Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC38.12■■■■□ 3.69
ATP6V0A4Q9HBG4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
ATP6V0A4Q9HBG4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC37■■■■□ 3.51
ATP6V0A4Q9HBG4 AL356512.1-201ENST00000607453 1739 ntBASIC36.95■■■■□ 3.51
ATP6V0A4Q9HBG4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
ATP6V0A4Q9HBG4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.91■■■■□ 3.5
ATP6V0A4Q9HBG4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
ATP6V0A4Q9HBG4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.33■■■■□ 3.41
ATP6V0A4Q9HBG4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC36.25■■■■□ 3.39
ATP6V0A4Q9HBG4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.99■■■■□ 3.35
ATP6V0A4Q9HBG4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.92■■■■□ 3.34
ATP6V0A4Q9HBG4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.66■■■■□ 3.3
ATP6V0A4Q9HBG4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.63■■■■□ 3.29
ATP6V0A4Q9HBG4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.44■■■■□ 3.26
ATP6V0A4Q9HBG4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.44■■■■□ 3.26
ATP6V0A4Q9HBG4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.41■■■■□ 3.26
ATP6V0A4Q9HBG4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
ATP6V0A4Q9HBG4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.27■■■■□ 3.24
ATP6V0A4Q9HBG4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.22■■■■□ 3.23
ATP6V0A4Q9HBG4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC35.18■■■■□ 3.22
ATP6V0A4Q9HBG4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.94■■■■□ 3.18
ATP6V0A4Q9HBG4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.88■■■■□ 3.17
ATP6V0A4Q9HBG4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
ATP6V0A4Q9HBG4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
ATP6V0A4Q9HBG4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
ATP6V0A4Q9HBG4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
ATP6V0A4Q9HBG4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
ATP6V0A4Q9HBG4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.33■■■■□ 3.09
ATP6V0A4Q9HBG4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
ATP6V0A4Q9HBG4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
ATP6V0A4Q9HBG4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
ATP6V0A4Q9HBG4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.19■■■■□ 3.06
ATP6V0A4Q9HBG4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
ATP6V0A4Q9HBG4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.14■■■■□ 3.06
ATP6V0A4Q9HBG4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.1■■■■□ 3.05
ATP6V0A4Q9HBG4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC34.03■■■■□ 3.04
ATP6V0A4Q9HBG4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.01■■■■□ 3.04
ATP6V0A4Q9HBG4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.99■■■■□ 3.03
ATP6V0A4Q9HBG4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
ATP6V0A4Q9HBG4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.79■■■■□ 3
ATP6V0A4Q9HBG4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
ATP6V0A4Q9HBG4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
ATP6V0A4Q9HBG4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.74■■■□□ 2.99
ATP6V0A4Q9HBG4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.72■■■□□ 2.99
ATP6V0A4Q9HBG4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
ATP6V0A4Q9HBG4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.71■■■□□ 2.99
ATP6V0A4Q9HBG4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.67■■■□□ 2.98
ATP6V0A4Q9HBG4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.62■■■□□ 2.97
ATP6V0A4Q9HBG4 AC015813.7-201ENST00000623294 581 ntBASIC33.57■■■□□ 2.96
ATP6V0A4Q9HBG4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.54■■■□□ 2.96
ATP6V0A4Q9HBG4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.51■■■□□ 2.95
ATP6V0A4Q9HBG4 AC006077.2-201ENST00000623591 457 ntBASIC33.5■■■□□ 2.95
ATP6V0A4Q9HBG4 ZNRF2P1-201ENST00000441407 443 ntBASIC33.45■■■□□ 2.95
ATP6V0A4Q9HBG4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.45■■■□□ 2.95
ATP6V0A4Q9HBG4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.34■■■□□ 2.93
ATP6V0A4Q9HBG4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
ATP6V0A4Q9HBG4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
ATP6V0A4Q9HBG4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
ATP6V0A4Q9HBG4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.23■■■□□ 2.91
ATP6V0A4Q9HBG4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.2■■■□□ 2.91
ATP6V0A4Q9HBG4 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
ATP6V0A4Q9HBG4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
ATP6V0A4Q9HBG4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
ATP6V0A4Q9HBG4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
ATP6V0A4Q9HBG4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
ATP6V0A4Q9HBG4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
ATP6V0A4Q9HBG4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
ATP6V0A4Q9HBG4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.88■■■□□ 2.85
ATP6V0A4Q9HBG4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
ATP6V0A4Q9HBG4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
ATP6V0A4Q9HBG4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
ATP6V0A4Q9HBG4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
ATP6V0A4Q9HBG4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
ATP6V0A4Q9HBG4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
ATP6V0A4Q9HBG4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
ATP6V0A4Q9HBG4 AP002365.1-201ENST00000603448 772 ntBASIC32.62■■■□□ 2.81
ATP6V0A4Q9HBG4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
ATP6V0A4Q9HBG4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
ATP6V0A4Q9HBG4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.52■■■□□ 2.8
ATP6V0A4Q9HBG4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
ATP6V0A4Q9HBG4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
ATP6V0A4Q9HBG4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
ATP6V0A4Q9HBG4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
ATP6V0A4Q9HBG4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
ATP6V0A4Q9HBG4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
ATP6V0A4Q9HBG4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
ATP6V0A4Q9HBG4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.41■■■□□ 2.78
ATP6V0A4Q9HBG4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.41■■■□□ 2.78
ATP6V0A4Q9HBG4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
ATP6V0A4Q9HBG4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
ATP6V0A4Q9HBG4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.4■■■□□ 2.78
ATP6V0A4Q9HBG4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.37■■■□□ 2.77
ATP6V0A4Q9HBG4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
ATP6V0A4Q9HBG4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
ATP6V0A4Q9HBG4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.34■■■□□ 2.77
ATP6V0A4Q9HBG4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.34■■■□□ 2.77
ATP6V0A4Q9HBG4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.29■■■□□ 2.76
ATP6V0A4Q9HBG4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
ATP6V0A4Q9HBG4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.27■■■□□ 2.76
ATP6V0A4Q9HBG4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.26■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms