Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC40.05■■■■■ 4
TRIM17Q9Y577 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC39.8■■■■□ 3.96
TRIM17Q9Y577 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC39.61■■■■□ 3.93
TRIM17Q9Y577 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
TRIM17Q9Y577 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
TRIM17Q9Y577 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC38.44■■■■□ 3.74
TRIM17Q9Y577 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC38.32■■■■□ 3.72
TRIM17Q9Y577 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
TRIM17Q9Y577 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC38.23■■■■□ 3.71
TRIM17Q9Y577 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC38.01■■■■□ 3.67
TRIM17Q9Y577 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
TRIM17Q9Y577 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC37.79■■■■□ 3.64
TRIM17Q9Y577 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC37.69■■■■□ 3.62
TRIM17Q9Y577 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
TRIM17Q9Y577 AL356512.1-201ENST00000607453 1739 ntBASIC37.61■■■■□ 3.61
TRIM17Q9Y577 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
TRIM17Q9Y577 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC37.34■■■■□ 3.57
TRIM17Q9Y577 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
TRIM17Q9Y577 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC37.16■■■■□ 3.54
TRIM17Q9Y577 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC37.15■■■■□ 3.54
TRIM17Q9Y577 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
TRIM17Q9Y577 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
TRIM17Q9Y577 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC37.1■■■■□ 3.53
TRIM17Q9Y577 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC37.05■■■■□ 3.52
TRIM17Q9Y577 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
TRIM17Q9Y577 INO80B-203ENST00000409917 796 ntTSL 2 BASIC36.81■■■■□ 3.48
TRIM17Q9Y577 ZNRF2P1-201ENST00000441407 443 ntBASIC36.77■■■■□ 3.48
TRIM17Q9Y577 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC36.73■■■■□ 3.47
TRIM17Q9Y577 AC006077.2-201ENST00000623591 457 ntBASIC36.67■■■■□ 3.46
TRIM17Q9Y577 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC36.58■■■■□ 3.45
TRIM17Q9Y577 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC36.55■■■■□ 3.44
TRIM17Q9Y577 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC36.4■■■■□ 3.42
TRIM17Q9Y577 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
TRIM17Q9Y577 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC36.29■■■■□ 3.4
TRIM17Q9Y577 AC015813.7-201ENST00000623294 581 ntBASIC36.12■■■■□ 3.37
TRIM17Q9Y577 AP002365.1-201ENST00000603448 772 ntBASIC35.84■■■■□ 3.33
TRIM17Q9Y577 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
TRIM17Q9Y577 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC35.78■■■■□ 3.32
TRIM17Q9Y577 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.7■■■■□ 3.31
TRIM17Q9Y577 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC35.62■■■■□ 3.29
TRIM17Q9Y577 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
TRIM17Q9Y577 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
TRIM17Q9Y577 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
TRIM17Q9Y577 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
TRIM17Q9Y577 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC35.52■■■■□ 3.28
TRIM17Q9Y577 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC35.51■■■■□ 3.28
TRIM17Q9Y577 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.47■■■■□ 3.27
TRIM17Q9Y577 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.41■■■■□ 3.26
TRIM17Q9Y577 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC35.36■■■■□ 3.25
TRIM17Q9Y577 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC35.36■■■■□ 3.25
TRIM17Q9Y577 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC35.35■■■■□ 3.25
TRIM17Q9Y577 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC35.35■■■■□ 3.25
TRIM17Q9Y577 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC35.27■■■■□ 3.24
TRIM17Q9Y577 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC35.24■■■■□ 3.23
TRIM17Q9Y577 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC35.2■■■■□ 3.23
TRIM17Q9Y577 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
TRIM17Q9Y577 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC35.2■■■■□ 3.23
TRIM17Q9Y577 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC35.18■■■■□ 3.22
TRIM17Q9Y577 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC35.12■■■■□ 3.21
TRIM17Q9Y577 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC35.08■■■■□ 3.21
TRIM17Q9Y577 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
TRIM17Q9Y577 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC35.05■■■■□ 3.2
TRIM17Q9Y577 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
TRIM17Q9Y577 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC34.97■■■■□ 3.19
TRIM17Q9Y577 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
TRIM17Q9Y577 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
TRIM17Q9Y577 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
TRIM17Q9Y577 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
TRIM17Q9Y577 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC34.87■■■■□ 3.17
TRIM17Q9Y577 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC34.86■■■■□ 3.17
TRIM17Q9Y577 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
TRIM17Q9Y577 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
TRIM17Q9Y577 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC34.72■■■■□ 3.15
TRIM17Q9Y577 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
TRIM17Q9Y577 DYNLL1-208ENST00000550178 581 ntBASIC34.71■■■■□ 3.15
TRIM17Q9Y577 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC34.66■■■■□ 3.14
TRIM17Q9Y577 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC34.65■■■■□ 3.14
TRIM17Q9Y577 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
TRIM17Q9Y577 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
TRIM17Q9Y577 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC34.54■■■■□ 3.12
TRIM17Q9Y577 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC34.54■■■■□ 3.12
TRIM17Q9Y577 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC34.53■■■■□ 3.12
TRIM17Q9Y577 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
TRIM17Q9Y577 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC34.52■■■■□ 3.12
TRIM17Q9Y577 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC34.5■■■■□ 3.11
TRIM17Q9Y577 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
TRIM17Q9Y577 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
TRIM17Q9Y577 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC34.46■■■■□ 3.11
TRIM17Q9Y577 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC34.44■■■■□ 3.1
TRIM17Q9Y577 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
TRIM17Q9Y577 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC34.43■■■■□ 3.1
TRIM17Q9Y577 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC34.43■■■■□ 3.1
TRIM17Q9Y577 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
TRIM17Q9Y577 AL031258.1-201ENST00000623562 325 ntBASIC34.41■■■■□ 3.1
TRIM17Q9Y577 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC34.4■■■■□ 3.1
TRIM17Q9Y577 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
TRIM17Q9Y577 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC34.38■■■■□ 3.09
TRIM17Q9Y577 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC34.38■■■■□ 3.09
TRIM17Q9Y577 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
TRIM17Q9Y577 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC34.35■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms