Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RNF216Q9NWF9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.18■■■□□ 2.42
RNF216Q9NWF9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RNF216Q9NWF9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RNF216Q9NWF9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.16■■■□□ 2.42
RNF216Q9NWF9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RNF216Q9NWF9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.15■■■□□ 2.42
RNF216Q9NWF9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.14■■■□□ 2.42
RNF216Q9NWF9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.14■■■□□ 2.42
RNF216Q9NWF9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RNF216Q9NWF9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RNF216Q9NWF9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.13■■■□□ 2.41
RNF216Q9NWF9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.13■■■□□ 2.41
RNF216Q9NWF9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RNF216Q9NWF9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
RNF216Q9NWF9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
RNF216Q9NWF9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RNF216Q9NWF9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RNF216Q9NWF9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
RNF216Q9NWF9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RNF216Q9NWF9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.09■■■□□ 2.41
RNF216Q9NWF9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RNF216Q9NWF9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.07■■■□□ 2.4
RNF216Q9NWF9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
RNF216Q9NWF9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.06■■■□□ 2.4
RNF216Q9NWF9 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.06■■■□□ 2.4
RNF216Q9NWF9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RNF216Q9NWF9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RNF216Q9NWF9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.05■■■□□ 2.4
RNF216Q9NWF9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.05■■■□□ 2.4
RNF216Q9NWF9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.05■■■□□ 2.4
RNF216Q9NWF9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RNF216Q9NWF9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RNF216Q9NWF9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
RNF216Q9NWF9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RNF216Q9NWF9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RNF216Q9NWF9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RNF216Q9NWF9 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
RNF216Q9NWF9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
RNF216Q9NWF9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.99■■■□□ 2.39
RNF216Q9NWF9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RNF216Q9NWF9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
RNF216Q9NWF9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.97■■■□□ 2.39
RNF216Q9NWF9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
RNF216Q9NWF9 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
RNF216Q9NWF9 MIR762-201ENST00000390236 83 ntBASIC29.95■■■□□ 2.39
RNF216Q9NWF9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
RNF216Q9NWF9 AC005559.1-201ENST00000589661 871 ntBASIC29.93■■■□□ 2.38
RNF216Q9NWF9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RNF216Q9NWF9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
RNF216Q9NWF9 AC044849.2-201ENST00000606596 710 ntBASIC29.92■■■□□ 2.38
RNF216Q9NWF9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.91■■■□□ 2.38
RNF216Q9NWF9 NIFKP4-201ENST00000567275 1192 ntBASIC29.91■■■□□ 2.38
RNF216Q9NWF9 AC087741.3-201ENST00000624270 1347 ntBASIC29.91■■■□□ 2.38
RNF216Q9NWF9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RNF216Q9NWF9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.89■■■□□ 2.38
RNF216Q9NWF9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.89■■■□□ 2.38
RNF216Q9NWF9 DUX4L28-201ENST00000623687 678 ntBASIC29.89■■■□□ 2.38
RNF216Q9NWF9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.87■■■□□ 2.37
RNF216Q9NWF9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
RNF216Q9NWF9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.85■■■□□ 2.37
RNF216Q9NWF9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RNF216Q9NWF9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.84■■■□□ 2.37
RNF216Q9NWF9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RNF216Q9NWF9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.83■■■□□ 2.37
RNF216Q9NWF9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.83■■■□□ 2.37
RNF216Q9NWF9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RNF216Q9NWF9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
RNF216Q9NWF9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.82■■■□□ 2.36
RNF216Q9NWF9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
RNF216Q9NWF9 WASH5P-204ENST00000632292 975 ntBASIC29.82■■■□□ 2.36
RNF216Q9NWF9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RNF216Q9NWF9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC29.81■■■□□ 2.36
RNF216Q9NWF9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RNF216Q9NWF9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.8■■■□□ 2.36
RNF216Q9NWF9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RNF216Q9NWF9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
RNF216Q9NWF9 ABHD17AP4-201ENST00000411545 909 ntBASIC29.78■■■□□ 2.36
RNF216Q9NWF9 AC012183.1-201ENST00000625197 499 ntBASIC29.78■■■□□ 2.36
RNF216Q9NWF9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RNF216Q9NWF9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RNF216Q9NWF9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.75■■■□□ 2.35
RNF216Q9NWF9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RNF216Q9NWF9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RNF216Q9NWF9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RNF216Q9NWF9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RNF216Q9NWF9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RNF216Q9NWF9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RNF216Q9NWF9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.71■■■□□ 2.35
RNF216Q9NWF9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.7■■■□□ 2.35
RNF216Q9NWF9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RNF216Q9NWF9 MIR7108-201ENST00000614319 87 ntBASIC29.69■■■□□ 2.34
RNF216Q9NWF9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RNF216Q9NWF9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
RNF216Q9NWF9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RNF216Q9NWF9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RNF216Q9NWF9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.67■■■□□ 2.34
RNF216Q9NWF9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
RNF216Q9NWF9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.66■■■□□ 2.34
RNF216Q9NWF9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms