Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
KRTAP4-3Q9BYR4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP4-3Q9BYR4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
KRTAP4-3Q9BYR4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP4-3Q9BYR4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP4-3Q9BYR4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC11.36□□□□□ -0.59
KRTAP4-3Q9BYR4 AL356512.1-201ENST00000607453 1739 ntBASIC11.34□□□□□ -0.59
KRTAP4-3Q9BYR4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
KRTAP4-3Q9BYR4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP4-3Q9BYR4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC10.98□□□□□ -0.65
KRTAP4-3Q9BYR4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP4-3Q9BYR4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC10.96□□□□□ -0.65
KRTAP4-3Q9BYR4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
KRTAP4-3Q9BYR4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC10.95□□□□□ -0.66
KRTAP4-3Q9BYR4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
KRTAP4-3Q9BYR4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
KRTAP4-3Q9BYR4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC10.88□□□□□ -0.67
KRTAP4-3Q9BYR4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC10.86□□□□□ -0.67
KRTAP4-3Q9BYR4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP4-3Q9BYR4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP4-3Q9BYR4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
KRTAP4-3Q9BYR4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
KRTAP4-3Q9BYR4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC10.75□□□□□ -0.69
KRTAP4-3Q9BYR4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-3Q9BYR4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-3Q9BYR4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-3Q9BYR4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP4-3Q9BYR4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP4-3Q9BYR4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC10.6□□□□□ -0.71
KRTAP4-3Q9BYR4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP4-3Q9BYR4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP4-3Q9BYR4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
KRTAP4-3Q9BYR4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC10.53□□□□□ -0.72
KRTAP4-3Q9BYR4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-3Q9BYR4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-3Q9BYR4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
KRTAP4-3Q9BYR4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-3Q9BYR4 AC015813.7-201ENST00000623294 581 ntBASIC10.42□□□□□ -0.74
KRTAP4-3Q9BYR4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
KRTAP4-3Q9BYR4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
KRTAP4-3Q9BYR4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
KRTAP4-3Q9BYR4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
KRTAP4-3Q9BYR4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC10.38□□□□□ -0.75
KRTAP4-3Q9BYR4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP4-3Q9BYR4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC10.37□□□□□ -0.75
KRTAP4-3Q9BYR4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP4-3Q9BYR4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP4-3Q9BYR4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-3Q9BYR4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP4-3Q9BYR4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP4-3Q9BYR4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
KRTAP4-3Q9BYR4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP4-3Q9BYR4 ZNRF2P1-201ENST00000441407 443 ntBASIC10.28□□□□□ -0.76
KRTAP4-3Q9BYR4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC10.27□□□□□ -0.76
KRTAP4-3Q9BYR4 AC006077.2-201ENST00000623591 457 ntBASIC10.27□□□□□ -0.77
KRTAP4-3Q9BYR4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC10.27□□□□□ -0.77
KRTAP4-3Q9BYR4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC10.24□□□□□ -0.77
KRTAP4-3Q9BYR4 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP4-3Q9BYR4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
KRTAP4-3Q9BYR4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP4-3Q9BYR4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
KRTAP4-3Q9BYR4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP4-3Q9BYR4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP4-3Q9BYR4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
KRTAP4-3Q9BYR4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-3Q9BYR4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-3Q9BYR4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC10.11□□□□□ -0.79
KRTAP4-3Q9BYR4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-3Q9BYR4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP4-3Q9BYR4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP4-3Q9BYR4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC10.08□□□□□ -0.8
KRTAP4-3Q9BYR4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-3Q9BYR4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-3Q9BYR4 AP002365.1-201ENST00000603448 772 ntBASIC10.07□□□□□ -0.8
KRTAP4-3Q9BYR4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC10.06□□□□□ -0.8
KRTAP4-3Q9BYR4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-3Q9BYR4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-3Q9BYR4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC10.02□□□□□ -0.81
KRTAP4-3Q9BYR4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP4-3Q9BYR4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP4-3Q9BYR4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
KRTAP4-3Q9BYR4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
KRTAP4-3Q9BYR4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
KRTAP4-3Q9BYR4 DYNLL1-208ENST00000550178 581 ntBASIC10.01□□□□□ -0.81
KRTAP4-3Q9BYR4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
KRTAP4-3Q9BYR4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC9.99□□□□□ -0.81
KRTAP4-3Q9BYR4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC9.99□□□□□ -0.81
KRTAP4-3Q9BYR4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP4-3Q9BYR4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP4-3Q9BYR4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP4-3Q9BYR4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP4-3Q9BYR4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
KRTAP4-3Q9BYR4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
KRTAP4-3Q9BYR4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
KRTAP4-3Q9BYR4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
KRTAP4-3Q9BYR4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC9.96□□□□□ -0.82
KRTAP4-3Q9BYR4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC9.96□□□□□ -0.82
KRTAP4-3Q9BYR4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
KRTAP4-3Q9BYR4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
KRTAP4-3Q9BYR4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms