Protein–RNA interactions for Protein: P51979

HFM1, ATP-dependent DNA helicase MER3, yeastyeast

Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HFM1P51979 YML009W-BYML009W-B 477 nt22.03■■□□□ 1.12
HFM1P51979 NSR1YGR159C 1245 nt22.02■■□□□ 1.12
HFM1P51979 NOP1YDL014W 984 nt21.18■□□□□ 0.98
HFM1P51979 MDJ1YFL016C 1536 nt19.95■□□□□ 0.78
HFM1P51979 YKL036CYKL036C 393 nt19.38■□□□□ 0.69
HFM1P51979 SRX1YKL086W 384 nt18.56■□□□□ 0.56
HFM1P51979 Q0297Q0297 156 nt18.51■□□□□ 0.55
HFM1P51979 YJL027CYJL027C 417 nt18.28■□□□□ 0.52
HFM1P51979 SCS3YGL126W 1143 nt17.65■□□□□ 0.42
HFM1P51979 YCR051WYCR051W 669 nt17.64■□□□□ 0.41
HFM1P51979 DBP2YNL112W 1641 nt17.54■□□□□ 0.4
HFM1P51979 TRN1tP(UGG)A 72 nt16.97■□□□□ 0.31
HFM1P51979 SUF9tP(UGG)F 72 nt16.97■□□□□ 0.31
HFM1P51979 SUF8tP(UGG)H 72 nt16.97■□□□□ 0.31
HFM1P51979 tP(UGG)LtP(UGG)L 72 nt16.97■□□□□ 0.31
HFM1P51979 SUF7tP(UGG)M 72 nt16.97■□□□□ 0.31
HFM1P51979 tP(UGG)N1tP(UGG)N1 72 nt16.97■□□□□ 0.31
HFM1P51979 tP(UGG)N2tP(UGG)N2 72 nt16.97■□□□□ 0.31
HFM1P51979 tP(UGG)O1tP(UGG)O1 72 nt16.97■□□□□ 0.31
HFM1P51979 SUF11tP(UGG)O2 72 nt16.97■□□□□ 0.31
HFM1P51979 YBR190WYBR190W 312 nt16.96■□□□□ 0.31
HFM1P51979 CCC1YLR220W 969 nt16.85■□□□□ 0.29
HFM1P51979 YOL085CYOL085C 342 nt16.83■□□□□ 0.28
HFM1P51979 PKP1YIL042C 1185 nt16.68■□□□□ 0.26
HFM1P51979 RPP1BYDL130W 321 nt16.62■□□□□ 0.25
HFM1P51979 RTC3YHR087W 336 nt16.61■□□□□ 0.25
HFM1P51979 SCJ1YMR214W 1134 nt16.32■□□□□ 0.2
HFM1P51979 RVS167YDR388W 1449 nt16.28■□□□□ 0.2
HFM1P51979 PET122YER153C 765 nt15.98■□□□□ 0.15
HFM1P51979 tP(UGG)O3tP(UGG)O3 72 nt15.98■□□□□ 0.15
HFM1P51979 ATS1YAL020C 1002 nt15.81■□□□□ 0.12
HFM1P51979 SHR5YOL110W 714 nt15.7■□□□□ 0.1
HFM1P51979 PUT4YOR348C 1884 nt15.68■□□□□ 0.1
HFM1P51979 SCR1SCR1 522 nt15.62■□□□□ 0.09
HFM1P51979 RRN5YLR141W 1092 nt15.48■□□□□ 0.07
HFM1P51979 URN1YPR152C 1398 nt15.47■□□□□ 0.07
HFM1P51979 SSA3YBL075C 1950 nt15.46■□□□□ 0.07
HFM1P51979 DEP1YAL013W 1218 nt15.46■□□□□ 0.07
HFM1P51979 YDJ1YNL064C 1230 nt15.4■□□□□ 0.06
HFM1P51979 ARE1YCR048W 1833 nt15.33■□□□□ 0.04
HFM1P51979 SAH1YER043C 1350 nt15.3■□□□□ 0.04
HFM1P51979 OPI9YLR338W 858 nt15.26■□□□□ 0.03
HFM1P51979 GAR1YHR089C 618 nt15.18■□□□□ 0.02
HFM1P51979 POA1YBR022W 534 nt15.18■□□□□ 0.02
HFM1P51979 YER088W-BYER088W-B 147 nt15.17■□□□□ 0.02
HFM1P51979 YHR049C-AYHR049C-A 297 nt15.12■□□□□ 0.01
HFM1P51979 RPN10YHR200W 807 nt15.07■□□□□ 0
HFM1P51979 YNL208WYNL208W 600 nt15.07■□□□□ 0
HFM1P51979 RSB1YOR049C 1065 nt15.06■□□□□ 0
HFM1P51979 BSC6YOL137W 1494 nt14.89□□□□□ -0.03
HFM1P51979 PUN1YLR414C 792 nt14.78□□□□□ -0.04
HFM1P51979 BUD23YCR047C 828 nt14.75□□□□□ -0.05
HFM1P51979 PTC2YER089C 1395 nt14.73□□□□□ -0.05
HFM1P51979 YJR018WYJR018W 363 nt14.72□□□□□ -0.05
HFM1P51979 TIR1YER011W 765 nt14.66□□□□□ -0.06
HFM1P51979 PST2YDR032C 597 nt14.63□□□□□ -0.07
HFM1P51979 SSA1YAL005C 1929 nt14.59□□□□□ -0.07
HFM1P51979 YJR120WYJR120W 351 nt14.54□□□□□ -0.08
HFM1P51979 NAB2YGL122C 1578 nt14.51□□□□□ -0.09
HFM1P51979 SRB2YHR041C 633 nt14.4□□□□□ -0.1
HFM1P51979 SPT5YML010W 3192 nt14.4□□□□□ -0.1
HFM1P51979 FIS1YIL065C 468 nt14.36□□□□□ -0.11
HFM1P51979 FPR4YLR449W 1179 nt14.3□□□□□ -0.12
HFM1P51979 RPP2BYDR382W 333 nt14.29□□□□□ -0.12
HFM1P51979 DAL1YIR027C 1383 nt14.28□□□□□ -0.12
HFM1P51979 PHO4YFR034C 939 nt14.18□□□□□ -0.14
HFM1P51979 INM2YDR287W 879 nt14.16□□□□□ -0.14
HFM1P51979 YKL097CYKL097C 411 nt14.1□□□□□ -0.15
HFM1P51979 YBL100CYBL100C 315 nt14.05□□□□□ -0.16
HFM1P51979 WWM1YFL010C 636 nt14.02□□□□□ -0.17
HFM1P51979 SHU1YHL006C 453 nt14.02□□□□□ -0.17
HFM1P51979 BDH2YAL061W 1254 nt14□□□□□ -0.17
HFM1P51979 YPS1YLR120C 1710 nt13.99□□□□□ -0.17
HFM1P51979 MEP2YNL142W 1500 nt13.97□□□□□ -0.17
HFM1P51979 SSA4YER103W 1929 nt13.97□□□□□ -0.17
HFM1P51979 YAL037C-BYAL037C-B 975 nt13.94□□□□□ -0.18
HFM1P51979 FUN26YAL022C 1554 nt13.89□□□□□ -0.19
HFM1P51979 YDR095CYDR095C 411 nt13.85□□□□□ -0.19
HFM1P51979 YHR165W-AYHR165W-A 312 nt13.85□□□□□ -0.19
HFM1P51979 DCW1YKL046C 1350 nt13.83□□□□□ -0.19
HFM1P51979 TRM9YML014W 840 nt13.77□□□□□ -0.21
HFM1P51979 HOM6YJR139C 1080 nt13.75□□□□□ -0.21
HFM1P51979 MNP1YGL068W 585 nt13.73□□□□□ -0.21
HFM1P51979 YGR021WYGR021W 873 nt13.73□□□□□ -0.21
HFM1P51979 LSM3YLR438C-A 270 nt13.72□□□□□ -0.21
HFM1P51979 YFL021C-AYFL021C-A 855 nt13.7□□□□□ -0.22
HFM1P51979 ALF1YNL148C 765 nt13.7□□□□□ -0.22
HFM1P51979 CCT6YDR188W 1641 nt13.66□□□□□ -0.22
HFM1P51979 PTP1YDL230W 1008 nt13.63□□□□□ -0.23
HFM1P51979 CAC2YML102W 1407 nt13.59□□□□□ -0.23
HFM1P51979 EMI2YDR516C 1503 nt13.59□□□□□ -0.23
HFM1P51979 RPP2AYOL039W 321 nt13.58□□□□□ -0.24
HFM1P51979 RKM5YLR137W 1104 nt13.55□□□□□ -0.24
HFM1P51979 SIS1YNL007C 1059 nt13.52□□□□□ -0.25
HFM1P51979 YOR139CYOR139C 393 nt13.5□□□□□ -0.25
HFM1P51979 SUF2tP(AGG)C 72 nt13.49□□□□□ -0.25
HFM1P51979 SUF10tP(AGG)N 72 nt13.49□□□□□ -0.25
HFM1P51979 BDF1YLR399C 2061 nt13.46□□□□□ -0.25
HFM1P51979 YDL221WYDL221W 552 nt13.45□□□□□ -0.26
HFM1P51979 YBR220CYBR220C 1683 nt13.42□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms