Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RNF216Q9NWF9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.18■■■□□ 2.42
RNF216Q9NWF9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RNF216Q9NWF9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RNF216Q9NWF9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.16■■■□□ 2.42
RNF216Q9NWF9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RNF216Q9NWF9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.15■■■□□ 2.42
RNF216Q9NWF9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.14■■■□□ 2.42
RNF216Q9NWF9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.14■■■□□ 2.42
RNF216Q9NWF9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RNF216Q9NWF9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RNF216Q9NWF9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.13■■■□□ 2.41
RNF216Q9NWF9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.13■■■□□ 2.41
RNF216Q9NWF9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RNF216Q9NWF9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
RNF216Q9NWF9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
RNF216Q9NWF9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RNF216Q9NWF9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RNF216Q9NWF9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
RNF216Q9NWF9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RNF216Q9NWF9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.09■■■□□ 2.41
RNF216Q9NWF9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RNF216Q9NWF9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.07■■■□□ 2.4
RNF216Q9NWF9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
RNF216Q9NWF9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.06■■■□□ 2.4
RNF216Q9NWF9 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.06■■■□□ 2.4
RNF216Q9NWF9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RNF216Q9NWF9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RNF216Q9NWF9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.05■■■□□ 2.4
RNF216Q9NWF9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.05■■■□□ 2.4
RNF216Q9NWF9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.05■■■□□ 2.4
RNF216Q9NWF9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RNF216Q9NWF9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RNF216Q9NWF9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
RNF216Q9NWF9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RNF216Q9NWF9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RNF216Q9NWF9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RNF216Q9NWF9 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
RNF216Q9NWF9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
RNF216Q9NWF9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.99■■■□□ 2.39
RNF216Q9NWF9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RNF216Q9NWF9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
RNF216Q9NWF9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.97■■■□□ 2.39
RNF216Q9NWF9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
RNF216Q9NWF9 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
RNF216Q9NWF9 MIR762-201ENST00000390236 83 ntBASIC29.95■■■□□ 2.39
RNF216Q9NWF9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
RNF216Q9NWF9 AC005559.1-201ENST00000589661 871 ntBASIC29.93■■■□□ 2.38
RNF216Q9NWF9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RNF216Q9NWF9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
RNF216Q9NWF9 AC044849.2-201ENST00000606596 710 ntBASIC29.92■■■□□ 2.38
RNF216Q9NWF9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.91■■■□□ 2.38
RNF216Q9NWF9 NIFKP4-201ENST00000567275 1192 ntBASIC29.91■■■□□ 2.38
RNF216Q9NWF9 AC087741.3-201ENST00000624270 1347 ntBASIC29.91■■■□□ 2.38
RNF216Q9NWF9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RNF216Q9NWF9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.89■■■□□ 2.38
RNF216Q9NWF9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.89■■■□□ 2.38
RNF216Q9NWF9 DUX4L28-201ENST00000623687 678 ntBASIC29.89■■■□□ 2.38
RNF216Q9NWF9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.87■■■□□ 2.37
RNF216Q9NWF9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
RNF216Q9NWF9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.85■■■□□ 2.37
RNF216Q9NWF9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RNF216Q9NWF9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.84■■■□□ 2.37
RNF216Q9NWF9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RNF216Q9NWF9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.83■■■□□ 2.37
RNF216Q9NWF9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.83■■■□□ 2.37
RNF216Q9NWF9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RNF216Q9NWF9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
RNF216Q9NWF9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.82■■■□□ 2.36
RNF216Q9NWF9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
RNF216Q9NWF9 WASH5P-204ENST00000632292 975 ntBASIC29.82■■■□□ 2.36
RNF216Q9NWF9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RNF216Q9NWF9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC29.81■■■□□ 2.36
RNF216Q9NWF9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RNF216Q9NWF9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.8■■■□□ 2.36
RNF216Q9NWF9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RNF216Q9NWF9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
RNF216Q9NWF9 ABHD17AP4-201ENST00000411545 909 ntBASIC29.78■■■□□ 2.36
RNF216Q9NWF9 AC012183.1-201ENST00000625197 499 ntBASIC29.78■■■□□ 2.36
RNF216Q9NWF9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RNF216Q9NWF9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RNF216Q9NWF9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.75■■■□□ 2.35
RNF216Q9NWF9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RNF216Q9NWF9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RNF216Q9NWF9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RNF216Q9NWF9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RNF216Q9NWF9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RNF216Q9NWF9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RNF216Q9NWF9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.71■■■□□ 2.35
RNF216Q9NWF9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.7■■■□□ 2.35
RNF216Q9NWF9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RNF216Q9NWF9 MIR7108-201ENST00000614319 87 ntBASIC29.69■■■□□ 2.34
RNF216Q9NWF9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RNF216Q9NWF9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
RNF216Q9NWF9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RNF216Q9NWF9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RNF216Q9NWF9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.67■■■□□ 2.34
RNF216Q9NWF9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
RNF216Q9NWF9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.66■■■□□ 2.34
RNF216Q9NWF9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms