Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.45■■■■□ 3.27
HAPLN3Q96S86 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
HAPLN3Q96S86 AL356512.1-201ENST00000607453 1739 ntBASIC34.5■■■■□ 3.11
HAPLN3Q96S86 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.48■■■■□ 3.11
HAPLN3Q96S86 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
HAPLN3Q96S86 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
HAPLN3Q96S86 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.03■■■■□ 3.04
HAPLN3Q96S86 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.01■■■■□ 3.03
HAPLN3Q96S86 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.68■■■□□ 2.98
HAPLN3Q96S86 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.56■■■□□ 2.96
HAPLN3Q96S86 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.45■■■□□ 2.95
HAPLN3Q96S86 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.39■■■□□ 2.94
HAPLN3Q96S86 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.34■■■□□ 2.93
HAPLN3Q96S86 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.14■■■□□ 2.9
HAPLN3Q96S86 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
HAPLN3Q96S86 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.84■■■□□ 2.85
HAPLN3Q96S86 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
HAPLN3Q96S86 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
HAPLN3Q96S86 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.62■■■□□ 2.81
HAPLN3Q96S86 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
HAPLN3Q96S86 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.78
HAPLN3Q96S86 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.43■■■□□ 2.78
HAPLN3Q96S86 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
HAPLN3Q96S86 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
HAPLN3Q96S86 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.11■■■□□ 2.73
HAPLN3Q96S86 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
HAPLN3Q96S86 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
HAPLN3Q96S86 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.98■■■□□ 2.71
HAPLN3Q96S86 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
HAPLN3Q96S86 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
HAPLN3Q96S86 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
HAPLN3Q96S86 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
HAPLN3Q96S86 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.64■■■□□ 2.66
HAPLN3Q96S86 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
HAPLN3Q96S86 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
HAPLN3Q96S86 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
HAPLN3Q96S86 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
HAPLN3Q96S86 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.59■■■□□ 2.65
HAPLN3Q96S86 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
HAPLN3Q96S86 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
HAPLN3Q96S86 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
HAPLN3Q96S86 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.53■■■□□ 2.64
HAPLN3Q96S86 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.48■■■□□ 2.63
HAPLN3Q96S86 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
HAPLN3Q96S86 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
HAPLN3Q96S86 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
HAPLN3Q96S86 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.4■■■□□ 2.62
HAPLN3Q96S86 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
HAPLN3Q96S86 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
HAPLN3Q96S86 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
HAPLN3Q96S86 AC015813.7-201ENST00000623294 581 ntBASIC31.11■■■□□ 2.57
HAPLN3Q96S86 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.08■■■□□ 2.57
HAPLN3Q96S86 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
HAPLN3Q96S86 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
HAPLN3Q96S86 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
HAPLN3Q96S86 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.87■■■□□ 2.53
HAPLN3Q96S86 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
HAPLN3Q96S86 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
HAPLN3Q96S86 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
HAPLN3Q96S86 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.79■■■□□ 2.52
HAPLN3Q96S86 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.77■■■□□ 2.52
HAPLN3Q96S86 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.72■■■□□ 2.51
HAPLN3Q96S86 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
HAPLN3Q96S86 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
HAPLN3Q96S86 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
HAPLN3Q96S86 AC006077.2-201ENST00000623591 457 ntBASIC30.62■■■□□ 2.49
HAPLN3Q96S86 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
HAPLN3Q96S86 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
HAPLN3Q96S86 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
HAPLN3Q96S86 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
HAPLN3Q96S86 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
HAPLN3Q96S86 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
HAPLN3Q96S86 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
HAPLN3Q96S86 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.5■■■□□ 2.47
HAPLN3Q96S86 ZNRF2P1-201ENST00000441407 443 ntBASIC30.44■■■□□ 2.46
HAPLN3Q96S86 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
HAPLN3Q96S86 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.41■■■□□ 2.46
HAPLN3Q96S86 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
HAPLN3Q96S86 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
HAPLN3Q96S86 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.36■■■□□ 2.45
HAPLN3Q96S86 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
HAPLN3Q96S86 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
HAPLN3Q96S86 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
HAPLN3Q96S86 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
HAPLN3Q96S86 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
HAPLN3Q96S86 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
HAPLN3Q96S86 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
HAPLN3Q96S86 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
HAPLN3Q96S86 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
HAPLN3Q96S86 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
HAPLN3Q96S86 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
HAPLN3Q96S86 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
HAPLN3Q96S86 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.06■■■□□ 2.4
HAPLN3Q96S86 AC145285.7-201ENST00000614819 1539 ntBASIC30.06■■■□□ 2.4
HAPLN3Q96S86 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
HAPLN3Q96S86 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.04■■■□□ 2.4
HAPLN3Q96S86 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.04■■■□□ 2.4
HAPLN3Q96S86 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
HAPLN3Q96S86 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
HAPLN3Q96S86 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms