Protein–RNA interactions for Protein: P38708

YHR020W, Putative proline--tRNA ligase YHR020W, yeastyeast

Known RBP Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YHR020WP38708 YML009W-BYML009W-B 477 nt20.15■□□□□ 0.82
YHR020WP38708 NSR1YGR159C 1245 nt20.01■□□□□ 0.79
YHR020WP38708 NOP1YDL014W 984 nt19.57■□□□□ 0.72
YHR020WP38708 YKL036CYKL036C 393 nt18.05■□□□□ 0.48
YHR020WP38708 MDJ1YFL016C 1536 nt17.79■□□□□ 0.44
YHR020WP38708 Q0297Q0297 156 nt17.11■□□□□ 0.33
YHR020WP38708 SRX1YKL086W 384 nt17.09■□□□□ 0.33
YHR020WP38708 YJL027CYJL027C 417 nt16.87■□□□□ 0.29
YHR020WP38708 SCS3YGL126W 1143 nt16.42■□□□□ 0.22
YHR020WP38708 YCR051WYCR051W 669 nt16.25■□□□□ 0.19
YHR020WP38708 DBP2YNL112W 1641 nt15.72■□□□□ 0.11
YHR020WP38708 YOL085CYOL085C 342 nt15.64■□□□□ 0.09
YHR020WP38708 TRN1tP(UGG)A 72 nt15.46■□□□□ 0.07
YHR020WP38708 SUF9tP(UGG)F 72 nt15.46■□□□□ 0.07
YHR020WP38708 SUF8tP(UGG)H 72 nt15.46■□□□□ 0.07
YHR020WP38708 tP(UGG)LtP(UGG)L 72 nt15.46■□□□□ 0.07
YHR020WP38708 SUF7tP(UGG)M 72 nt15.46■□□□□ 0.07
YHR020WP38708 tP(UGG)N1tP(UGG)N1 72 nt15.46■□□□□ 0.07
YHR020WP38708 tP(UGG)N2tP(UGG)N2 72 nt15.46■□□□□ 0.07
YHR020WP38708 tP(UGG)O1tP(UGG)O1 72 nt15.46■□□□□ 0.07
YHR020WP38708 SUF11tP(UGG)O2 72 nt15.46■□□□□ 0.07
YHR020WP38708 PKP1YIL042C 1185 nt15.44■□□□□ 0.06
YHR020WP38708 RPP1BYDL130W 321 nt15.37■□□□□ 0.05
YHR020WP38708 CCC1YLR220W 969 nt15.35■□□□□ 0.05
YHR020WP38708 YBR190WYBR190W 312 nt15.15■□□□□ 0.02
YHR020WP38708 SSA3YBL075C 1950 nt14.88□□□□□ -0.03
YHR020WP38708 RTC3YHR087W 336 nt14.85□□□□□ -0.03
YHR020WP38708 RVS167YDR388W 1449 nt14.79□□□□□ -0.04
YHR020WP38708 SCJ1YMR214W 1134 nt14.71□□□□□ -0.05
YHR020WP38708 PET122YER153C 765 nt14.7□□□□□ -0.06
YHR020WP38708 ATS1YAL020C 1002 nt14.69□□□□□ -0.06
YHR020WP38708 Q0182Q0182 405 nt14.68□□□□□ -0.06
YHR020WP38708 tP(UGG)O3tP(UGG)O3 72 nt14.63□□□□□ -0.07
YHR020WP38708 SCR1SCR1 522 nt14.54□□□□□ -0.08
YHR020WP38708 MOT3YMR070W 1473 nt14.31□□□□□ -0.12
YHR020WP38708 RRN5YLR141W 1092 nt14.29□□□□□ -0.12
YHR020WP38708 SHR5YOL110W 714 nt14.27□□□□□ -0.13
YHR020WP38708 YDJ1YNL064C 1230 nt14.14□□□□□ -0.15
YHR020WP38708 YER088W-BYER088W-B 147 nt13.99□□□□□ -0.17
YHR020WP38708 RSB1YOR049C 1065 nt13.99□□□□□ -0.17
YHR020WP38708 DEP1YAL013W 1218 nt13.9□□□□□ -0.18
YHR020WP38708 URN1YPR152C 1398 nt13.88□□□□□ -0.19
YHR020WP38708 GAR1YHR089C 618 nt13.87□□□□□ -0.19
YHR020WP38708 PUT4YOR348C 1884 nt13.76□□□□□ -0.21
YHR020WP38708 RPN10YHR200W 807 nt13.66□□□□□ -0.22
YHR020WP38708 OPI9YLR338W 858 nt13.66□□□□□ -0.22
YHR020WP38708 YNL208WYNL208W 600 nt13.65□□□□□ -0.22
YHR020WP38708 SAH1YER043C 1350 nt13.6□□□□□ -0.23
YHR020WP38708 PST2YDR032C 597 nt13.6□□□□□ -0.23
YHR020WP38708 ARE1YCR048W 1833 nt13.52□□□□□ -0.25
YHR020WP38708 TIR1YER011W 765 nt13.39□□□□□ -0.27
YHR020WP38708 POA1YBR022W 534 nt13.36□□□□□ -0.27
YHR020WP38708 YHR049C-AYHR049C-A 297 nt13.35□□□□□ -0.27
YHR020WP38708 PUN1YLR414C 792 nt13.27□□□□□ -0.29
YHR020WP38708 YJR018WYJR018W 363 nt13.24□□□□□ -0.29
YHR020WP38708 SSA1YAL005C 1929 nt13.23□□□□□ -0.29
YHR020WP38708 PTC2YER089C 1395 nt13.14□□□□□ -0.31
YHR020WP38708 YKL097CYKL097C 411 nt13.07□□□□□ -0.32
YHR020WP38708 BUD23YCR047C 828 nt13.06□□□□□ -0.32
YHR020WP38708 SHU1YHL006C 453 nt13.06□□□□□ -0.32
YHR020WP38708 BSC6YOL137W 1494 nt13.05□□□□□ -0.32
YHR020WP38708 YJR120WYJR120W 351 nt13.02□□□□□ -0.33
YHR020WP38708 SRB2YHR041C 633 nt13.01□□□□□ -0.33
YHR020WP38708 RPP2BYDR382W 333 nt12.98□□□□□ -0.33
YHR020WP38708 NAB2YGL122C 1578 nt12.94□□□□□ -0.34
YHR020WP38708 YAL037C-BYAL037C-B 975 nt12.89□□□□□ -0.35
YHR020WP38708 WWM1YFL010C 636 nt12.8□□□□□ -0.36
YHR020WP38708 FPR4YLR449W 1179 nt12.79□□□□□ -0.36
YHR020WP38708 DAL1YIR027C 1383 nt12.78□□□□□ -0.36
YHR020WP38708 INM2YDR287W 879 nt12.76□□□□□ -0.37
YHR020WP38708 FIS1YIL065C 468 nt12.75□□□□□ -0.37
YHR020WP38708 BDH2YAL061W 1254 nt12.71□□□□□ -0.37
YHR020WP38708 YGR021WYGR021W 873 nt12.7□□□□□ -0.38
YHR020WP38708 HOM6YJR139C 1080 nt12.66□□□□□ -0.38
YHR020WP38708 SSA4YER103W 1929 nt12.65□□□□□ -0.38
YHR020WP38708 PHO4YFR034C 939 nt12.65□□□□□ -0.38
YHR020WP38708 YBL100CYBL100C 315 nt12.65□□□□□ -0.38
YHR020WP38708 MNP1YGL068W 585 nt12.62□□□□□ -0.39
YHR020WP38708 PAC11YDR488C 1602 nt12.6□□□□□ -0.39
YHR020WP38708 YFL021C-AYFL021C-A 855 nt12.57□□□□□ -0.4
YHR020WP38708 YOR139CYOR139C 393 nt12.54□□□□□ -0.4
YHR020WP38708 LSM3YLR438C-A 270 nt12.53□□□□□ -0.4
YHR020WP38708 SPT5YML010W 3192 nt12.51□□□□□ -0.41
YHR020WP38708 FUN26YAL022C 1554 nt12.5□□□□□ -0.41
YHR020WP38708 TRM9YML014W 840 nt12.49□□□□□ -0.41
YHR020WP38708 NVJ2YPR091C 2313 nt12.48□□□□□ -0.41
YHR020WP38708 RKM5YLR137W 1104 nt12.48□□□□□ -0.41
YHR020WP38708 NPL3YDR432W 1245 nt12.45□□□□□ -0.42
YHR020WP38708 YPS1YLR120C 1710 nt12.4□□□□□ -0.43
YHR020WP38708 YOL037CYOL037C 354 nt12.38□□□□□ -0.43
YHR020WP38708 ALF1YNL148C 765 nt12.34□□□□□ -0.43
YHR020WP38708 CCT6YDR188W 1641 nt12.33□□□□□ -0.43
YHR020WP38708 BDF1YLR399C 2061 nt12.33□□□□□ -0.44
YHR020WP38708 YDR095CYDR095C 411 nt12.32□□□□□ -0.44
YHR020WP38708 YHR165W-AYHR165W-A 312 nt12.29□□□□□ -0.44
YHR020WP38708 MEP2YNL142W 1500 nt12.24□□□□□ -0.45
YHR020WP38708 SUF2tP(AGG)C 72 nt12.23□□□□□ -0.45
YHR020WP38708 SUF10tP(AGG)N 72 nt12.23□□□□□ -0.45
YHR020WP38708 FPS1YLL043W 2010 nt12.16□□□□□ -0.46
YHR020WP38708 TAT1YBR069C 1860 nt12.14□□□□□ -0.47
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms