Protein–RNA interactions for Protein: P39073

SSN3, Meiotic mRNA stability protein kinase SSN3, yeastyeast

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN3P39073 YML009W-BYML009W-B 477 nt20.19■□□□□ 0.82
SSN3P39073 NSR1YGR159C 1245 nt20.06■□□□□ 0.8
SSN3P39073 NOP1YDL014W 984 nt19.66■□□□□ 0.74
SSN3P39073 YKL036CYKL036C 393 nt18.14■□□□□ 0.49
SSN3P39073 MDJ1YFL016C 1536 nt17.77■□□□□ 0.43
SSN3P39073 Q0297Q0297 156 nt17.19■□□□□ 0.34
SSN3P39073 SRX1YKL086W 384 nt17.16■□□□□ 0.34
SSN3P39073 YJL027CYJL027C 417 nt16.94■□□□□ 0.3
SSN3P39073 SCS3YGL126W 1143 nt16.49■□□□□ 0.23
SSN3P39073 YCR051WYCR051W 669 nt16.29■□□□□ 0.2
SSN3P39073 DBP2YNL112W 1641 nt15.72■□□□□ 0.11
SSN3P39073 YOL085CYOL085C 342 nt15.7■□□□□ 0.1
SSN3P39073 TRN1tP(UGG)A 72 nt15.49■□□□□ 0.07
SSN3P39073 SUF9tP(UGG)F 72 nt15.49■□□□□ 0.07
SSN3P39073 SUF8tP(UGG)H 72 nt15.49■□□□□ 0.07
SSN3P39073 tP(UGG)LtP(UGG)L 72 nt15.49■□□□□ 0.07
SSN3P39073 SUF7tP(UGG)M 72 nt15.49■□□□□ 0.07
SSN3P39073 tP(UGG)N1tP(UGG)N1 72 nt15.49■□□□□ 0.07
SSN3P39073 tP(UGG)N2tP(UGG)N2 72 nt15.49■□□□□ 0.07
SSN3P39073 tP(UGG)O1tP(UGG)O1 72 nt15.49■□□□□ 0.07
SSN3P39073 SUF11tP(UGG)O2 72 nt15.49■□□□□ 0.07
SSN3P39073 PKP1YIL042C 1185 nt15.46■□□□□ 0.07
SSN3P39073 RPP1BYDL130W 321 nt15.43■□□□□ 0.06
SSN3P39073 CCC1YLR220W 969 nt15.35■□□□□ 0.05
SSN3P39073 YBR190WYBR190W 312 nt15.17■□□□□ 0.02
SSN3P39073 RTC3YHR087W 336 nt14.85□□□□□ -0.03
SSN3P39073 RVS167YDR388W 1449 nt14.83□□□□□ -0.03
SSN3P39073 ATS1YAL020C 1002 nt14.76□□□□□ -0.05
SSN3P39073 PET122YER153C 765 nt14.73□□□□□ -0.05
SSN3P39073 SCJ1YMR214W 1134 nt14.71□□□□□ -0.05
SSN3P39073 tP(UGG)O3tP(UGG)O3 72 nt14.67□□□□□ -0.06
SSN3P39073 SCR1SCR1 522 nt14.61□□□□□ -0.07
SSN3P39073 RRN5YLR141W 1092 nt14.31□□□□□ -0.12
SSN3P39073 SHR5YOL110W 714 nt14.31□□□□□ -0.12
SSN3P39073 YDJ1YNL064C 1230 nt14.2□□□□□ -0.14
SSN3P39073 YER088W-BYER088W-B 147 nt14.03□□□□□ -0.16
SSN3P39073 RSB1YOR049C 1065 nt14.03□□□□□ -0.16
SSN3P39073 URN1YPR152C 1398 nt13.89□□□□□ -0.19
SSN3P39073 GAR1YHR089C 618 nt13.88□□□□□ -0.19
SSN3P39073 DEP1YAL013W 1218 nt13.88□□□□□ -0.19
SSN3P39073 PUT4YOR348C 1884 nt13.73□□□□□ -0.21
SSN3P39073 RPN10YHR200W 807 nt13.72□□□□□ -0.21
SSN3P39073 YNL208WYNL208W 600 nt13.69□□□□□ -0.22
SSN3P39073 OPI9YLR338W 858 nt13.68□□□□□ -0.22
SSN3P39073 Q0182Q0182 405 nt13.67□□□□□ -0.22
SSN3P39073 PST2YDR032C 597 nt13.66□□□□□ -0.22
SSN3P39073 MOT3YMR070W 1473 nt13.62□□□□□ -0.23
SSN3P39073 SAH1YER043C 1350 nt13.58□□□□□ -0.23
SSN3P39073 ARE1YCR048W 1833 nt13.5□□□□□ -0.25
SSN3P39073 TIR1YER011W 765 nt13.41□□□□□ -0.26
SSN3P39073 YHR049C-AYHR049C-A 297 nt13.33□□□□□ -0.28
SSN3P39073 POA1YBR022W 534 nt13.33□□□□□ -0.28
SSN3P39073 PUN1YLR414C 792 nt13.3□□□□□ -0.28
SSN3P39073 YJR018WYJR018W 363 nt13.26□□□□□ -0.29
SSN3P39073 SSA1YAL005C 1929 nt13.23□□□□□ -0.29
SSN3P39073 YKL097CYKL097C 411 nt13.15□□□□□ -0.3
SSN3P39073 PTC2YER089C 1395 nt13.12□□□□□ -0.31
SSN3P39073 SHU1YHL006C 453 nt13.1□□□□□ -0.31
SSN3P39073 YGR139WYGR139W 339 nt13.06□□□□□ -0.32
SSN3P39073 BUD23YCR047C 828 nt13.04□□□□□ -0.32
SSN3P39073 BSC6YOL137W 1494 nt13.03□□□□□ -0.32
SSN3P39073 RPP2BYDR382W 333 nt13.02□□□□□ -0.33
SSN3P39073 YJR120WYJR120W 351 nt13.01□□□□□ -0.33
SSN3P39073 SRB2YHR041C 633 nt12.97□□□□□ -0.33
SSN3P39073 NAB2YGL122C 1578 nt12.96□□□□□ -0.33
SSN3P39073 YAL037C-BYAL037C-B 975 nt12.9□□□□□ -0.34
SSN3P39073 WWM1YFL010C 636 nt12.81□□□□□ -0.36
SSN3P39073 INM2YDR287W 879 nt12.79□□□□□ -0.36
SSN3P39073 DAL1YIR027C 1383 nt12.79□□□□□ -0.36
SSN3P39073 YGR021WYGR021W 873 nt12.77□□□□□ -0.37
SSN3P39073 FPR4YLR449W 1179 nt12.77□□□□□ -0.37
SSN3P39073 FIS1YIL065C 468 nt12.74□□□□□ -0.37
SSN3P39073 BDH2YAL061W 1254 nt12.74□□□□□ -0.37
SSN3P39073 HOM6YJR139C 1080 nt12.7□□□□□ -0.38
SSN3P39073 SSA3YBL075C 1950 nt12.69□□□□□ -0.38
SSN3P39073 YBL100CYBL100C 315 nt12.67□□□□□ -0.38
SSN3P39073 PHO4YFR034C 939 nt12.66□□□□□ -0.38
SSN3P39073 MNP1YGL068W 585 nt12.63□□□□□ -0.39
SSN3P39073 YFL021C-AYFL021C-A 855 nt12.62□□□□□ -0.39
SSN3P39073 LSM3YLR438C-A 270 nt12.59□□□□□ -0.39
SSN3P39073 YOR139CYOR139C 393 nt12.59□□□□□ -0.39
SSN3P39073 NME1NME1 340 nt12.57□□□□□ -0.4
SSN3P39073 NPL3YDR432W 1245 nt12.52□□□□□ -0.41
SSN3P39073 RKM5YLR137W 1104 nt12.52□□□□□ -0.41
SSN3P39073 TRM9YML014W 840 nt12.52□□□□□ -0.41
SSN3P39073 FUN26YAL022C 1554 nt12.52□□□□□ -0.41
SSN3P39073 YOL037CYOL037C 354 nt12.46□□□□□ -0.41
SSN3P39073 YPS1YLR120C 1710 nt12.4□□□□□ -0.43
SSN3P39073 CCT6YDR188W 1641 nt12.37□□□□□ -0.43
SSN3P39073 ALF1YNL148C 765 nt12.35□□□□□ -0.43
SSN3P39073 SPT5YML010W 3192 nt12.34□□□□□ -0.43
SSN3P39073 YDR095CYDR095C 411 nt12.33□□□□□ -0.44
SSN3P39073 SUF2tP(AGG)C 72 nt12.29□□□□□ -0.44
SSN3P39073 SUF10tP(AGG)N 72 nt12.29□□□□□ -0.44
SSN3P39073 YHR165W-AYHR165W-A 312 nt12.28□□□□□ -0.44
SSN3P39073 MEP2YNL142W 1500 nt12.22□□□□□ -0.45
SSN3P39073 YLR281CYLR281C 468 nt12.16□□□□□ -0.46
SSN3P39073 SIS1YNL007C 1059 nt12.14□□□□□ -0.47
SSN3P39073 tM(CAU)CtM(CAU)C 72 nt12.12□□□□□ -0.47
SSN3P39073 IMT4tM(CAU)E 72 nt12.12□□□□□ -0.47
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms