RNA–Protein interactions for RNA: ENST00000335698.4

ATP5C1-201, Transcript of ATP synthase subunit gamma, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP5C1, Length 1,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5C1-201ENST00000335698 AEBP2Q6ZN18 517 aaPredicted RBP46.56■■■■■ 5.04
ATP5C1-201ENST00000335698 CHIC1Q5VXU3 224 aa44.05■■■■■ 4.64
ATP5C1-201ENST00000335698 SENP3Q9H4L4 574 aaPredicted RBP39.71■■■■□ 3.95
ATP5C1-201ENST00000335698 PHF23Q9BUL5 403 aaPredicted RBP39.16■■■■□ 3.86
ATP5C1-201ENST00000335698 FOXD1Q16676 465 aa37.05■■■■□ 3.52
ATP5C1-201ENST00000335698 PLPPR3Q6T4P5 718 aa35.1■■■■□ 3.21
ATP5C1-201ENST00000335698 MSH5O43196 834 aa34.71■■■■□ 3.15
ATP5C1-201ENST00000335698 PIAS4Q8N2W9 510 aaPredicted RBP34.55■■■■□ 3.12
ATP5C1-201ENST00000335698 PPP6R1Q9UPN7 881 aa34.52■■■■□ 3.12
ATP5C1-201ENST00000335698 ADRA2BP18089 450 aa34.38■■■■□ 3.09
ATP5C1-201ENST00000335698 POTEDQ86YR6 584 aa34.16■■■■□ 3.06
ATP5C1-201ENST00000335698 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
ATP5C1-201ENST00000335698 MAPK8IP2Q13387 824 aaPredicted RBP31.62■■■□□ 2.65
ATP5C1-201ENST00000335698 DMRT2Q9Y5R5 561 aa31.49■■■□□ 2.63
ATP5C1-201ENST00000335698 SCAF1Q9H7N4 1312 aaKnown RBP31.43■■■□□ 2.62
ATP5C1-201ENST00000335698 PPP4R3CPQ6ZMV5 832 aa30.75■■■□□ 2.51
ATP5C1-201ENST00000335698 HOXD11P31277 338 aaPredicted RBP30.27■■■□□ 2.44
ATP5C1-201ENST00000335698 CNKSR2Q8WXI2 1034 aa30.21■■■□□ 2.43
ATP5C1-201ENST00000335698 DCAF8L1A6NGE4 600 aa30.12■■■□□ 2.41
ATP5C1-201ENST00000335698 RNF216Q9NWF9 866 aaPredicted RBP29.99■■■□□ 2.39
ATP5C1-201ENST00000335698 CACNB1Q02641 598 aaPredicted RBP29.85■■■□□ 2.37
ATP5C1-201ENST00000335698 RNF39Q9H2S5 420 aa29.63■■■□□ 2.33
ATP5C1-201ENST00000335698 NCBP3Q53F19 620 aaKnown RBP29.49■■■□□ 2.31
ATP5C1-201ENST00000335698 DNAJC5BQ9UF47 199 aa29.28■■■□□ 2.28
ATP5C1-201ENST00000335698 C1QBPQ07021 282 aaKnown RBP29.17■■■□□ 2.26
ATP5C1-201ENST00000335698 NPM3O75607 178 aaKnown RBP29.11■■■□□ 2.25
ATP5C1-201ENST00000335698 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.78■■■□□ 2.21e-8■□□□□ 9.8
ATP5C1-201ENST00000335698 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
ATP5C1-201ENST00000335698 KCNA4P22459 653 aa28.41■■■□□ 2.14
ATP5C1-201ENST00000335698 U3KPZ7 1027 aaPredicted RBP28.22■■■□□ 2.11
ATP5C1-201ENST00000335698 ABCC9O60706 1549 aa27.89■■■□□ 2.06
ATP5C1-201ENST00000335698 SLC4A2P04920 1241 aa27.86■■■□□ 2.05
ATP5C1-201ENST00000335698 SPINK5Q9NQ38 1064 aaPredicted RBP27.84■■■□□ 2.05
ATP5C1-201ENST00000335698 CAPN15O75808 1086 aa27.76■■■□□ 2.03
ATP5C1-201ENST00000335698 DSG3P32926 999 aa27.69■■■□□ 2.02
ATP5C1-201ENST00000335698 APLP2Q06481 763 aa27.36■■□□□ 1.97
ATP5C1-201ENST00000335698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.31■■□□□ 1.96
ATP5C1-201ENST00000335698 HNRNPUL2Q1KMD3 747 aaKnown RBP27.31■■□□□ 1.96
ATP5C1-201ENST00000335698 TRHP20396 242 aaPredicted RBP27.27■■□□□ 1.96
ATP5C1-201ENST00000335698 ZNF219Q9P2Y4 722 aaPredicted RBP27.25■■□□□ 1.95
ATP5C1-201ENST00000335698 DCAF8L2P0C7V8 631 aa27.18■■□□□ 1.94
ATP5C1-201ENST00000335698 SAMD1Q6SPF0 538 aaPredicted RBP27.17■■□□□ 1.94
ATP5C1-201ENST00000335698 ABCB7O75027 752 aa27.11■■□□□ 1.93
ATP5C1-201ENST00000335698 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
ATP5C1-201ENST00000335698 MYCNP04198 464 aaPredicted RBP26.92■■□□□ 1.9
ATP5C1-201ENST00000335698 NACADO15069 1562 aa26.91■■□□□ 1.9
ATP5C1-201ENST00000335698 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
ATP5C1-201ENST00000335698 DCAF1Q9Y4B6 1507 aa26.82■■□□□ 1.88
ATP5C1-201ENST00000335698 MYO15BQ96JP2 1530 aa26.81■■□□□ 1.88
ATP5C1-201ENST00000335698 SLC4A1APQ9BWU0 796 aaKnown RBP26.76■■□□□ 1.87
ATP5C1-201ENST00000335698 POTEHQ6S545 545 aa26.73■■□□□ 1.87
ATP5C1-201ENST00000335698 FOXD4L1Q9NU39 408 aa26.56■■□□□ 1.84
ATP5C1-201ENST00000335698 POLA2Q14181 598 aa26.52■■□□□ 1.84
ATP5C1-201ENST00000335698 RBM42Q9BTD8 480 aaKnown RBP26.4■■□□□ 1.82
ATP5C1-201ENST00000335698 ATF5Q9Y2D1 282 aaPredicted RBP26.33■■□□□ 1.81
ATP5C1-201ENST00000335698 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
ATP5C1-201ENST00000335698 SCRIBQ14160 1630 aa26.24■■□□□ 1.79
ATP5C1-201ENST00000335698 PABPN1Q86U42 306 aaKnown RBP eCLIP26.18■■□□□ 1.78
ATP5C1-201ENST00000335698 ZBTB22O15209 634 aa26.15■■□□□ 1.78
ATP5C1-201ENST00000335698 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
ATP5C1-201ENST00000335698 ZBTB12Q9Y330 459 aaPredicted RBP25.98■■□□□ 1.75
ATP5C1-201ENST00000335698 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
ATP5C1-201ENST00000335698 CHRDL2Q6WN34 429 aa25.89■■□□□ 1.74
ATP5C1-201ENST00000335698 AKT1S1Q96B36 256 aa25.77■■□□□ 1.72
ATP5C1-201ENST00000335698 ATXN8OSP0DMR3 200 aa25.76■■□□□ 1.71
ATP5C1-201ENST00000335698 OSCARQ8IYS5 282 aa25.71■■□□□ 1.71
ATP5C1-201ENST00000335698 REM2Q8IYK8 340 aaPredicted RBP25.52■■□□□ 1.68
ATP5C1-201ENST00000335698 EIF4G1Q04637 1599 aaKnown RBP25.35■■□□□ 1.65
ATP5C1-201ENST00000335698 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
ATP5C1-201ENST00000335698 PITPNM1O00562 1244 aa25.27■■□□□ 1.64
ATP5C1-201ENST00000335698 FBLN2P98095 1184 aa25.26■■□□□ 1.63
ATP5C1-201ENST00000335698 PIP4P2Q8N4L2 257 aa25.25■■□□□ 1.63
ATP5C1-201ENST00000335698 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
ATP5C1-201ENST00000335698 SPDYE2BA6NHP3 402 aa25.18■■□□□ 1.62
ATP5C1-201ENST00000335698 SPDYE6P0CI01 402 aa25.18■■□□□ 1.62
ATP5C1-201ENST00000335698 SPDYE2Q495Y8 402 aa25.18■■□□□ 1.62
ATP5C1-201ENST00000335698 MKRN4PQ13434 485 aaPredicted RBP25.12■■□□□ 1.61
ATP5C1-201ENST00000335698 BAZ1AQ9NRL2 1556 aaPredicted RBP25.11■■□□□ 1.61
ATP5C1-201ENST00000335698 SMARCA4P51532 1647 aa25.1■■□□□ 1.61
ATP5C1-201ENST00000335698 FXR2P51116 673 aaKnown RBP eCLIP25.09■■□□□ 1.61
ATP5C1-201ENST00000335698 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
ATP5C1-201ENST00000335698 SP7Q8TDD2 431 aaPredicted RBP24.99■■□□□ 1.59
ATP5C1-201ENST00000335698 ATAD2BQ9ULI0 1458 aa24.93■■□□□ 1.58
ATP5C1-201ENST00000335698 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
ATP5C1-201ENST00000335698 NCAPD3P42695 1498 aa24.87■■□□□ 1.57
ATP5C1-201ENST00000335698 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
ATP5C1-201ENST00000335698 SSUH2Q9Y2M2 353 aa24.86■■□□□ 1.57
ATP5C1-201ENST00000335698 ZNF692Q9BU19 519 aaPredicted RBP24.82■■□□□ 1.56
ATP5C1-201ENST00000335698 PEG3Q9GZU2 1588 aa24.82■■□□□ 1.56
ATP5C1-201ENST00000335698 HAX1O00165 279 aa24.78■■□□□ 1.56
ATP5C1-201ENST00000335698 CSRNP3Q8WYN3 585 aa24.78■■□□□ 1.56
ATP5C1-201ENST00000335698 WIZO95785 1651 aa24.78■■□□□ 1.56
ATP5C1-201ENST00000335698 SPDYE1Q8NFV5 336 aaPredicted RBP24.76■■□□□ 1.55
ATP5C1-201ENST00000335698 BAZ1BQ9UIG0 1483 aaKnown RBP24.73■■□□□ 1.55
ATP5C1-201ENST00000335698 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
ATP5C1-201ENST00000335698 CLEC11AQ9Y240 323 aa24.7■■□□□ 1.54
ATP5C1-201ENST00000335698 PRKAR2AP13861 404 aaKnown RBP24.59■■□□□ 1.53
ATP5C1-201ENST00000335698 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
ATP5C1-201ENST00000335698 EVX2Q03828 476 aa24.52■■□□□ 1.52
ATP5C1-201ENST00000335698 TOP2AP11388 1531 aaKnown RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms