Protein–RNA interactions for Protein: P40460

NDC80, Kinetochore protein NDC80, yeastyeast

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDC80P40460 NSR1YGR159C 1245 nt21.62■■□□□ 1.05
NDC80P40460 YML009W-BYML009W-B 477 nt21.29■■□□□ 1
NDC80P40460 NOP1YDL014W 984 nt20.52■□□□□ 0.88
NDC80P40460 MDJ1YFL016C 1536 nt19.64■□□□□ 0.73
NDC80P40460 YKL036CYKL036C 393 nt18.46■□□□□ 0.55
NDC80P40460 YJL027CYJL027C 417 nt18.09■□□□□ 0.49
NDC80P40460 SRX1YKL086W 384 nt17.92■□□□□ 0.46
NDC80P40460 Q0297Q0297 156 nt17.8■□□□□ 0.44
NDC80P40460 DBP2YNL112W 1641 nt17.19■□□□□ 0.34
NDC80P40460 YCR051WYCR051W 669 nt16.95■□□□□ 0.3
NDC80P40460 YBR190WYBR190W 312 nt16.89■□□□□ 0.29
NDC80P40460 SCS3YGL126W 1143 nt16.53■□□□□ 0.24
NDC80P40460 TRN1tP(UGG)A 72 nt16.49■□□□□ 0.23
NDC80P40460 SUF9tP(UGG)F 72 nt16.49■□□□□ 0.23
NDC80P40460 SUF8tP(UGG)H 72 nt16.49■□□□□ 0.23
NDC80P40460 tP(UGG)LtP(UGG)L 72 nt16.49■□□□□ 0.23
NDC80P40460 SUF7tP(UGG)M 72 nt16.49■□□□□ 0.23
NDC80P40460 tP(UGG)N1tP(UGG)N1 72 nt16.49■□□□□ 0.23
NDC80P40460 tP(UGG)N2tP(UGG)N2 72 nt16.49■□□□□ 0.23
NDC80P40460 tP(UGG)O1tP(UGG)O1 72 nt16.49■□□□□ 0.23
NDC80P40460 SUF11tP(UGG)O2 72 nt16.49■□□□□ 0.23
NDC80P40460 RTC3YHR087W 336 nt16.48■□□□□ 0.23
NDC80P40460 CCC1YLR220W 969 nt16.31■□□□□ 0.2
NDC80P40460 SSA3YBL075C 1950 nt16.17■□□□□ 0.18
NDC80P40460 RVS167YDR388W 1449 nt16.05■□□□□ 0.16
NDC80P40460 YOL085CYOL085C 342 nt16.01■□□□□ 0.15
NDC80P40460 RPP1BYDL130W 321 nt15.96■□□□□ 0.15
NDC80P40460 SCJ1YMR214W 1134 nt15.85■□□□□ 0.13
NDC80P40460 PKP1YIL042C 1185 nt15.8■□□□□ 0.12
NDC80P40460 PUT4YOR348C 1884 nt15.72■□□□□ 0.11
NDC80P40460 tP(UGG)O3tP(UGG)O3 72 nt15.44■□□□□ 0.06
NDC80P40460 SHR5YOL110W 714 nt15.38■□□□□ 0.05
NDC80P40460 PET122YER153C 765 nt15.3■□□□□ 0.04
NDC80P40460 ARE1YCR048W 1833 nt15.29■□□□□ 0.04
NDC80P40460 URN1YPR152C 1398 nt15.24■□□□□ 0.03
NDC80P40460 POA1YBR022W 534 nt15.19■□□□□ 0.02
NDC80P40460 SAH1YER043C 1350 nt15.16■□□□□ 0.02
NDC80P40460 OPI9YLR338W 858 nt15.13■□□□□ 0.01
NDC80P40460 DEP1YAL013W 1218 nt15.09■□□□□ 0.01
NDC80P40460 YHR049C-AYHR049C-A 297 nt15.08■□□□□ 0
NDC80P40460 SCR1SCR1 522 nt15.01□□□□□ -0.01
NDC80P40460 YDJ1YNL064C 1230 nt14.95□□□□□ -0.02
NDC80P40460 BSC6YOL137W 1494 nt14.95□□□□□ -0.02
NDC80P40460 RPN10YHR200W 807 nt14.92□□□□□ -0.02
NDC80P40460 RRN5YLR141W 1092 nt14.81□□□□□ -0.04
NDC80P40460 YNL208WYNL208W 600 nt14.81□□□□□ -0.04
NDC80P40460 BUD23YCR047C 828 nt14.69□□□□□ -0.06
NDC80P40460 PUN1YLR414C 792 nt14.69□□□□□ -0.06
NDC80P40460 GAR1YHR089C 618 nt14.68□□□□□ -0.06
NDC80P40460 ATS1YAL020C 1002 nt14.65□□□□□ -0.06
NDC80P40460 SPT5YML010W 3192 nt14.65□□□□□ -0.06
NDC80P40460 PTC2YER089C 1395 nt14.6□□□□□ -0.07
NDC80P40460 YER088W-BYER088W-B 147 nt14.52□□□□□ -0.09
NDC80P40460 YJR018WYJR018W 363 nt14.51□□□□□ -0.09
NDC80P40460 NAB2YGL122C 1578 nt14.48□□□□□ -0.09
NDC80P40460 RSB1YOR049C 1065 nt14.35□□□□□ -0.11
NDC80P40460 SSA4YER103W 1929 nt14.35□□□□□ -0.11
NDC80P40460 TIR1YER011W 765 nt14.22□□□□□ -0.13
NDC80P40460 FIS1YIL065C 468 nt14.21□□□□□ -0.13
NDC80P40460 DAL1YIR027C 1383 nt14.19□□□□□ -0.14
NDC80P40460 YJR120WYJR120W 351 nt14.18□□□□□ -0.14
NDC80P40460 SSA1YAL005C 1929 nt14.15□□□□□ -0.14
NDC80P40460 FPR4YLR449W 1179 nt14.13□□□□□ -0.15
NDC80P40460 MEP2YNL142W 1500 nt14.1□□□□□ -0.15
NDC80P40460 RPP2BYDR382W 333 nt14.09□□□□□ -0.15
NDC80P40460 INM2YDR287W 879 nt14.07□□□□□ -0.16
NDC80P40460 PHO4YFR034C 939 nt14.05□□□□□ -0.16
NDC80P40460 YPS1YLR120C 1710 nt13.96□□□□□ -0.17
NDC80P40460 YBL100CYBL100C 315 nt13.85□□□□□ -0.19
NDC80P40460 DCW1YKL046C 1350 nt13.84□□□□□ -0.19
NDC80P40460 BDF1YLR399C 2061 nt13.84□□□□□ -0.19
NDC80P40460 YHR165W-AYHR165W-A 312 nt13.83□□□□□ -0.2
NDC80P40460 SRB2YHR041C 633 nt13.82□□□□□ -0.2
NDC80P40460 YDR095CYDR095C 411 nt13.79□□□□□ -0.2
NDC80P40460 BDH2YAL061W 1254 nt13.73□□□□□ -0.21
NDC80P40460 FUN26YAL022C 1554 nt13.66□□□□□ -0.22
NDC80P40460 EMI2YDR516C 1503 nt13.66□□□□□ -0.22
NDC80P40460 PST2YDR032C 597 nt13.66□□□□□ -0.22
NDC80P40460 TAT1YBR069C 1860 nt13.65□□□□□ -0.22
NDC80P40460 PAC11YDR488C 1602 nt13.62□□□□□ -0.23
NDC80P40460 YMR090WYMR090W 684 nt13.62□□□□□ -0.23
NDC80P40460 YBR220CYBR220C 1683 nt13.59□□□□□ -0.23
NDC80P40460 ALF1YNL148C 765 nt13.57□□□□□ -0.24
NDC80P40460 TRM9YML014W 840 nt13.55□□□□□ -0.24
NDC80P40460 YDL221WYDL221W 552 nt13.54□□□□□ -0.24
NDC80P40460 PTP1YDL230W 1008 nt13.54□□□□□ -0.24
NDC80P40460 RPP2AYOL039W 321 nt13.54□□□□□ -0.24
NDC80P40460 CAC2YML102W 1407 nt13.51□□□□□ -0.25
NDC80P40460 WWM1YFL010C 636 nt13.5□□□□□ -0.25
NDC80P40460 LSM3YLR438C-A 270 nt13.47□□□□□ -0.25
NDC80P40460 SDH1YKL148C 1923 nt13.45□□□□□ -0.26
NDC80P40460 CCT6YDR188W 1641 nt13.45□□□□□ -0.26
NDC80P40460 SIS1YNL007C 1059 nt13.39□□□□□ -0.27
NDC80P40460 SUF2tP(AGG)C 72 nt13.37□□□□□ -0.27
NDC80P40460 SUF10tP(AGG)N 72 nt13.37□□□□□ -0.27
NDC80P40460 NVJ2YPR091C 2313 nt13.34□□□□□ -0.27
NDC80P40460 IRC15YPL017C 1500 nt13.31□□□□□ -0.28
NDC80P40460 SCC4YER147C 1875 nt13.3□□□□□ -0.28
NDC80P40460 YFL021C-AYFL021C-A 855 nt13.3□□□□□ -0.28
NDC80P40460 YGR021WYGR021W 873 nt13.28□□□□□ -0.28
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms