Protein–RNA interactions for Protein: P38915

SPT8, Transcription factor SPT8, yeastyeast

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT8P38915 NSR1YGR159C 1245 nt22.28■■□□□ 1.16
SPT8P38915 YML009W-BYML009W-B 477 nt22.12■■□□□ 1.13
SPT8P38915 NOP1YDL014W 984 nt21.42■■□□□ 1.02
SPT8P38915 MDJ1YFL016C 1536 nt19.99■□□□□ 0.79
SPT8P38915 YKL036CYKL036C 393 nt19.52■□□□□ 0.72
SPT8P38915 SRX1YKL086W 384 nt18.75■□□□□ 0.59
SPT8P38915 Q0297Q0297 156 nt18.72■□□□□ 0.59
SPT8P38915 YJL027CYJL027C 417 nt18.42■□□□□ 0.54
SPT8P38915 YCR051WYCR051W 669 nt17.69■□□□□ 0.42
SPT8P38915 DBP2YNL112W 1641 nt17.65■□□□□ 0.42
SPT8P38915 SCS3YGL126W 1143 nt17.64■□□□□ 0.41
SPT8P38915 YBR190WYBR190W 312 nt17.16■□□□□ 0.34
SPT8P38915 TRN1tP(UGG)A 72 nt17.12■□□□□ 0.33
SPT8P38915 SUF9tP(UGG)F 72 nt17.12■□□□□ 0.33
SPT8P38915 SUF8tP(UGG)H 72 nt17.12■□□□□ 0.33
SPT8P38915 tP(UGG)LtP(UGG)L 72 nt17.12■□□□□ 0.33
SPT8P38915 SUF7tP(UGG)M 72 nt17.12■□□□□ 0.33
SPT8P38915 tP(UGG)N1tP(UGG)N1 72 nt17.12■□□□□ 0.33
SPT8P38915 tP(UGG)N2tP(UGG)N2 72 nt17.12■□□□□ 0.33
SPT8P38915 tP(UGG)O1tP(UGG)O1 72 nt17.12■□□□□ 0.33
SPT8P38915 SUF11tP(UGG)O2 72 nt17.12■□□□□ 0.33
SPT8P38915 YOL085CYOL085C 342 nt16.94■□□□□ 0.3
SPT8P38915 CCC1YLR220W 969 nt16.85■□□□□ 0.29
SPT8P38915 RPP1BYDL130W 321 nt16.77■□□□□ 0.28
SPT8P38915 RTC3YHR087W 336 nt16.67■□□□□ 0.26
SPT8P38915 PKP1YIL042C 1185 nt16.66■□□□□ 0.26
SPT8P38915 RVS167YDR388W 1449 nt16.45■□□□□ 0.22
SPT8P38915 SCJ1YMR214W 1134 nt16.37■□□□□ 0.21
SPT8P38915 tP(UGG)O3tP(UGG)O3 72 nt16.09■□□□□ 0.17
SPT8P38915 PET122YER153C 765 nt16.04■□□□□ 0.16
SPT8P38915 SSA3YBL075C 1950 nt16.01■□□□□ 0.15
SPT8P38915 SHR5YOL110W 714 nt15.86■□□□□ 0.13
SPT8P38915 PUT4YOR348C 1884 nt15.82■□□□□ 0.12
SPT8P38915 SCR1SCR1 522 nt15.76■□□□□ 0.11
SPT8P38915 ATS1YAL020C 1002 nt15.71■□□□□ 0.11
SPT8P38915 YDJ1YNL064C 1230 nt15.59■□□□□ 0.09
SPT8P38915 URN1YPR152C 1398 nt15.56■□□□□ 0.08
SPT8P38915 RRN5YLR141W 1092 nt15.54■□□□□ 0.08
SPT8P38915 DEP1YAL013W 1218 nt15.44■□□□□ 0.06
SPT8P38915 ARE1YCR048W 1833 nt15.44■□□□□ 0.06
SPT8P38915 OPI9YLR338W 858 nt15.43■□□□□ 0.06
SPT8P38915 SAH1YER043C 1350 nt15.36■□□□□ 0.05
SPT8P38915 YER088W-BYER088W-B 147 nt15.25■□□□□ 0.03
SPT8P38915 RPN10YHR200W 807 nt15.25■□□□□ 0.03
SPT8P38915 POA1YBR022W 534 nt15.24■□□□□ 0.03
SPT8P38915 GAR1YHR089C 618 nt15.22■□□□□ 0.03
SPT8P38915 YNL208WYNL208W 600 nt15.22■□□□□ 0.03
SPT8P38915 YHR049C-AYHR049C-A 297 nt15.19■□□□□ 0.02
SPT8P38915 RSB1YOR049C 1065 nt15.1■□□□□ 0.01
SPT8P38915 BSC6YOL137W 1494 nt14.97□□□□□ -0.01
SPT8P38915 PUN1YLR414C 792 nt14.95□□□□□ -0.02
SPT8P38915 YJR018WYJR018W 363 nt14.83□□□□□ -0.04
SPT8P38915 PTC2YER089C 1395 nt14.8□□□□□ -0.04
SPT8P38915 BUD23YCR047C 828 nt14.77□□□□□ -0.05
SPT8P38915 TIR1YER011W 765 nt14.75□□□□□ -0.05
SPT8P38915 NAB2YGL122C 1578 nt14.67□□□□□ -0.06
SPT8P38915 SSA1YAL005C 1929 nt14.66□□□□□ -0.06
SPT8P38915 PST2YDR032C 597 nt14.62□□□□□ -0.07
SPT8P38915 YJR120WYJR120W 351 nt14.62□□□□□ -0.07
SPT8P38915 SPT5YML010W 3192 nt14.61□□□□□ -0.07
SPT8P38915 FIS1YIL065C 468 nt14.46□□□□□ -0.09
SPT8P38915 RPP2BYDR382W 333 nt14.43□□□□□ -0.1
SPT8P38915 DAL1YIR027C 1383 nt14.42□□□□□ -0.1
SPT8P38915 SRB2YHR041C 633 nt14.37□□□□□ -0.11
SPT8P38915 INM2YDR287W 879 nt14.35□□□□□ -0.11
SPT8P38915 PHO4YFR034C 939 nt14.29□□□□□ -0.12
SPT8P38915 FPR4YLR449W 1179 nt14.29□□□□□ -0.12
SPT8P38915 SSA4YER103W 1929 nt14.25□□□□□ -0.13
SPT8P38915 BDH2YAL061W 1254 nt14.15□□□□□ -0.14
SPT8P38915 YBL100CYBL100C 315 nt14.15□□□□□ -0.14
SPT8P38915 YPS1YLR120C 1710 nt14.13□□□□□ -0.15
SPT8P38915 MEP2YNL142W 1500 nt14.1□□□□□ -0.15
SPT8P38915 SHU1YHL006C 453 nt14.06□□□□□ -0.16
SPT8P38915 WWM1YFL010C 636 nt14.05□□□□□ -0.16
SPT8P38915 YDR095CYDR095C 411 nt14□□□□□ -0.17
SPT8P38915 FUN26YAL022C 1554 nt13.99□□□□□ -0.17
SPT8P38915 LSM3YLR438C-A 270 nt13.93□□□□□ -0.18
SPT8P38915 YHR165W-AYHR165W-A 312 nt13.92□□□□□ -0.18
SPT8P38915 YGR021WYGR021W 873 nt13.9□□□□□ -0.18
SPT8P38915 YAL037C-BYAL037C-B 975 nt13.89□□□□□ -0.19
SPT8P38915 TRM9YML014W 840 nt13.88□□□□□ -0.19
SPT8P38915 DCW1YKL046C 1350 nt13.87□□□□□ -0.19
SPT8P38915 HOM6YJR139C 1080 nt13.86□□□□□ -0.19
SPT8P38915 YFL021C-AYFL021C-A 855 nt13.85□□□□□ -0.19
SPT8P38915 YKL097CYKL097C 411 nt13.83□□□□□ -0.2
SPT8P38915 CCT6YDR188W 1641 nt13.82□□□□□ -0.2
SPT8P38915 BDF1YLR399C 2061 nt13.78□□□□□ -0.2
SPT8P38915 ALF1YNL148C 765 nt13.78□□□□□ -0.2
SPT8P38915 PTP1YDL230W 1008 nt13.73□□□□□ -0.21
SPT8P38915 MNP1YGL068W 585 nt13.71□□□□□ -0.21
SPT8P38915 RPP2AYOL039W 321 nt13.71□□□□□ -0.21
SPT8P38915 EMI2YDR516C 1503 nt13.69□□□□□ -0.22
SPT8P38915 SIS1YNL007C 1059 nt13.68□□□□□ -0.22
SPT8P38915 SUF2tP(AGG)C 72 nt13.67□□□□□ -0.22
SPT8P38915 SUF10tP(AGG)N 72 nt13.67□□□□□ -0.22
SPT8P38915 CAC2YML102W 1407 nt13.64□□□□□ -0.23
SPT8P38915 RKM5YLR137W 1104 nt13.64□□□□□ -0.23
SPT8P38915 TAT1YBR069C 1860 nt13.59□□□□□ -0.23
SPT8P38915 YDL221WYDL221W 552 nt13.58□□□□□ -0.24
SPT8P38915 YMR090WYMR090W 684 nt13.57□□□□□ -0.24
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms