Protein–RNA interactions for Protein: P39002

FAA3, Long-chain-fatty-acid--CoA ligase 3, yeastyeast

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FAA3P39002 YML009W-BYML009W-B 477 nt19.75■□□□□ 0.75
FAA3P39002 NOP1YDL014W 984 nt19.6■□□□□ 0.73
FAA3P39002 NSR1YGR159C 1245 nt19.11■□□□□ 0.65
FAA3P39002 YKL036CYKL036C 393 nt18.6■□□□□ 0.57
FAA3P39002 YJL027CYJL027C 417 nt17.48■□□□□ 0.39
FAA3P39002 Q0297Q0297 156 nt17.25■□□□□ 0.35
FAA3P39002 SCS3YGL126W 1143 nt17.16■□□□□ 0.34
FAA3P39002 SRX1YKL086W 384 nt17.03■□□□□ 0.32
FAA3P39002 MDJ1YFL016C 1536 nt16.26■□□□□ 0.19
FAA3P39002 YCR051WYCR051W 669 nt16.21■□□□□ 0.19
FAA3P39002 SCJ1YMR214W 1134 nt16.16■□□□□ 0.18
FAA3P39002 YOL085CYOL085C 342 nt16.01■□□□□ 0.15
FAA3P39002 PKP1YIL042C 1185 nt15.64■□□□□ 0.09
FAA3P39002 ATS1YAL020C 1002 nt15.54■□□□□ 0.08
FAA3P39002 RPP1BYDL130W 321 nt15.49■□□□□ 0.07
FAA3P39002 TRN1tP(UGG)A 72 nt14.97□□□□□ -0.01
FAA3P39002 SUF9tP(UGG)F 72 nt14.97□□□□□ -0.01
FAA3P39002 SUF8tP(UGG)H 72 nt14.97□□□□□ -0.01
FAA3P39002 tP(UGG)LtP(UGG)L 72 nt14.97□□□□□ -0.01
FAA3P39002 SUF7tP(UGG)M 72 nt14.97□□□□□ -0.01
FAA3P39002 tP(UGG)N1tP(UGG)N1 72 nt14.97□□□□□ -0.01
FAA3P39002 tP(UGG)N2tP(UGG)N2 72 nt14.97□□□□□ -0.01
FAA3P39002 tP(UGG)O1tP(UGG)O1 72 nt14.97□□□□□ -0.01
FAA3P39002 SUF11tP(UGG)O2 72 nt14.97□□□□□ -0.01
FAA3P39002 SCR1SCR1 522 nt14.85□□□□□ -0.03
FAA3P39002 CCC1YLR220W 969 nt14.81□□□□□ -0.04
FAA3P39002 Q0182Q0182 405 nt14.67□□□□□ -0.06
FAA3P39002 PET122YER153C 765 nt14.64□□□□□ -0.07
FAA3P39002 RTC3YHR087W 336 nt14.58□□□□□ -0.08
FAA3P39002 DBP2YNL112W 1641 nt14.52□□□□□ -0.08
FAA3P39002 MOT3YMR070W 1473 nt14.43□□□□□ -0.1
FAA3P39002 tP(UGG)O3tP(UGG)O3 72 nt14.37□□□□□ -0.11
FAA3P39002 RRN5YLR141W 1092 nt14.3□□□□□ -0.12
FAA3P39002 RSB1YOR049C 1065 nt14.27□□□□□ -0.13
FAA3P39002 PST2YDR032C 597 nt14.24□□□□□ -0.13
FAA3P39002 YKL097CYKL097C 411 nt14.14□□□□□ -0.15
FAA3P39002 RVS167YDR388W 1449 nt14.12□□□□□ -0.15
FAA3P39002 YER088W-BYER088W-B 147 nt14.01□□□□□ -0.17
FAA3P39002 YDJ1YNL064C 1230 nt13.97□□□□□ -0.17
FAA3P39002 YBR190WYBR190W 312 nt13.91□□□□□ -0.18
FAA3P39002 SHR5YOL110W 714 nt13.68□□□□□ -0.22
FAA3P39002 SHU1YHL006C 453 nt13.49□□□□□ -0.25
FAA3P39002 GAR1YHR089C 618 nt13.48□□□□□ -0.25
FAA3P39002 YOR139CYOR139C 393 nt13.29□□□□□ -0.28
FAA3P39002 NPL3YDR432W 1245 nt13.23□□□□□ -0.29
FAA3P39002 YAL037C-BYAL037C-B 975 nt13.03□□□□□ -0.32
FAA3P39002 TIR1YER011W 765 nt13.02□□□□□ -0.33
FAA3P39002 RPN10YHR200W 807 nt12.99□□□□□ -0.33
FAA3P39002 DEP1YAL013W 1218 nt12.97□□□□□ -0.33
FAA3P39002 YNL208WYNL208W 600 nt12.96□□□□□ -0.33
FAA3P39002 SSA3YBL075C 1950 nt12.89□□□□□ -0.35
FAA3P39002 PUT4YOR348C 1884 nt12.87□□□□□ -0.35
FAA3P39002 YOL037CYOL037C 354 nt12.85□□□□□ -0.35
FAA3P39002 URN1YPR152C 1398 nt12.84□□□□□ -0.35
FAA3P39002 YGR021WYGR021W 873 nt12.8□□□□□ -0.36
FAA3P39002 BSC6YOL137W 1494 nt12.77□□□□□ -0.37
FAA3P39002 tM(CAU)CtM(CAU)C 72 nt12.75□□□□□ -0.37
FAA3P39002 IMT4tM(CAU)E 72 nt12.75□□□□□ -0.37
FAA3P39002 IMT3tM(CAU)J3 72 nt12.75□□□□□ -0.37
FAA3P39002 IMT1tM(CAU)O1 72 nt12.75□□□□□ -0.37
FAA3P39002 IMT2tM(CAU)P 72 nt12.75□□□□□ -0.37
FAA3P39002 HOM6YJR139C 1080 nt12.64□□□□□ -0.39
FAA3P39002 SSA1YAL005C 1929 nt12.62□□□□□ -0.39
FAA3P39002 MNP1YGL068W 585 nt12.61□□□□□ -0.39
FAA3P39002 ARE1YCR048W 1833 nt12.54□□□□□ -0.4
FAA3P39002 OPI9YLR338W 858 nt12.54□□□□□ -0.4
FAA3P39002 POA1YBR022W 534 nt12.53□□□□□ -0.4
FAA3P39002 SAH1YER043C 1350 nt12.53□□□□□ -0.4
FAA3P39002 WWM1YFL010C 636 nt12.49□□□□□ -0.41
FAA3P39002 PUS2YGL063W 1113 nt12.48□□□□□ -0.41
FAA3P39002 RKM5YLR137W 1104 nt12.48□□□□□ -0.41
FAA3P39002 YHR049C-AYHR049C-A 297 nt12.46□□□□□ -0.41
FAA3P39002 MRPL8YJL063C 717 nt12.42□□□□□ -0.42
FAA3P39002 YFL021C-AYFL021C-A 855 nt12.41□□□□□ -0.42
FAA3P39002 RPP2BYDR382W 333 nt12.38□□□□□ -0.43
FAA3P39002 SRB2YHR041C 633 nt12.37□□□□□ -0.43
FAA3P39002 YLR281CYLR281C 468 nt12.37□□□□□ -0.43
FAA3P39002 YJR018WYJR018W 363 nt12.33□□□□□ -0.44
FAA3P39002 PUN1YLR414C 792 nt12.27□□□□□ -0.45
FAA3P39002 WHI5YOR083W 888 nt12.25□□□□□ -0.45
FAA3P39002 ADO1YJR105W 1023 nt12.23□□□□□ -0.45
FAA3P39002 BUD23YCR047C 828 nt12.21□□□□□ -0.45
FAA3P39002 FMP45YDL222C 930 nt12.18□□□□□ -0.46
FAA3P39002 IMP2'YIL154C 1041 nt12.16□□□□□ -0.46
FAA3P39002 BDH2YAL061W 1254 nt12.14□□□□□ -0.47
FAA3P39002 LSM3YLR438C-A 270 nt12.14□□□□□ -0.47
FAA3P39002 YCH1YGR203W 447 nt12.13□□□□□ -0.47
FAA3P39002 NME1NME1 340 nt12.13□□□□□ -0.47
FAA3P39002 DSK2YMR276W 1122 nt12.11□□□□□ -0.47
FAA3P39002 YJR120WYJR120W 351 nt12.08□□□□□ -0.48
FAA3P39002 PTC2YER089C 1395 nt12.07□□□□□ -0.48
FAA3P39002 UBX6YJL048C 1191 nt12.01□□□□□ -0.49
FAA3P39002 YEL076C-AYEL076C-A 651 nt11.98□□□□□ -0.49
FAA3P39002 YEL076CYEL076C 651 nt11.98□□□□□ -0.49
FAA3P39002 YLR464WYLR464W 651 nt11.98□□□□□ -0.49
FAA3P39002 NAB2YGL122C 1578 nt11.94□□□□□ -0.5
FAA3P39002 YLR236CYLR236C 324 nt11.89□□□□□ -0.51
FAA3P39002 INM2YDR287W 879 nt11.88□□□□□ -0.51
FAA3P39002 YPR011CYPR011C 981 nt11.88□□□□□ -0.51
FAA3P39002 TRM9YML014W 840 nt11.84□□□□□ -0.51
Retrieved 100 of 7,029 protein–RNA pairs in 6.7 ms