Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.87■■■■□ 3.49
NSUN3Q9H649 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.83■■■■□ 3.49
NSUN3Q9H649 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.35■■■■□ 3.41
NSUN3Q9H649 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
NSUN3Q9H649 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
NSUN3Q9H649 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.33■■■■□ 3.25
NSUN3Q9H649 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.24■■■■□ 3.23
NSUN3Q9H649 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.14■■■■□ 3.22
NSUN3Q9H649 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.12■■■■□ 3.21
NSUN3Q9H649 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
NSUN3Q9H649 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
NSUN3Q9H649 AL356512.1-201ENST00000607453 1739 ntBASIC34.95■■■■□ 3.19
NSUN3Q9H649 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.83■■■■□ 3.17
NSUN3Q9H649 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.79■■■■□ 3.16
NSUN3Q9H649 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
NSUN3Q9H649 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
NSUN3Q9H649 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.37■■■■□ 3.09
NSUN3Q9H649 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.32■■■■□ 3.09
NSUN3Q9H649 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.18■■■■□ 3.06
NSUN3Q9H649 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
NSUN3Q9H649 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.11■■■■□ 3.05
NSUN3Q9H649 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
NSUN3Q9H649 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.08■■■■□ 3.05
NSUN3Q9H649 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC34■■■■□ 3.03
NSUN3Q9H649 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
NSUN3Q9H649 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
NSUN3Q9H649 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.8■■■■□ 3
NSUN3Q9H649 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.73■■■□□ 2.99
NSUN3Q9H649 ZNRF2P1-201ENST00000441407 443 ntBASIC33.65■■■□□ 2.98
NSUN3Q9H649 AC006077.2-201ENST00000623591 457 ntBASIC33.63■■■□□ 2.97
NSUN3Q9H649 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.53■■■□□ 2.96
NSUN3Q9H649 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.53■■■□□ 2.96
NSUN3Q9H649 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
NSUN3Q9H649 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.36■■■□□ 2.93
NSUN3Q9H649 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
NSUN3Q9H649 AC015813.7-201ENST00000623294 581 ntBASIC33.26■■■□□ 2.91
NSUN3Q9H649 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.25■■■□□ 2.91
NSUN3Q9H649 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
NSUN3Q9H649 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.16■■■□□ 2.9
NSUN3Q9H649 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
NSUN3Q9H649 AP002365.1-201ENST00000603448 772 ntBASIC32.8■■■□□ 2.84
NSUN3Q9H649 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.77■■■□□ 2.84
NSUN3Q9H649 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
NSUN3Q9H649 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
NSUN3Q9H649 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NSUN3Q9H649 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
NSUN3Q9H649 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.54■■■□□ 2.8
NSUN3Q9H649 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
NSUN3Q9H649 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.52■■■□□ 2.8
NSUN3Q9H649 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.51■■■□□ 2.79
NSUN3Q9H649 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
NSUN3Q9H649 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.5■■■□□ 2.79
NSUN3Q9H649 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
NSUN3Q9H649 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
NSUN3Q9H649 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.39■■■□□ 2.78
NSUN3Q9H649 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.37■■■□□ 2.77
NSUN3Q9H649 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.36■■■□□ 2.77
NSUN3Q9H649 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.35■■■□□ 2.77
NSUN3Q9H649 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
NSUN3Q9H649 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
NSUN3Q9H649 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.25■■■□□ 2.75
NSUN3Q9H649 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.18■■■□□ 2.74
NSUN3Q9H649 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.15■■■□□ 2.74
NSUN3Q9H649 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
NSUN3Q9H649 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.09■■■□□ 2.73
NSUN3Q9H649 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
NSUN3Q9H649 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
NSUN3Q9H649 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.01■■■□□ 2.71
NSUN3Q9H649 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32■■■□□ 2.71
NSUN3Q9H649 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
NSUN3Q9H649 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
NSUN3Q9H649 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NSUN3Q9H649 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
NSUN3Q9H649 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
NSUN3Q9H649 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
NSUN3Q9H649 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
NSUN3Q9H649 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NSUN3Q9H649 DYNLL1-208ENST00000550178 581 ntBASIC31.89■■■□□ 2.7
NSUN3Q9H649 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NSUN3Q9H649 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NSUN3Q9H649 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.83■■■□□ 2.69
NSUN3Q9H649 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.81■■■□□ 2.68
NSUN3Q9H649 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
NSUN3Q9H649 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NSUN3Q9H649 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.76■■■□□ 2.67
NSUN3Q9H649 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NSUN3Q9H649 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
NSUN3Q9H649 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.73■■■□□ 2.67
NSUN3Q9H649 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
NSUN3Q9H649 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NSUN3Q9H649 AL031258.1-201ENST00000623562 325 ntBASIC31.64■■■□□ 2.66
NSUN3Q9H649 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NSUN3Q9H649 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
NSUN3Q9H649 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.57■■■□□ 2.64
NSUN3Q9H649 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.56■■■□□ 2.64
NSUN3Q9H649 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.56■■■□□ 2.64
NSUN3Q9H649 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NSUN3Q9H649 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
NSUN3Q9H649 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.51■■■□□ 2.63
NSUN3Q9H649 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms