Protein–RNA interactions for Protein: Q08964

YPL216W, Putative ISWI chromatin-remodeling complex subunit YPL216W, yeastyeast

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL216WQ08964 YML009W-BYML009W-B 477 nt22.41■■□□□ 1.18
YPL216WQ08964 NSR1YGR159C 1245 nt22.37■■□□□ 1.17
YPL216WQ08964 NOP1YDL014W 984 nt21.67■■□□□ 1.06
YPL216WQ08964 MDJ1YFL016C 1536 nt20.02■□□□□ 0.8
YPL216WQ08964 YKL036CYKL036C 393 nt19.97■□□□□ 0.79
YPL216WQ08964 Q0297Q0297 156 nt19.06■□□□□ 0.64
YPL216WQ08964 SRX1YKL086W 384 nt19.03■□□□□ 0.64
YPL216WQ08964 YJL027CYJL027C 417 nt18.6■□□□□ 0.57
YPL216WQ08964 SCS3YGL126W 1143 nt18.2■□□□□ 0.5
YPL216WQ08964 YCR051WYCR051W 669 nt17.98■□□□□ 0.47
YPL216WQ08964 DBP2YNL112W 1641 nt17.77■□□□□ 0.44
YPL216WQ08964 YOL085CYOL085C 342 nt17.36■□□□□ 0.37
YPL216WQ08964 TRN1tP(UGG)A 72 nt17.32■□□□□ 0.36
YPL216WQ08964 SUF9tP(UGG)F 72 nt17.32■□□□□ 0.36
YPL216WQ08964 SUF8tP(UGG)H 72 nt17.32■□□□□ 0.36
YPL216WQ08964 tP(UGG)LtP(UGG)L 72 nt17.32■□□□□ 0.36
YPL216WQ08964 SUF7tP(UGG)M 72 nt17.32■□□□□ 0.36
YPL216WQ08964 tP(UGG)N1tP(UGG)N1 72 nt17.32■□□□□ 0.36
YPL216WQ08964 tP(UGG)N2tP(UGG)N2 72 nt17.32■□□□□ 0.36
YPL216WQ08964 tP(UGG)O1tP(UGG)O1 72 nt17.32■□□□□ 0.36
YPL216WQ08964 SUF11tP(UGG)O2 72 nt17.32■□□□□ 0.36
YPL216WQ08964 PKP1YIL042C 1185 nt17.09■□□□□ 0.33
YPL216WQ08964 RPP1BYDL130W 321 nt17.07■□□□□ 0.32
YPL216WQ08964 YBR190WYBR190W 312 nt17.05■□□□□ 0.32
YPL216WQ08964 CCC1YLR220W 969 nt17.04■□□□□ 0.32
YPL216WQ08964 RTC3YHR087W 336 nt16.57■□□□□ 0.24
YPL216WQ08964 SCJ1YMR214W 1134 nt16.57■□□□□ 0.24
YPL216WQ08964 RVS167YDR388W 1449 nt16.45■□□□□ 0.22
YPL216WQ08964 PET122YER153C 765 nt16.37■□□□□ 0.21
YPL216WQ08964 tP(UGG)O3tP(UGG)O3 72 nt16.32■□□□□ 0.2
YPL216WQ08964 ATS1YAL020C 1002 nt16.23■□□□□ 0.19
YPL216WQ08964 SCR1SCR1 522 nt16.02■□□□□ 0.16
YPL216WQ08964 SHR5YOL110W 714 nt15.94■□□□□ 0.14
YPL216WQ08964 RRN5YLR141W 1092 nt15.86■□□□□ 0.13
YPL216WQ08964 YDJ1YNL064C 1230 nt15.78■□□□□ 0.12
YPL216WQ08964 PUT4YOR348C 1884 nt15.67■□□□□ 0.1
YPL216WQ08964 YER088W-BYER088W-B 147 nt15.58■□□□□ 0.08
YPL216WQ08964 URN1YPR152C 1398 nt15.56■□□□□ 0.08
YPL216WQ08964 DEP1YAL013W 1218 nt15.53■□□□□ 0.08
YPL216WQ08964 RSB1YOR049C 1065 nt15.44■□□□□ 0.06
YPL216WQ08964 GAR1YHR089C 618 nt15.42■□□□□ 0.06
YPL216WQ08964 OPI9YLR338W 858 nt15.38■□□□□ 0.05
YPL216WQ08964 ARE1YCR048W 1833 nt15.36■□□□□ 0.05
YPL216WQ08964 SAH1YER043C 1350 nt15.31■□□□□ 0.04
YPL216WQ08964 YNL208WYNL208W 600 nt15.24■□□□□ 0.03
YPL216WQ08964 RPN10YHR200W 807 nt15.2■□□□□ 0.02
YPL216WQ08964 PST2YDR032C 597 nt15.09■□□□□ 0.01
YPL216WQ08964 YHR049C-AYHR049C-A 297 nt15.08■□□□□ 0
YPL216WQ08964 POA1YBR022W 534 nt15.08■□□□□ 0
YPL216WQ08964 TIR1YER011W 765 nt14.92□□□□□ -0.02
YPL216WQ08964 PUN1YLR414C 792 nt14.88□□□□□ -0.03
YPL216WQ08964 SSA1YAL005C 1929 nt14.84□□□□□ -0.03
YPL216WQ08964 SSA3YBL075C 1950 nt14.84□□□□□ -0.03
YPL216WQ08964 YJR018WYJR018W 363 nt14.82□□□□□ -0.04
YPL216WQ08964 BSC6YOL137W 1494 nt14.81□□□□□ -0.04
YPL216WQ08964 YJR120WYJR120W 351 nt14.78□□□□□ -0.04
YPL216WQ08964 PTC2YER089C 1395 nt14.74□□□□□ -0.05
YPL216WQ08964 SRB2YHR041C 633 nt14.7□□□□□ -0.06
YPL216WQ08964 BUD23YCR047C 828 nt14.65□□□□□ -0.06
YPL216WQ08964 NAB2YGL122C 1578 nt14.54□□□□□ -0.08
YPL216WQ08964 SHU1YHL006C 453 nt14.5□□□□□ -0.09
YPL216WQ08964 FIS1YIL065C 468 nt14.46□□□□□ -0.09
YPL216WQ08964 RPP2BYDR382W 333 nt14.4□□□□□ -0.1
YPL216WQ08964 SPT5YML010W 3192 nt14.38□□□□□ -0.11
YPL216WQ08964 DAL1YIR027C 1383 nt14.35□□□□□ -0.11
YPL216WQ08964 YKL097CYKL097C 411 nt14.34□□□□□ -0.11
YPL216WQ08964 WWM1YFL010C 636 nt14.28□□□□□ -0.12
YPL216WQ08964 YAL037C-BYAL037C-B 975 nt14.28□□□□□ -0.12
YPL216WQ08964 INM2YDR287W 879 nt14.26□□□□□ -0.13
YPL216WQ08964 PHO4YFR034C 939 nt14.25□□□□□ -0.13
YPL216WQ08964 FPR4YLR449W 1179 nt14.24□□□□□ -0.13
YPL216WQ08964 BDH2YAL061W 1254 nt14.2□□□□□ -0.14
YPL216WQ08964 YBL100CYBL100C 315 nt14.15□□□□□ -0.14
YPL216WQ08964 HOM6YJR139C 1080 nt14.14□□□□□ -0.15
YPL216WQ08964 YGR021WYGR021W 873 nt14.09□□□□□ -0.15
YPL216WQ08964 MNP1YGL068W 585 nt14.07□□□□□ -0.16
YPL216WQ08964 YPS1YLR120C 1710 nt14.03□□□□□ -0.16
YPL216WQ08964 YFL021C-AYFL021C-A 855 nt14.01□□□□□ -0.17
YPL216WQ08964 FUN26YAL022C 1554 nt14□□□□□ -0.17
YPL216WQ08964 LSM3YLR438C-A 270 nt13.98□□□□□ -0.17
YPL216WQ08964 YDR095CYDR095C 411 nt13.94□□□□□ -0.18
YPL216WQ08964 YOR139CYOR139C 393 nt13.93□□□□□ -0.18
YPL216WQ08964 MEP2YNL142W 1500 nt13.91□□□□□ -0.18
YPL216WQ08964 RKM5YLR137W 1104 nt13.91□□□□□ -0.18
YPL216WQ08964 TRM9YML014W 840 nt13.88□□□□□ -0.19
YPL216WQ08964 CCT6YDR188W 1641 nt13.85□□□□□ -0.19
YPL216WQ08964 YHR165W-AYHR165W-A 312 nt13.78□□□□□ -0.2
YPL216WQ08964 SSA4YER103W 1929 nt13.74□□□□□ -0.21
YPL216WQ08964 DCW1YKL046C 1350 nt13.74□□□□□ -0.21
YPL216WQ08964 ALF1YNL148C 765 nt13.72□□□□□ -0.21
YPL216WQ08964 PTP1YDL230W 1008 nt13.71□□□□□ -0.21
YPL216WQ08964 YOL037CYOL037C 354 nt13.71□□□□□ -0.21
YPL216WQ08964 NPL3YDR432W 1245 nt13.66□□□□□ -0.22
YPL216WQ08964 SIS1YNL007C 1059 nt13.65□□□□□ -0.22
YPL216WQ08964 SUF2tP(AGG)C 72 nt13.62□□□□□ -0.23
YPL216WQ08964 SUF10tP(AGG)N 72 nt13.62□□□□□ -0.23
YPL216WQ08964 RPP2AYOL039W 321 nt13.62□□□□□ -0.23
YPL216WQ08964 CAC2YML102W 1407 nt13.58□□□□□ -0.24
YPL216WQ08964 EMI2YDR516C 1503 nt13.51□□□□□ -0.25
YPL216WQ08964 ART5YGR068C 1761 nt13.46□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms