36094 RPM1RPM1 483 nt12.54□□□□□ -0.4
SPC42P36094 YKL097CYKL097C 411 nt12.51□□□□□ -0.41
SPC42P36094 DCW1YKL046C 1350 nt12.45□□□□□ -0.42
SPC42P36094 SHU1YHL006C 453 nt12.45□□□□□ -0.42
SPC42P36094 YJR120WYJR120W 351 nt12.45□□□□□ -0.42
SPC42P36094 YPS1YLR120C 1710 nt12.45□□□□□ -0.42
SPC42P36094 INM2YDR287W 879 nt12.41□□□□□ -0.42
SPC42P36094 PHO4YFR034C 939 nt12.41□□□□□ -0.42
SPC42P36094 FPR4YLR449W 1179 nt12.41□□□□□ -0.42
SPC42P36094 YBR220CYBR220C 1683 nt12.32□□□□□ -0.44
SPC42P36094 SRB2YHR041C 633 nt12.3□□□□□ -0.44
SPC42P36094 EMI2YDR516C 1503 nt12.29□□□□□ -0.44
SPC42P36094 RPP2BYDR382W 333 nt12.28□□□□□ -0.44
SPC42P36094 YHR165W-AYHR165W-A 312 nt12.28□□□□□ -0.44
SPC42P36094 YDR095CYDR095C 411 nt12.27□□□□□ -0.45
SPC42P36094 YMR090WYMR090W 684 nt12.25□□□□□ -0.45
SPC42P36094 PAC11YDR488C 1602 nt12.24□□□□□ -0.45
SPC42P36094 YAL037C-BYAL037C-B 975 nt12.24□□□□□ -0.45
SPC42P36094 NVJ2YPR091C 2313 nt12.17□□□□□ -0.46
SPC42P36094 SDH1YKL148C 1923 nt12.14□□□□□ -0.47
SPC42P36094 YDL221WYDL221W 552 nt12.14□□□□□ -0.47
SPC42P36094 YBL100CYBL100C 315 nt12.13□□□□□ -0.47
SPC42P36094 PTP1YDL230W 1008 nt12.08□□□□□ -0.48
SPC42P36094 WWM1YFL010C 636 nt12.08□□□□□ -0.48
SPC42P36094 CAC2YML102W 1407 nt12.07□□□□□ -0.48
SPC42P36094 YOR139CYOR139C 393 nt12.03□□□□□ -0.48
SPC42P36094 PCH2YBR186W 1695 nt12.03□□□□□ -0.48
SPC42P36094 RPP2AYOL039W 321 nt12.02□□□□□ -0.49
SPC42P36094 YJL225CYJL225C 5277 nt12.01□□□□□ -0.49
SPC42P36094 YGR021WYGR021W 873 nt12.01□□□□□ -0.49
SPC42P36094 HOM6YJR139C 1080 nt12.01□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms