Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
PCDHA9Q9Y5H5 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PCDHA9Q9Y5H5 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.74■■■□□ 2.67
PCDHA9Q9Y5H5 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
PCDHA9Q9Y5H5 AL356512.1-201ENST00000607453 1739 ntBASIC31.42■■■□□ 2.62
PCDHA9Q9Y5H5 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
PCDHA9Q9Y5H5 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.22■■■□□ 2.59
PCDHA9Q9Y5H5 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PCDHA9Q9Y5H5 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PCDHA9Q9Y5H5 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.93■■■□□ 2.54
PCDHA9Q9Y5H5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PCDHA9Q9Y5H5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.58■■■□□ 2.49
PCDHA9Q9Y5H5 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.54■■■□□ 2.48
PCDHA9Q9Y5H5 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.53■■■□□ 2.48
PCDHA9Q9Y5H5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
PCDHA9Q9Y5H5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PCDHA9Q9Y5H5 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.44■■■□□ 2.46
PCDHA9Q9Y5H5 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.25■■■□□ 2.43
PCDHA9Q9Y5H5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCDHA9Q9Y5H5 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCDHA9Q9Y5H5 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
PCDHA9Q9Y5H5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.4
PCDHA9Q9Y5H5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHA9Q9Y5H5 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.93■■■□□ 2.38
PCDHA9Q9Y5H5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.88■■■□□ 2.37
PCDHA9Q9Y5H5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
PCDHA9Q9Y5H5 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
PCDHA9Q9Y5H5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.67■■■□□ 2.34
PCDHA9Q9Y5H5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PCDHA9Q9Y5H5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHA9Q9Y5H5 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
PCDHA9Q9Y5H5 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
PCDHA9Q9Y5H5 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.44■■■□□ 2.3
PCDHA9Q9Y5H5 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCDHA9Q9Y5H5 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
PCDHA9Q9Y5H5 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHA9Q9Y5H5 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.17■■■□□ 2.26
PCDHA9Q9Y5H5 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHA9Q9Y5H5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.15■■■□□ 2.26
PCDHA9Q9Y5H5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
PCDHA9Q9Y5H5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PCDHA9Q9Y5H5 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
PCDHA9Q9Y5H5 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.03■■■□□ 2.24
PCDHA9Q9Y5H5 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCDHA9Q9Y5H5 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.91■■■□□ 2.22
PCDHA9Q9Y5H5 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PCDHA9Q9Y5H5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PCDHA9Q9Y5H5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PCDHA9Q9Y5H5 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PCDHA9Q9Y5H5 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PCDHA9Q9Y5H5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.71■■■□□ 2.19
PCDHA9Q9Y5H5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHA9Q9Y5H5 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHA9Q9Y5H5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHA9Q9Y5H5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHA9Q9Y5H5 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCDHA9Q9Y5H5 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PCDHA9Q9Y5H5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCDHA9Q9Y5H5 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
PCDHA9Q9Y5H5 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHA9Q9Y5H5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
PCDHA9Q9Y5H5 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
PCDHA9Q9Y5H5 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
PCDHA9Q9Y5H5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.43■■■□□ 2.14
PCDHA9Q9Y5H5 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHA9Q9Y5H5 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.38■■■□□ 2.13
PCDHA9Q9Y5H5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHA9Q9Y5H5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHA9Q9Y5H5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.33■■■□□ 2.13
PCDHA9Q9Y5H5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHA9Q9Y5H5 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.32■■■□□ 2.12
PCDHA9Q9Y5H5 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PCDHA9Q9Y5H5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.28■■■□□ 2.12
PCDHA9Q9Y5H5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.16■■■□□ 2.1
PCDHA9Q9Y5H5 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHA9Q9Y5H5 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
PCDHA9Q9Y5H5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
PCDHA9Q9Y5H5 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PCDHA9Q9Y5H5 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
PCDHA9Q9Y5H5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PCDHA9Q9Y5H5 AC015813.7-201ENST00000623294 581 ntBASIC28.03■■■□□ 2.08
PCDHA9Q9Y5H5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PCDHA9Q9Y5H5 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PCDHA9Q9Y5H5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHA9Q9Y5H5 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.05
PCDHA9Q9Y5H5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
PCDHA9Q9Y5H5 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
PCDHA9Q9Y5H5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.86■■■□□ 2.05
PCDHA9Q9Y5H5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHA9Q9Y5H5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.85■■■□□ 2.05
PCDHA9Q9Y5H5 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCDHA9Q9Y5H5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
PCDHA9Q9Y5H5 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PCDHA9Q9Y5H5 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.82■■■□□ 2.04
PCDHA9Q9Y5H5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDHA9Q9Y5H5 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDHA9Q9Y5H5 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCDHA9Q9Y5H5 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
PCDHA9Q9Y5H5 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
PCDHA9Q9Y5H5 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms