Protein–RNA interactions for Protein: P53137

CUE3, CUE domain-containing protein 3, yeastyeast

Known RBP Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE3P53137 YML009W-BYML009W-B 477 nt22.89■■□□□ 1.25
CUE3P53137 NSR1YGR159C 1245 nt22.79■■□□□ 1.24
CUE3P53137 NOP1YDL014W 984 nt22.1■■□□□ 1.13
CUE3P53137 MDJ1YFL016C 1536 nt20.51■□□□□ 0.87
CUE3P53137 YKL036CYKL036C 393 nt20.25■□□□□ 0.83
CUE3P53137 SRX1YKL086W 384 nt19.31■□□□□ 0.68
CUE3P53137 Q0297Q0297 156 nt19.27■□□□□ 0.68
CUE3P53137 YJL027CYJL027C 417 nt18.92■□□□□ 0.62
CUE3P53137 YCR051WYCR051W 669 nt18.39■□□□□ 0.53
CUE3P53137 SCS3YGL126W 1143 nt18.37■□□□□ 0.53
CUE3P53137 DBP2YNL112W 1641 nt18.02■□□□□ 0.48
CUE3P53137 TRN1tP(UGG)A 72 nt17.56■□□□□ 0.4
CUE3P53137 SUF9tP(UGG)F 72 nt17.56■□□□□ 0.4
CUE3P53137 SUF8tP(UGG)H 72 nt17.56■□□□□ 0.4
CUE3P53137 tP(UGG)LtP(UGG)L 72 nt17.56■□□□□ 0.4
CUE3P53137 SUF7tP(UGG)M 72 nt17.56■□□□□ 0.4
CUE3P53137 tP(UGG)N1tP(UGG)N1 72 nt17.56■□□□□ 0.4
CUE3P53137 tP(UGG)N2tP(UGG)N2 72 nt17.56■□□□□ 0.4
CUE3P53137 tP(UGG)O1tP(UGG)O1 72 nt17.56■□□□□ 0.4
CUE3P53137 SUF11tP(UGG)O2 72 nt17.56■□□□□ 0.4
CUE3P53137 YOL085CYOL085C 342 nt17.56■□□□□ 0.4
CUE3P53137 CCC1YLR220W 969 nt17.49■□□□□ 0.39
CUE3P53137 YBR190WYBR190W 312 nt17.44■□□□□ 0.38
CUE3P53137 PKP1YIL042C 1185 nt17.4■□□□□ 0.38
CUE3P53137 RPP1BYDL130W 321 nt17.32■□□□□ 0.36
CUE3P53137 RTC3YHR087W 336 nt17.14■□□□□ 0.33
CUE3P53137 RVS167YDR388W 1449 nt16.9■□□□□ 0.3
CUE3P53137 SCJ1YMR214W 1134 nt16.82■□□□□ 0.28
CUE3P53137 PET122YER153C 765 nt16.61■□□□□ 0.25
CUE3P53137 tP(UGG)O3tP(UGG)O3 72 nt16.58■□□□□ 0.24
CUE3P53137 ATS1YAL020C 1002 nt16.36■□□□□ 0.21
CUE3P53137 SCR1SCR1 522 nt16.36■□□□□ 0.21
CUE3P53137 SHR5YOL110W 714 nt16.25■□□□□ 0.19
CUE3P53137 RRN5YLR141W 1092 nt16.11■□□□□ 0.17
CUE3P53137 YDJ1YNL064C 1230 nt15.99■□□□□ 0.15
CUE3P53137 PUT4YOR348C 1884 nt15.99■□□□□ 0.15
CUE3P53137 DEP1YAL013W 1218 nt15.96■□□□□ 0.15
CUE3P53137 URN1YPR152C 1398 nt15.96■□□□□ 0.15
CUE3P53137 YER088W-BYER088W-B 147 nt15.78■□□□□ 0.12
CUE3P53137 GAR1YHR089C 618 nt15.76■□□□□ 0.11
CUE3P53137 RSB1YOR049C 1065 nt15.75■□□□□ 0.11
CUE3P53137 SAH1YER043C 1350 nt15.72■□□□□ 0.11
CUE3P53137 OPI9YLR338W 858 nt15.71■□□□□ 0.11
CUE3P53137 ARE1YCR048W 1833 nt15.66■□□□□ 0.1
CUE3P53137 RPN10YHR200W 807 nt15.63■□□□□ 0.09
CUE3P53137 YNL208WYNL208W 600 nt15.59■□□□□ 0.09
CUE3P53137 POA1YBR022W 534 nt15.52■□□□□ 0.08
CUE3P53137 YHR049C-AYHR049C-A 297 nt15.49■□□□□ 0.07
CUE3P53137 SSA3YBL075C 1950 nt15.27■□□□□ 0.04
CUE3P53137 PUN1YLR414C 792 nt15.24■□□□□ 0.03
CUE3P53137 TIR1YER011W 765 nt15.21■□□□□ 0.03
CUE3P53137 YJR018WYJR018W 363 nt15.2■□□□□ 0.02
CUE3P53137 BSC6YOL137W 1494 nt15.2■□□□□ 0.02
CUE3P53137 PST2YDR032C 597 nt15.17■□□□□ 0.02
CUE3P53137 BUD23YCR047C 828 nt15.16■□□□□ 0.02
CUE3P53137 PTC2YER089C 1395 nt15.14■□□□□ 0.01
CUE3P53137 SSA1YAL005C 1929 nt15.07■□□□□ 0
CUE3P53137 NAB2YGL122C 1578 nt14.93□□□□□ -0.02
CUE3P53137 YJR120WYJR120W 351 nt14.92□□□□□ -0.02
CUE3P53137 RPP2BYDR382W 333 nt14.83□□□□□ -0.04
CUE3P53137 SRB2YHR041C 633 nt14.82□□□□□ -0.04
CUE3P53137 FPR4YLR449W 1179 nt14.76□□□□□ -0.05
CUE3P53137 FIS1YIL065C 468 nt14.71□□□□□ -0.05
CUE3P53137 DAL1YIR027C 1383 nt14.71□□□□□ -0.06
CUE3P53137 SHU1YHL006C 453 nt14.64□□□□□ -0.07
CUE3P53137 INM2YDR287W 879 nt14.63□□□□□ -0.07
CUE3P53137 YKL097CYKL097C 411 nt14.6□□□□□ -0.07
CUE3P53137 PHO4YFR034C 939 nt14.58□□□□□ -0.08
CUE3P53137 WWM1YFL010C 636 nt14.54□□□□□ -0.08
CUE3P53137 YAL037C-BYAL037C-B 975 nt14.53□□□□□ -0.08
CUE3P53137 SPT5YML010W 3192 nt14.52□□□□□ -0.09
CUE3P53137 YBL100CYBL100C 315 nt14.51□□□□□ -0.09
CUE3P53137 BDH2YAL061W 1254 nt14.49□□□□□ -0.09
CUE3P53137 YPS1YLR120C 1710 nt14.34□□□□□ -0.11
CUE3P53137 FUN26YAL022C 1554 nt14.34□□□□□ -0.11
CUE3P53137 YGR021WYGR021W 873 nt14.33□□□□□ -0.12
CUE3P53137 HOM6YJR139C 1080 nt14.29□□□□□ -0.12
CUE3P53137 MNP1YGL068W 585 nt14.27□□□□□ -0.13
CUE3P53137 TRM9YML014W 840 nt14.27□□□□□ -0.13
CUE3P53137 MEP2YNL142W 1500 nt14.25□□□□□ -0.13
CUE3P53137 YFL021C-AYFL021C-A 855 nt14.24□□□□□ -0.13
CUE3P53137 YHR165W-AYHR165W-A 312 nt14.24□□□□□ -0.13
CUE3P53137 LSM3YLR438C-A 270 nt14.24□□□□□ -0.13
CUE3P53137 YDR095CYDR095C 411 nt14.21□□□□□ -0.13
CUE3P53137 ALF1YNL148C 765 nt14.18□□□□□ -0.14
CUE3P53137 SSA4YER103W 1929 nt14.11□□□□□ -0.15
CUE3P53137 CCT6YDR188W 1641 nt14.1□□□□□ -0.15
CUE3P53137 RKM5YLR137W 1104 nt14.09□□□□□ -0.15
CUE3P53137 DCW1YKL046C 1350 nt14.09□□□□□ -0.15
CUE3P53137 SUF2tP(AGG)C 72 nt13.99□□□□□ -0.17
CUE3P53137 SUF10tP(AGG)N 72 nt13.99□□□□□ -0.17
CUE3P53137 YOR139CYOR139C 393 nt13.97□□□□□ -0.17
CUE3P53137 RPP2AYOL039W 321 nt13.96□□□□□ -0.17
CUE3P53137 PTP1YDL230W 1008 nt13.92□□□□□ -0.18
CUE3P53137 SIS1YNL007C 1059 nt13.92□□□□□ -0.18
CUE3P53137 NPL3YDR432W 1245 nt13.89□□□□□ -0.19
CUE3P53137 CAC2YML102W 1407 nt13.88□□□□□ -0.19
CUE3P53137 EMI2YDR516C 1503 nt13.87□□□□□ -0.19
CUE3P53137 YOL037CYOL037C 354 nt13.87□□□□□ -0.19
CUE3P53137 ART5YGR068C 1761 nt13.78□□□□□ -0.2
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms